[
Amodio N., Raimondi L., Juli G., Stamato M.A., Caracciolo D., Tagliaferri P., Tassone P. (2018). MALAT1: A druggable long non-coding RNA for targeted anti-cancer approaches. J. Hematol. Oncol., 11: 1–19.
]Search in Google Scholar
[
Carter S., Miard S., Boivin L., Sallé-Lefort S., Picard F. (2018). Loss of Malat1 does not modify age- or diet-induced adipose tissue accretion and insulin resistance in mice. PLoS One, 13.10.1371/journal.pone.0196603594498729746487
]Search in Google Scholar
[
Chen H., Mo D., Li M, Zhang Y., Chen L., Zhang X., Li M., Zhou X., Chen Y. (2014). MiR-709 inhibits 3T3-L1 cell differentiation by targeting GSK3β of Wnt/β-catenin signaling. Cell. Signal., 26: 2583–2589.
]Search in Google Scholar
[
Cheng L., Nan C., Kang L., Zhang N., Liu S., Chen H., Hong C., Chen Y., Liang Z., Liu X. (2020). Whole blood transcriptomic investigation identifies long non-coding RNAs as regulators in sepsis. J. Transl. Med., 18: 217.
]Search in Google Scholar
[
Chessler S.D., Fujimoto W.Y., Shofer J.B., Boyko E.J., Weigle D.S. (1998). Increased plasma leptin levels are associated with fat accumulation in Japanese Americans. Diabetes, 47: 239–243.
]Search in Google Scholar
[
Deming Y., Li Z., Kapoor M., Harari O., Del -Aguila J.L., Black K., Carrell D., Cai Y., Fernandez M.V., Budde J., Ma S., Saef B., Howells B., Huang K. lin, Bertelsen S., Fagan A.M., Holtzman D.M., Morris J.C., Kim S., Saykin A.J., De Jager P.L., Albert M., Moghekar A., O’Brien R., Riemenschneider M., Petersen R.C., Blennow K., Zetterberg H., Minthon L., Van Deerlin V.M., Lee V.M.Y., Shaw L.M., Trojanowski J.Q., Schellenberg G., Haines J.L., Mayeux R., Pericak-Vance M.A., Farrer L.A., Peskind E.R., Li G., Di Narzo A.F., Kauwe J.S.K., Goate A.M., Cruchaga C. (2017). Genome-wide association study identifies four novel loci associated with Alzheimer’s endophenotypes and disease modifiers. Acta Neuropathol., 133: 839–856.
]Search in Google Scholar
[
Du J., Xu Y., Zhang P., Zhao X., Gan M., Li Q., Ma J., Tang G., Jiang Y., Wang J., Li X., Zhang S., Zhu L. (2018). MicroRNA-125a-5p Affects Adipocytes Proliferation, Differentiation and Fatty Acid Composition of Porcine Intramuscular Fat. Int. J. Mol. Sci., 19: 501.
]Search in Google Scholar
[
Ebrahimi R., Toolabi K., Jannat Ali Pour N., Mohassel Azadi S., Bahiraee A., Zamani-Garmsiri F., Emamgholipour S. (2020). Adipose tissue gene expression of long non-coding RNAs; MALAT1, TUG1 in obesity: Is it associated with metabolic profile and lipid homeostasis-related genes expression? Diabetol. Metab. Syndr., 12: 36.
]Search in Google Scholar
[
Eißmann M., Gutschner T., Hämmerle M., Günther S., Caudron -Herger M., Groß M., Schirmacher P., Rippe K., Braun T., Zörnig M., Diederichs S. (2012). Loss of the abundant nuclear non-coding RNA MALAT1 is compatible with life and development. RNA Biol., 9: 1076–1087.
]Search in Google Scholar
[
Foote A.P., Hales K.E., Kuehn L.A., Keisler D.H., King D.A., Shackelford S.D., Wheeler T.L., Freetly H.C. (2015). Relationship of leptin concentrations with feed intake, growth, and efficiency in finishing beef steers. J. Anim. Sci., 93: 4401–4407.
]Search in Google Scholar
[
Goyenechea E., Crujeiras A.B., Abete I., Martínez J.A. (2009). Expression of two inflammation-related genes (RIPK3 and RNF216) in mononuclear cells is associated with weight-loss regain in obese subjects. J. Nutrigenet. Nutrigenomics, 2: 78–84.
]Search in Google Scholar
[
Gutschner T., Hämmerle M., Eißmann M., Hsu J., Kim Y., Hung G., Revenko, A., Arun G., Stentrup M., Groß M., Zörnig M., MacLeod A.R., Spector D.L., Diederichs S. (2013). The noncoding RNA MALAT1 is a critical regulator of the metastasis phenotype of lung cancer cells. Cancer Res., 73: 1180–1189.
]Search in Google Scholar
[
Hou L., Shi J., Cao L., Xu G., Hu C., Wang C. (2017). Pig has no uncoupling protein 1. Biochem. Biophys. Res. Commun., 487: 795–800.
