N/AA (%) | MN122335.1 | MK159169.1 | OK032546.2 | EU794907.1 | MN480761.1 | MZ573179.1 | NC029645.1 | AF097917.5 | AY126474.2 | |
---|---|---|---|---|---|---|---|---|---|---|
Complete genome | 93.06/98.19 | 86.25/94.83 | 85.84/90.56 | 84.97/95.50 | 93.46/98.19 | 93.70/98.37 | 86.6/95.940 | 85.46/95.76 | 85.33/95.57 | |
ORF1 | P48 | 93.81/96.96 | 93.01/96.35 | 94.02/97.26 | 81.68/89.97 | 94.22/97.26 | 93.52/97.57 | 84.40/93.31 | 81.05/91.19 | 82.14/91.19 |
NTPase | 93.74/99.17 | 93.65/99.17 | 94.20/99.45 | 84.90/98.62 | 94.57/100 | 94.66/99.72 | 86.00/98.62 | 87.38/98.90 | 85.82/99.17 | |
p22 | 91.85/97.83 | 92.21/98.91 | 92.39/97.83 | 85.35/97.25 | 89.41/94.57 | 93.12/97.83 | 86.31/96.72 | 84.22/97.25 | 86.28/97.25 | |
VPg | 95.08/99.18 | 94.54/98.36 | 94.81/97.54 | 83.88/94.26 | 93.72/100 | 92.90/97.54 | 88.71/95.87 | 85.21/95.08 | 84.25/94.21 | |
Pro | 94.27/99.44 | 94.29/99.45 | 93.92/100 | 85.27/98.34 | 97.24/100 | 95.21/100 | 86.74/97.79 | 86.56/98.34 | 85.82/98.34 | |
RdRp | 94.66/99.41 | 94.73/99.41 | 93.74/98.62 | 86.76/97.63 | 94.66/99.41 | 94.66/98.81 | 89.53/98.81 | 85.97/97.63 | 86.17/97.43 | |
ORF2 | VP1 | 91.39/96.74 | 69.78/70.36 | 68.39/70.36 | 85.59/94.83 | 92.10/97.51 | 92.93/98.28 | 85.91/94.25 | 86.93/94.25 | 86.11/94.83 |
ORF3 | VP2 | 91.69/96.76 | 92.77/96.62 | 66.62/63.43 | 84.62/93.06 | 91.54/96.76 | 91.69/97.22 | 84.92/92.13 | 84.92/93.46 | 85.56/92.13 |
Season | Region | Total (n=974) | ||||||||
---|---|---|---|---|---|---|---|---|---|---|
Spring |
Summer |
Autumn |
Winter |
Tacheng |
Bortara |
IlI |
Kashga |
Urumuq |
Changji |
|
25 (9.12%) | 64 (20.58%) | 73 (43.98%) | 31 (13.72%) | 9 (60%) | 20 (13.07%) | 51 (27.13%) | 92 (21.70%) | 2 (4.55%) | 19 (12.67%) | 193 (19.82%) |
N/AA (%) | MN122335.1 | MK159169.1 | OK032546.2 | EU794907.1 | MN480761.1 | MZ573179.1 | NC029645.1 | AF097917.5 | AY126474.2 | |
---|---|---|---|---|---|---|---|---|---|---|
Complete genome | 93.48/96.78 | 92.40/90.57 | 86.60/90.64 | 84.88/95.06 | 92.81/97.35 | 92.74/97.60 | 86.36/95.42 | 85.45/95.41 | 84.97/95.38 | |
ORF1 | P48 | 95.03/96.66 | 93.62/96.05 | 95.04/96.96 | 80.79/88.75 | 93.41/96.96 | 93.11/97.26 | 83.79/93.31 | 81.19/90.58 | 81.26/90.58 |
NTPase | 93.55/98.34 | 93.28/97.79 | 95.30/98.62 | 84.16/97.51 | 93.74/98.62 | 93.46/98.34 | 85.36/97.24 | 85.45/97.79 | 84.44/98.07 | |
p22 | 91.85/97.28 | 93.48/98.37 | 94.20/97.28 | 85.71/97.80 | 89.05/94.57 | 92.21/98.37 | 84.31/96.17 | 84.22/97.80 | 85.90/96.70 | |
VPg | 94.81/97.54 | 94.26/97.54 | 93.44/96.72 | 82.51/93.44 | 94.54/98.36 | 91.53/95.90 | 88.80/95.87 | 83.84/94.26 | 83.29/93.39 | |
Pro | 94.09/98.89 | 95.03/99.45 | 94.11/99.45 | 85.58/98.34 | 94.48/99.45 | 94.11/99.45 | 85.56/97.24 | 87.43/98.34 | 87.29/98.34 | |
RdRp | 94.80/99.20 | 95.13/99.20 | 94.40/98.41 | 87.17/97.61 | 93.87/99.20 | 93.81/99.00 | 88.47/98.80 | 86.77/97.61 | 85.51/97.41 | |
ORF2 | VP1 | 92.22/97.89 | 79.37/71.32 | 69.02/70.94 | 85.85/95.79 | 91.78/96.74 | 91.20/97.13 | 86.93/94.44 | 87.76/94.83 | 86.62/95.98 |
ORF3 | VP2 | 91.55/94.44 | 69.30/64.81 | 67.88/65.74 | 85.25/91.20 | 91.72/94.91 | 91.86/95.37 | 86.33/90.28 | 84.49/92.06 | 85.43/92.59 |