Recent progress in human placental transcriptomics

1Murthi P. Review: Placental homeobox genes and their role in regulating human fetal growth. Placenta. 2014;(35 Suppl):S46-S50. doi: 10.1016/j.placenta.2013.11.006. Murthi P Review: Placental homeobox genes and their role in regulating human fetal growth Placenta 201435 SupplS46 S50 10.1016/j.placenta.2013.11.006Open DOISearch in Google Scholar

2Riesgo A, Andrade SC, Sharma PP, Novo M, Perez-Porro AR, Vahtera V, Gonzalez VL, Kawauchi GY, Giribet G. Comparative description of ten transcriptomes of newly sequenced invertebrates and efficiency estimation of genomic sampling in nonmodel taxa. Front Zool. 2012;9(1):33. doi: 10.1186/1742-9994-9-33. Riesgo A Andrade SC Sharma PP Novo M Perez-Porro AR Vahtera V Gonzalez VL Kawauchi GY Giribet G Comparative description of ten transcriptomes of newly sequenced invertebrates and efficiency estimation of genomic sampling in nonmodel taxa Front Zool 20129133 10.1186/1742-9994-9-33Open DOISearch in Google Scholar

3Majewska M, Lipka A, Paukszto L, Jastrzebski JP, Myszczynski K, Gowkielewicz M, Jozwik M, Majewski MK. Transcriptome profile of the human placenta. Funct Integr Genomics. 2017 Sep;17(5):551-563. doi: 10.1007/sl0142-017-0555-y Majewska M Lipka A Paukszto L Jastrzebski JP Myszczynski K Gowkielewicz M Jozwik M Majewski MK Transcriptome profile of the human placenta Funct Integr Genomics 2017 Sep175551 563 10.1007/sl0142-017-0555-yOpen DOISearch in Google Scholar

4Majewska M, Lipka A, Panasiewicz G, Gowkielewicz M, Jozwik M, Majewski MK, Szafranska B. Identification of novel placentally expressed aspartic proteinase in humans. Int J Mol Sci. 2017; 18(6): 1227. doi: 10.3390/ijmsl8061227. Majewska M Lipka A Panasiewicz G Gowkielewicz M Jozwik M Majewski MK Szafranska B Identification of novel placentally expressed aspartic proteinase in humans Int J Mol Sci 2017 186 1227 10.3390/ijmsl8061227Open DOISearch in Google Scholar

5Majewska M, Lipka A, Paukszto L, Jastrzebski JP, Gowkielewicz M, Jozwik M, Majewski MK. Preliminary RNA-Seq analysis of long non-coding RNAs expressed in human term placenta. Int J Mol Sci. 2018; 19(7): 1894. doi: 10.3390/ijmsl9071894. Majewska M Lipka A Paukszto L Jastrzebski JP Gowkielewicz M Jozwik M Majewski MK Preliminary RNA-Seq analysis of long non-coding RNAs expressed in human term placenta Int J Mol Sci 2018 197 1894 10.3390/ijmsl9071894Open DOISearch in Google Scholar

6Majewska M, Lipka A, Paukszto L, Jastrzebski JP, Szeszko K, Gowkielewicz M, Lepiarczyk E, Jozwik M, Majewski MK. Placenta transcriptome profiling in intrauterine growth restriction (IUGR). Int J Mol Sci. 2019;20(6):1510. doi: 10.3390/ijms20061510. Majewska M Lipka A Paukszto L Jastrzebski JP Szeszko K Gowkielewicz M Lepiarczyk E Jozwik M Majewski MK Placenta transcriptome profiling in intrauterine growth restriction (IUGR) Int J Mol Sci 20192061510 10.3390/ijms20061510Open DOISearch in Google Scholar

7D’Elia P, Marzioni D, Castellucci M, Mocd C, Pala A. Homodimeric pregnancy-associated plasma protein-A in normal human placenta of first and third trimester of pregnancy: biochemical and morphological observations. Placenta. 2012;33(l1):942-945. doi: 10.1016/j.placenta.2012.09.003. D’Elia P Marzioni D Castellucci M Mocd C Pala A Homodimeric pregnancy-associated plasma protein-A in normal human placenta of first and third trimester of pregnancy: biochemical and morphological observations Placenta 201233l1942 945 10.1016/j.placenta.2012.09.003Open DOISearch in Google Scholar