]Search in Google Scholar
[
Iacomino G., Siani A. (2017). Role of microRNAs in obesity and obesity-related diseases. Genes Nutr., 12.10.1186/s12263-017-0577-z561346728974990
]Search in Google Scholar
[
Ji P., Diederichs S., Wang W., Böing S., Metzger R., Schneider P.M., Tidow N., Brandt B., Buerger H., Bulk E., Thomas M., Berdel W.E., Serve H., Müller-Tidow C. (2003). MALAT-1, a novel noncoding RNA, and thymosin β4 predict metastasis and survival in early-stage non-small cell lung cancer. Oncogene, 22: 8031–8041.
]Search in Google Scholar
[
Jia P., Wu N., Jia D., Sun Y. (2019). Downregulation of MALAT1 alleviates saturated fatty acid-induced myocardial inflammatory injury via the miR-26a/HMGB1/TLR4/NF-κB axis. Diabetes, Metab. Syndr. Obes. Targets Ther., 12: 655–665.
]Search in Google Scholar
[
Johnson R., Guigó R. (2014). The RIDL hypothesis: Transposable elements as functional domains of long noncoding RNAs. RNA, 20: 959–976.
]Search in Google Scholar
[
Joshi H., Vastrad B.M., Joshi N. (2020). Distinct Molecular Mechanisms Analysis of Obesity Based on Gene Expression Proles. Res. Sq.
]Search in Google Scholar
[
Kim J., Piao H.L., Kim B.J., Yao F., Han Z., Wang Y., Xiao Z., Siverly A.N., Lawhon S.E., Ton B.N., Lee H., Zhou Z., Gan B., Nakagawa S., Ellis M.J., Liang H., Hung M.C., You M.J., Su, Y., Ma L. (2018). Long noncoding RNA MALAT1 suppresses breast cancer metastasis. Nat. Genet., 50: 1705–1715.
]Search in Google Scholar
[
Kurył J., Kapelański W., Pierzchała M., Bocian M., Grajewska S. (2003). A relationship between genotypes at the GH and LEP loci and carcass meat and fat deposition in pigs. Anim. Sci. Pap. Reports, 21: 15–26.
]Search in Google Scholar
[
Liu L., Tan L., Yao J., Yang L. (2020). Long non-coding RNA MALAT1 regulates cholesterol accumulation in ox-LDL-induced macrophages via the microRNA-17-5p/ABCA1 axis. Mol. Med. Rep., 21: 1761–1770.
]Search in Google Scholar
[
Liu X., Li D., Zhang D., Yin D., Zhao Y., Ji C., Zhao X., Li X., He Q., Chen R., Hu S., Zhu L. (2018). A novel antisense long noncoding RNA, TWISTED LEAF, maintains leaf blade flattening by regulating its associated sense R2R3-MYB gene in rice. New Phytol., 218: 774–788.
]Search in Google Scholar
[
Love M.I., Huber W., Anders S. (2014). Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biol., 15.10.1186/s13059-014-0550-8430204925516281
]Search in Google Scholar
[
Mann M., Wright P.R., Backofen R. (2017). IntaRNA 2.0: Enhanced and customizable prediction of RNA-RNA interactions. Nucleic Acids Res., 45: W435–W439.
]Search in Google Scholar
[
Perdomo G., Kim D.H., Zhang T., Qu S., Thomas E.A., Toledo F.G.S., Slusher S., Fan Y., Kelley D.E., Dong H.H. (2010). A role of apolipoprotein D in triglyceride metabolism. J. Lipid Res., 51: 1298–1311.
]Search in Google Scholar
[
Pfaffl M.W., Tichopad A., Prgomet C., Neuvians T.P. (2004). Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper - Excel-based tool using pair-wise correlations. Biotechnol. Lett., 26: 509–515.
]Search in Google Scholar
[
Piórkowska K., Ropka-Molik K., Eckert R., Rózycki M. (2013). The expression pattern of proteolytic enzymes of cathepsin family in two important porcine skeletal muscles. Livest. Sci., 157: 427–434.
]Search in Google Scholar
[
Ropka-Molik K., Pawlina-Tyszko K., Żukowski K., Tyra M., Derebecka N., Wesoły J., Szmatoła T., Piórkowska K., 2020. Identification of Molecular Mechanisms Related to Pig Fatness at the Transcriptome and miRNAome Levels. Genes (Basel)., 11: 600.10.3390/genes11060600734875632485856
]Search in Google Scholar
[
Scoville D.W., Kang H.S., Jetten A.M. (2017). GLIS1-3: Emerging roles in reprogramming, stem and progenitor cell differentiation and maintenance. Stem Cell Investig., 4.10.21037/sci.2017.09.01563901129057252
]Search in Google Scholar
[
Sindhu S., Akhter N., Kochumon S., Thomas R., Wilson A., Shenouda S., Tuomilehto J., Ahmad R. (2018). Increased Expression of the Innate Immune Receptor TLR10 in Obesity and Type-2 Diabetes: Association with ROS-Mediated Oxidative Stress. Cell. Physiol. Biochem., 45: 572–590.
