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Morphological and molecular characterizations of Pratylenchus coffeae infecting Ming aralia and coffee in Vietnam


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Fig. 1.

Light microscopy pictures of Pratylenchus coffeae from this study. A-D, F-H: Female. A: Entire body, B: Anterior part of the body showing lip and pharynx region; C: Anterior end region; D: Tail region; F: Lateral field at mid-body; G: Vulva region showing spermatheca; H: vulva and post-uterine sac. E: Tail region of the male. (Scale bar: A: 50 μm; B-H: 10 μm).
Light microscopy pictures of Pratylenchus coffeae from this study. A-D, F-H: Female. A: Entire body, B: Anterior part of the body showing lip and pharynx region; C: Anterior end region; D: Tail region; F: Lateral field at mid-body; G: Vulva region showing spermatheca; H: vulva and post-uterine sac. E: Tail region of the male. (Scale bar: A: 50 μm; B-H: 10 μm).

Fig. 2.

Cluster and MDS analyses of Pratylenchus coffeae from 17 populations in the world.
Cluster and MDS analyses of Pratylenchus coffeae from 17 populations in the world.

Fig. 3.

Bayesian phylogenetic tree of Pratylenchus species generated from D2D3 of 28S rRNA genes using the HKY+G model. Posterior Probability support was given next to each node. The sequences from this study were marked by red and bold.
Bayesian phylogenetic tree of Pratylenchus species generated from D2D3 of 28S rRNA genes using the HKY+G model. Posterior Probability support was given next to each node. The sequences from this study were marked by red and bold.

Fig. 4.

Bayesian phylogenetic tree of Pratylenchus species generated from COI mtDNA genes using the HKY+G model. Posterior Probability support was given next to each node. The sequences from this study were marked by red and bold.
Bayesian phylogenetic tree of Pratylenchus species generated from COI mtDNA genes using the HKY+G model. Posterior Probability support was given next to each node. The sequences from this study were marked by red and bold.

Measurements of Pratylenchus coffeae from Ming aralia and coffee in Vietnam.

Characters Pratylenchus coffeae (Zimmermann, 1898) Filipjev & Schuurmans Stekhoven, 1941

Host plant Ming aralia Coffee

Sex Female Male Female Male
n 10 10 10 10
a 23 ± 2.4 (22 – 28) 28.6 ± 1.2 (27.6 – 30.7) 27 ± 1.4 (25.5 – 29.1) 31 ± 2.9 (25.9 – 36.4)
b 6.0 ± 0.3 (5.7 – 6.5) 5.9 ± 0.2 (5.7 – 6.2) 6 ± 0.3 (5.7 – 6.5) 6 ± 0.3 (5.7 – 6.4)
b′ 4.2 ± 0.2 (4.1 – 4.5) 4.2 ± 0.2 (4 – 4.6) 4 ± 0.2 (3.8 – 4.4) 4.2 ± 0.2 (3.8 – 4.5)
c 18.8 ± 0.5 (18.3 – 19.6) 19.5 ± 1.4 (18.3 – 21) 19.2 ± 1.4 (17.4 – 22) 20 ± 1.5 (18.5 – 23)
c′ 1. 9 ± 0.1 (1.7 – 2.1) 2.3 ± 0.2 (2 – 2.7) 2.2 ± 0.2 (1.9 – 2.5) 2.1 ± 0.2 (1.9 – 2.4)
Body length (L) 519 ± 25 (485 – 550) 497 ± 24 (476 – 542) 473 ± 28 (440 – 531) 494 ± 26.7 (454 – 533)
V 79 ± 3 (74 – 82) 80 ± 2 (78 – 84)
Stylet length 15.9 ± 0.2 (15.7 – 16.1) 14.5 ± 0.3 (13.9 – 14.9) 15.9 ± 0.4 (15.3 – 16.6) 14.7 ± 0.8 (13.8 – 16)
Dorsal gland opening from stylet base (DGO) 3.2 ± 0.7 (2.2 – 3.9) 3.3 ± 0.3 (2.9 – 3.6) 2.9 ± 0.4 (2.3 – 3.3) 3.1 ± 0.4 (2.5 – 3.7)
Anterior end to valve of median bulb 56 ± 3 (52 – 58) 53 ± 1.4 (52 – 55) 50 ± 3.4 (46 – 58) 52 ± 1.8 (49 – 55)
Anterior end to nerve ring 70 ± 3.3 (64 – 72) 65 ± 3 (63 – 69) 61 ± 4 (57 – 70) 64 ± 2 (61 – 68)
Anterior end to secretory-excretory pore 80 ± 2 (78 – 82) 76 ± 3 (72 – 79) 75 ± 5 (69 – 81) 76 ± 2 (72 – 79)
Anterior end to pharyngo-intestinal junction 87 ± 5 (79 – 91) 84 ± 2 (81 – 87) 79 ± 5 (74 – 89) 82 ± 4 (74 – 86)
Anterior end to end of pharyngeal gland 123 ± 8 (109 – 129) 118 ± 6 (108 – 124) 117 ± 5 (109 – 123) 119 ± 7 (109 – 127)
Pharyngeal gland overlap 36 ± 4 (30 – 39) 34 ± 5 (27 – 42) 38 ± 4 (31 – 44) 37 ± 4 (31 – 43)
Max body diam. 22 ± 1.5 (20 – 24) 17.4 ± 0.7 (16.3 – 18.5) 17.5 ± 1 (16.2 – 19.3) 16.1 ± 2.1 (13.6 – 19.6)
Vulval body diam. 19.9 ± 1 (19 – 22) 16.3 ± 1.4 (14.4 – 19.4)
Post-uterine sac (PUS) 21 ± 4 (16.4 – 26) 27 ± 2 (24 – 30)
Anal body diam. 14.7 ± 0.3 (14.3 – 15) 11 ± 0.4 (10.3 – 11.6) 11.3 ± 0.4 (10.7 – 12) 11.4 ± 1 (10.1 – 12.9)
Tail length 28 ± 2 (25 – 30) 26 ± 2 (23 – 30) 25 ± 2 (21 – 27) 24 ± 2 (21 – 28)
Spicule length 18.4 ± 1 (17.2 – 19.9) 17.8 ± 1 (16.1 – 19.3)
Gubernaculum length 4.5 ± 0.3 (3.9 – 4.8) 4.3 ± 0.6 (3.5 – 5.5)
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Life Sciences, Zoology, Ecology, other, Medicine, Clinical Medicine, Microbiology, Virology and Infection Epidemiology