8Founds SA, Terhorst LA, Conrad KP, Hogge WA, Jeyabalan A, Conley YP. Gene expression in first trimester preeclampsia placenta. Biol Res Nurs. 2011;13(2): 134-139. doi: 10.1177/1099800410385448. Founds SA Terhorst LA Conrad KP Hogge WA Jeyabalan A Conley YP Gene expression in first trimester preeclampsia placenta Biol Res Nurs 2011132 134 139 10.1177/1099800410385448Open DOISearch in Google Scholar

9Janssen AB, Tunster SJ, Heazell AE, John RM. Placental PHLDA2 expression is increased in cases of fetal growth restriction following reduced fetal movements. BMC Med Genet. 2016;17:17. doi: 10.1186/sl2881-016-0279-l. Janssen AB Tunster SJ Heazell AE John RM Placental PHLDA2 expression is increased in cases of fetal growth restriction following reduced fetal movements BMC Med Genet 20161717 10.1186/sl2881-016-0279-lOpen DOISearch in Google Scholar

10Doria S, Sousa M, Fernandes S, Ramalho C, Brandao O, Matias A, Barros A, Carvalho F. Gene expression pattern of IGF2, PHLDA2, PEG10 and CDKN1C imprinted genes in spontaneous miscarriages or fetal deaths. Epigenetics. 2010;5(5):444-450. doi: 10.4161/epi.5.5.12118. Doria S Sousa M Fernandes S Ramalho C Brandao O Matias A Barros A Carvalho F Gene expression pattern of IGF2, PHLDA2, PEG10 and CDKN1C imprinted genes in spontaneous miscarriages or fetal deaths Epigenetics 201055444 450 10.4161/epi.5.5.12118Open DOISearch in Google Scholar

11Mourier T, Jeffares DC. Eukaryotic intron loss. Science. 2003;300(5624):1393. doi: 10.1126/science.l080559. Mourier T Jeffares DC Eukaryotic intron loss Science 200330056241393 10.1126/science.l080559Open DOISearch in Google Scholar

12Ranta JK, Raatikainen K, Romppanen J, Pulkki K, Heinonen S. Decreased PAPP-A is associated with preeclampsia, premature delivery and small for gestational age infants but not with placental abruption. Eur J Obstet Gynecol Reprod Biol. 2011 ;157(1):48-52. doi: 10.1016/j.ejogrb.2011.03.004. Ranta JK Raatikainen K Romppanen J Pulkki K Heinonen S Decreased PAPP-A is associated with preeclampsia, premature delivery and small for gestational age infants but not with placental abruption Eur J Obstet Gynecol Reprod Biol 2011157148 52 10.1016/j.ejogrb.2011.03.004Open DOISearch in Google Scholar

13Keniry A, Oxley D, Monni P, Kyba M, Dandolo L, Smits G, Reik W. The H19 lincRNA is a developmental reservoir of miR-675 that suppresses growth and Igf1r. Nat Cell Biol. 2012;14(7):659-665. doi: 10.1038/ncb2521. Keniry A Oxley D Monni P Kyba M Dandolo L Smits G Reik W The H19 lincRNA is a developmental reservoir of miR-675 that suppresses growth and Igf1r Nat Cell Biol 2012147659 665 10.1038/ncb2521Open DOISearch in Google Scholar

14Song X, Luo X, Gao Q, Wang Y, Gao Q, Long W. Dysregulation of LncRNAs in placenta and pathogenesis of preeclampsia. 2017;18(10):l165-1170. doi: 10.2174/1389450118666170 404160000. Song X Luo X Gao Q Wang Y Gao Q Long W Dysregulation of LncRNAs in placenta and pathogenesis of preeclampsia 20171810l165 1170 10.2174/1389450118666170404160000Open DOISearch in Google Scholar

15Yu L, Chen M, Zhao D, Yi P, Lu L, Han J, Zheng X, Zhou Y, Li L. The H19 gene imprinting in normal pregnancy and pre-eclampsia. Placenta. 2009;30(5):443-447. doi: 10.1016/j. placenta.2009.02.011. Yu L Chen M Zhao D Yi P Lu L Han J Zheng X Zhou Y Li L The H19 gene imprinting in normal pregnancy and pre-eclampsia Placenta 2009305443 447 10.1016/j.placenta.2009.02.011Open DOISearch in Google Scholar