]Search in Google Scholar
[
Singh D.K., Prasanth K. V. (2013). Functional insights into the role of nuclear-retained long noncoding RNAs in gene expression control in mammalian cells. Chromosom. Res., 21: 695–711.
]Search in Google Scholar
[
Singh U.P., Singh N.P., Murphy E.A., Singh S.K., Price R.L., Nagarkatti M., Nagarkatti P.S. (2018). Adipose T cell microRNAs influence the T cell expansion, microbiome and macrophage function during obesity. J. Immunol., 200.
]Search in Google Scholar
[
Skorobogatko Y., Dragan M., Cordon C., Reilly S.M., Hung C.W., Xia W., Zhao P., Wallace M., Lackey D.E., Chen X.W., Osborn O., Bogner -Strauss J.G., Theodorescu D., Metallo C.M., Olefsky J.M., Saltiel A.R., 2018. RalA controls glucose homeostasis by regulating glucose uptake in brown fat. Proc. Natl. Acad. Sci. U. S. A., 115: 7819–7824.10.1073/pnas.1801050115606503729915037
]Search in Google Scholar
[
Song W., Chen Y.P., Huang R., Chen K., Pan P.L., Li J., Yang Y., Shang H.F. (2012). GLIS1 rs797906: An increased risk factor for late-onset Parkinson’s disease in the han Chinese population. Eur. Neurol., 68: 89–92.
]Search in Google Scholar
[
Song Z., Cooper D.K.C., Cai Z., Mou L. (2018). Expression and regulation profile of mature microRNA in the pig: Relevance to xenotransplantation. Biomed Res. Int. 2018.10.1155/2018/2983908588440329750148
]Search in Google Scholar
[
Takahashi, K., Sakurai, N., Emura, N., Hashizume, T., Sawai, K., 2015. Effects of downregulating GLIS1 transcript on preimplantation development and gene expression of bovine embryos. J. Reprod. Dev., 61: 369–374.10.1262/jrd.2015-029462314126074126
]Search in Google Scholar
[
Tosic M., Allen A., Willmann D., Lepper C., Kim J., Duteil D., Schüle R. (2018). Lsd1 regulates skeletal muscle regeneration and directs the fate of satellite cells. Nat. Commun., 9.10.1038/s41467-017-02740-5578554029371665
]Search in Google Scholar
[
Tripathi V., Ellis J.D., Shen Z., Song D.Y., Pan Q., Watt A.T., Freier S.M., Bennett C.F., Sharma A., Bubulya P.A., Blencowe B.J., Prasanth S.G., Prasanth K. V. (2010). The nuclear-retained noncoding RNA MALAT1 regulates alternative splicing by modulating SR splicing factor phosphorylation. Mol. Cell, 39: 925–938.
]Search in Google Scholar
[
Xia S.F., Duan X.M., Cheng X.R., Chen L.M., Kang Y.J., Wang P., Tang X., Shi Y.H., Le G.W. (2017). Role of miR-383 and miR-146b in different propensities to obesity in male mice. J. Endocrinol., 234: 201–216.
]Search in Google Scholar
[
Xu Y., Du J., Zhang P., Zhao X., Li Q., Jiang A., Jiang D., Tang G., Jiang Y., Wang J., Li X., Zhang S., Zhu L. (2018). MicroRNA-125a-5p Mediates 3T3-L1 Preadipocyte Proliferation and Differentiation. Molecules, 23: 317.
]Search in Google Scholar
[
Yan C., Chen J., Chen N. (2016). Long noncoding RNA MALAT1 promotes hepatic steatosis and insulin resistance by increasing nuclear SREBP-1c protein stability. Sci. Rep., 6: 1–11.
]Search in Google Scholar
[
Zhang B., Arun G., Mao Y.S., Lazar Z., Hung G., Bhattacharjee G., Xiao X., Booth C.J., Wu J., Zhang C., Spector D.L. (2012). The lncRNA malat1 is dispensable for mouse development but its transcription plays a cis-regulatory role in the adult. Cell Rep., 2: 111–123.
]Search in Google Scholar
[
Zhang X., Wang W., Zhu W., Dong J., Cheng Y., Yin Z., Shen F. (2019). Mechanisms and functions of long non-coding RNAs at multiple regulatory levels. Int. J. Mol. Sci., 20.10.3390/ijms20225573688808331717266
]Search in Google Scholar
[
Zhang X., Zhou Y., Chen S., Li W., Chen W., Gu W. (2019). LncRNA MACC1-AS1 sponges multiple miRNAs and RNA-binding protein PTBP1. Oncogenesis, 8: 1–13.
]Search in Google Scholar
[
Zhu Y.-L., Chen T., Xiong J.-L., Wu D., Xi Q.-Y., Luo J.-Y., Sun J.-J., Zhang Y.-L. (2018). miR-146b Inhibits Glucose Consumption by Targeting IRS1 Gene in Porcine Primary Adipocytes. Int. J. Mol. Sci., 19: 783.
]Search in Google Scholar