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Journal of Veterinary Research
Volume 66 (2022): Numero 3 (September 2022)
Accesso libero
Characterisation of ORF3, M, N and E gene sequences of porcine epidemic diarrhoea virus from domestic pigs in Poland
Monika Olech
Monika Olech
,
Marta Antas
Marta Antas
e
Anna Szczotka-Bochniarz
Anna Szczotka-Bochniarz
| 30 set 2022
Journal of Veterinary Research
Volume 66 (2022): Numero 3 (September 2022)
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CONDIVIDI
Pubblicato online:
30 set 2022
Pagine:
317 - 324
Ricevuto:
24 apr 2022
Accettato:
12 set 2022
DOI:
https://doi.org/10.2478/jvetres-2022-0051
Parole chiave
porcine epidemic diarrhoea virus
,
E gene
,
M gene
,
N gene
,
ORF3
,
phylogenetic analysis
© 2022 M. Olech et al. published by Sciendo
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.
Fig. 1
Phylogenetic relationship between the sequences of PEDV Polish strains and sequences of reference strains obtained from GenBank. The phylogenetic trees were constructed on the basis of the ORF3 (a) and E (b) nucleotide sequences with MEGA6 software using the neighbour-joining method. Bootstrap values >70 are shown. The numbers of each branch represent the bootstrap value calculated using 1,000 replicates. The scale bars indicate nucleotide substitutions per site. PEDV isolates identified in this study are indicated with solid black circles
Fig. 2
Phylogenetic relationship between the sequences of PEDV Polish strains and sequences of reference strains obtained from GenBank. The phylogenetic trees were constructed on the basis of the M (a) and N (b) nucleotide sequences with the MEGA6 software using the neighbour-joining method. Bootstrap values >70 are shown. The numbers of each branch represent the bootstrap value calculated using 1,000 replicates. The scale bars indicate nucleotide substitutions per site. PEDV isolates identified in this study are indicated with solid black circles