16Fu XD. Non-coding RNA: A new frontier in regulatory biology. Natl Sci Rev. 2014 Jun 1 ;1(2):190-204. doi: 10.1093/ nsr/nwu008. Fu XD Non-coding RNA: A new frontier in regulatory biology Natl Sci Rev 2014 Jun 112190 204 10.1093/nsr/nwu008Open DOISearch in Google Scholar

17Lipka A, Panasiewicz G, Majewska M, Paukszto L, Bieniek-Kobuszewska M, Szafranska B. Identification of placental aspartic proteinase in the Eurasian beaver (Castor fiber L.). Int J Mol Sci. 2018;19(4):1229. doi: 10.3390/ijmsl9041229. Lipka A Panasiewicz G Majewska M Paukszto L Bieniek-Kobuszewska M Szafranska B Identification of placental aspartic proteinase in the Eurasian beaver (Castor fiber L.) Int J Mol Sci 20181941229 10.3390/ijmsl9041229Open DOISearch in Google Scholar

18Szafranska B, Panasiewicz G, Majewska M. Biodiversity of multiple pregnancy-associated glycoprotein (PAG) family: gene cloning and chorionic protein purification in domestic and wild eutherians (Placentalia) – a review. Reprod Nutr Dev. 2006;46(5):481-502. doi: 10.1051/ rnd:2006034. Szafranska B Panasiewicz G Majewska M Biodiversity of multiple pregnancy-associated glycoprotein (PAG) family: gene cloning and chorionic protein purification in domestic and wild eutherians (Placentalia) – a review Reprod Nutr Dev 2006465481 502 10.1051/rnd:2006034Open DOISearch in Google Scholar

19Snyder SK, Wessells JL, Waterhouse RM, Dveksler GS, Wessner DH, Wahl LM, Zimmermann W, Dveksler GS. Pregnancy-specific glycoproteins function as immunomodulators by inducing secretion of IL- 10, IL-6 and TGF-betal by human monocytes. Am J Reprod Immunol. 2001;45(4):205-216. doi: 10.111 l/j.8755-8920.2001.450403.x. Snyder SK Wessells JL Waterhouse RM Dveksler GS Wessner DH Wahl LM Zimmermann W Dveksler GS Pregnancy-specific glycoproteins function as immunomodulators by inducing secretion of IL- 10, IL-6 and TGF-betal by human monocytes Am J Reprod Immunol 2001454205 216 10.111l/j.8755-8920.2001.450403.xOpen DOISearch in Google Scholar

20Zhao L, Triche EW, Walsh KM, Bracken MB, Saftlas AF, Hoh J, Dewan AT. Genome-wide association study identifies a maternal copy-number deletion in PSG 11 enriched among preeclampsia patients. BMC Pregnancy Childbirth. 2012; 12:61. doi: 10.1186/1471-2393-12-61. Zhao L Triche EW Walsh KM Bracken MB Saftlas AF Hoh J Dewan AT Genome-wide association study identifies a maternal copy-number deletion in PSG 11 enriched among preeclampsia patients BMC Pregnancy Childbirth 2012 1261 10.1186/1471-2393-12-61Open DOISearch in Google Scholar

21Kadamb R, Mittal S, Bansal N, Batra H, Saluja D. Sin3: Insight into its transcription regulatory functions. Eur J Cell Biol. 2013;92(8-9):237-246. doi: 10.1016/j.ejcb.2013.09.001. Kadamb R Mittal S Bansal N Batra H Saluja D Sin3: Insight into its transcription regulatory functions Eur J Cell Biol 2013928-9237 246 10.1016/j.ejcb.2013.09.001Open DOISearch in Google Scholar

22Landriscina M, Schinzari G, Di Leonardo G, Quirino M, Cassano A, D’Argento E, Lauriola L, Scerrati M, Prudovsky I, Barone C. S100A13, a new marker of angiogenesis in human astrocytic gliomas. J Neurooncol. 2006;80(3):251-259. doi: 10.1007/s11060-006-9189ay. Landriscina M Schinzari G Di Leonardo G Quirino M Cassano A D’Argento E Lauriola L Scerrati M Prudovsky I Barone C S100A13, a new marker of angiogenesis in human astrocytic gliomas J Neurooncol 2006803251 259 10.1007/s11060-006-9189ayOpen DOISearch in Google Scholar

23Cui H, Wang Y, Huang H, Yu W, Bai M, Zhang L, Bryan BA, Wang Y, Luo J, Li D, Ma Y, Liu M. GPR126 protein regulates developmental and pathological angiogenesis through modulation of VEGFR2 receptor signaling. J Biol Chem. 2014 ;289(50):34871-34885. doi: 10.1074/jbc. M114.571000. Cui H Wang Y Huang H Yu W Bai M Zhang L Bryan BA Wang Y Luo J Li D Ma Y Liu M GPR126 protein regulates developmental and pathological angiogenesis through modulation of VEGFR2 receptor signaling J Biol Chem 20142895034871 34885 10.1074/jbc.M114.571000Open DOISearch in Google Scholar

24Ittel A, Bretelle F, Gris JC, Chau C, Sébahoun G, Boubli L, Arnoux D. Increased risk of gestational vascular complications in women with low free tissue factor pathway inhibitor plasma levels out of pregnancy. Thromb Haemost. 2011 ; 105(1):66-71. doi: 10.1160/TH10-06-0399. Ittel A Bretelle F Gris JC Chau C Sébahoun G Boubli L Arnoux D Increased risk of gestational vascular complications in women with low free tissue factor pathway inhibitor plasma levels out of pregnancy Thromb Haemost 2011 105166 71 10.1160/TH10-06-0399Open DOISearch in Google Scholar

25Edstrom CS, Calhoun DA, Christensen RD. Expression of tissue factor pathway inhibitor in human fetal and placental tissues. Early Hum Dev. 2000;59(2):77-84. doi: 10.1016/ S0378-3782(00)00084-0. Edstrom CS Calhoun DA Christensen RD Expression of tissue factor pathway inhibitor in human fetal and placental tissues Early Hum Dev 200059277 84 10.1016/S0378-3782(00)00084-0Open DOISearch in Google Scholar

26Merviel P, Challier JC, Carbillon L, Foidart JM, Uzan S. The role of integrins in human embryo implantation. Fetal Diagn Ther. 2001;16(6):364-371. doi: 10.1159/000053942. Merviel P Challier JC Carbillon L Foidart JM Hyman S The role of integrins in human embryo implantation Fetal Diagn Ther 2001166364 371 10.1159/000053942Open DOISearch in Google Scholar

27Morley LC, Shi J, Gaunt HJ, Hyman AJ, Webster PJ, Williams C, Forbes K, Walker JJ, Simpson NAB, Beech DJ. PIEZO 1 channels are mechanosensors in human fetoplacental endothelial cells. Mol Hum Reprod : MHR Basic Sci Reprod Med. 2018;24(10):510-520. doi: 10.1093/ molehr/gay033. Morley LC Shi J Gaunt HJ Hyman AJ Webster PJ Williams C Forbes K Walker JJ Simpson NAB Beech DJ PIEZO 1 channels are mechanosensors in human fetoplacental endothelial cells Mol Hum Reprod : MHR Basic Sci Reprod Med 20182410510 520 10.1093/molehr/gay033Open DOISearch in Google Scholar

28Liu J, Li D, Cao B, Li YX, Herva R, Piao YS, Wang YL. Expression and localization of SWAP-70 in human fetomaternal interface and placenta during tubal pregnancy and normal placentation. J Histochem Cytochem. 2007;55(7):701-708. doi: 10.1369/jhc.6A7151.2007. Liu J Li D Cao B Li YX Herva R Piao YS Wang YL Expression and localization of SWAP-70 in human fetomaternal interface and placenta during tubal pregnancy and normal placentation J Histochem Cytochem 2007557701 708 10.1369/jhc.6A7151.2007Open DOISearch in Google Scholar

29Mansilla M, Wang Y, Hyett J, da Silva Costa F, Nie G. Serum podocalyxin for early detection of preeclampsia at 11-13 weeks of gestation. Placenta. 2018;71:13-15. doi: 10.1016/j.placenta.2018.09.009. Mansilla M Wang Y Hyett J da Silva Costa F Nie G Serum podocalyxin for early detection of preeclampsia at 11-13 weeks of gestation Placenta 20187113 15 10.1016/j.placenta.2018.09.009Open DOISearch in Google Scholar