[
Altschul S. F., Gish W., Miller W., Myers E. W., Lipman D. J., 1990, Basic local alignment search tool, Journal of Molecular Biology, 215: 403-41010.1016/S0022-2836(05)80360-2
]Search in Google Scholar
[
Alverson A. J., 2008, Molecular Systematics And The Diatom Species, Protist, 159: 339-35310.1016/j.protis.2008.04.001
]Search in Google Scholar
[
Batterbee R. W., 1986, Handbook of Holocene Palaeoecology and Palaeohydrology, John Wiley & Sons Ltd.
]Search in Google Scholar
[
Beszteri B., Ács É., Makk J., Kovács G., Márialigeti K., Kiss, K. T., 2001, Phylogeny of six naviculoid diatoms based on 18S rDNA sequences, Inter. J. Sys. and Evolut. Microbiol., 51: 1581-1586.10.1099/00207713-51-4-1581
]Search in Google Scholar
[
Beszteri B., Ács É., Medlin L. K., 2005a, Conventional and geometric morphometric studies of valve ultrastructural variation in the two closely related Cyclotella species (Bacillariophyta). Eur. J. Phycol., 40: 89-103.10.1080/09670260500050026
]Search in Google Scholar
[
Beszteri B., Ács É., Medlin L. K., 2005b, Ribosomal DNA sequence variation among sympatric strains of Cyclotella meneghiniana complex (Bacillariophyceae) reveals cryptic diversity. Protist, 156: 317-3310.1016/j.protis.2005.07.002
]Search in Google Scholar
[
Bhattacharya D., 1996, Analysis of bootstrap tree lengths using the maximum parsimony method. Mol. Phylogenet. Evol. 6: 339-35010.1006/mpev.1996.0084
]Search in Google Scholar
[
Bortolus A., 2008, Error cascades in the biological sciences: the unwanted consequences of using bad taxonomy in ecology. Ambio, 37: 114-118.10.1579/0044-7447(2008)37[114:ECITBS]2.0.CO;2
]Search in Google Scholar
[
Choi H-G., Joo H. M., Jung W., Hong S. S., Kang J.-S., Kang S.-H., 2008, Morphology and phylogenetic relationships of some psychrophilic polar diatoms (Bacillariophyta). Nov. Hedwig. Beih., 133: 7-30
]Search in Google Scholar
[
Finlay B. J., Monaghan E. B., Maberly S. C., 2002, Hypothesis: the rate and scale of dispersal of freshwater diatom species is a function of their global abundance. Protist, 153: 261-7310.1078/1434-4610-00103
]Search in Google Scholar
[
Gallagher J. C., 1982, Physiological variation and electrophoretic banding patterns of genetically different seasonal populations of Skeletonema costatum (Bacillariophyceae). J. Phycol., 18: 148-16210.1111/j.1529-8817.1982.tb03169.x
]Search in Google Scholar
[
Garduño R. A., Hall B. D., Brown L., Robinson M. G., 1996, Two distinct colonial morphotypes of Amphora coffeaeformis (Bacillariophyceae) cultured on solid media. J. Phycol., 32: 469-47810.1111/j.0022-3646.1996.00469.x
]Search in Google Scholar
[
Godhe A., Mcquoid M. R., Karunasagar I., Karunasagar I., Rehnstam-Holm A.-S., 2006, Comparison of three common molecular tools for distinguishing among geographically separated clones of the diatom Skeletonema marinoi Sarno et Zingone (Bacillariophyceae). J. Phycol., 42: 280-29110.1111/j.1529-8817.2006.00197.x
]Search in Google Scholar
[
Guillard R. L., 1975, Culture of phytoplankton for feeding marine invertebrates. In Culture of marine invertebrate animals. (Smith, W. L. & Chanle, M. N. editors), 29-60. Plenum Press, New York10.1007/978-1-4615-8714-9_3
]Search in Google Scholar
[
Håkansson H., 2002, A compilation and evaluation of species in the genera Stephanodiscus, Cyclostephanos and Cyclotella with new genus in the family Stephanodiscaceae. Diatom Res., 17: 1-13910.1080/0269249X.2002.9705534
]Search in Google Scholar
[
Hall T. A., 1999, BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Ser., 41: 95-8
]Search in Google Scholar
[
Hepperle D., 2004a, Align Ver.07/04©. Multisequence alignment-editor and preparation/manipulation of phylogenetic datasets. Win32-Version. Distributed by the author via: http://www.sequentix.de
]Search in Google Scholar
[
Hepperle D., 2004b, SeqAssem©. A sequence analysis tool, counting assembler and trace data visualization tool for molecular sequences. Win32-Version. Distributed by the author via: http://www.sequentix.de
]Search in Google Scholar
[
Hoshaw R. W., Rosowski J. R., 1979, Methods of microscopic algae. In Handbook of phycological methods. Cultures methods & growth measurements. (Stein, J. R. editor), 53-67. Cambridge University Press, Cambridge
]Search in Google Scholar
[
Jodłowska S., Latała A., 2010, Photoacclimation strategies in the toxic cyanobacterium Nodularia spumigena (Nostocales, Cyanobacteria). Phycologia, 49: 203-21110.2216/PH08-14.1
]Search in Google Scholar
[
Kaczmarska I., Beaton M., Benoit A. C., Medlin L. K., 2005, Molecular phylogeny of selected members of the order Thalassiosirales (Bacillariophyta) and evolution of the fultoportula. J. Phycol., 42: 121-13810.1111/j.1529-8817.2006.00161.x
]Search in Google Scholar
[
Kooistra W. H. C. F., Medlin L. K., 1996, Evolution of the diatoms (Bacillariophyta). IV. A reconstruction of their age from small subunit rRNA coding regions and the fossil record. Mol. Phylogenet. Evol., 6: 391-40710.1006/mpev.1996.0088
]Search in Google Scholar
[
Krammer K., Lange-Bertalot H., 1988, Bacillariophyceae 2. Epithemiaceae. Bacillariaceae, Surirellaceae. In Süsswasserflora von Mitteleuropa 2 (Ettl, H., Gerloff, J., Heynig, H. & Mollenhauer, D., editors), t. 2. Fischer. Stuttgart.
]Search in Google Scholar
[
Krammer K., Lange-Bertalot H., 2008, Bacillariophyceae 2. Centrales. Fragilariaceae, Eutoniaceae. In Süsswasserflora von Mitteleuropa 2 (Ettl, H., Gerloff, J., Heynig, H. & Mollenhauer, D., editors), t. 2. Fischer. Stuttgart.
]Search in Google Scholar
[
Lange-Bertalot H., 1997, Frankophila, Mayamaea und Fistulifera: drei neue Gattungen der Klasse Bacillariophyceae. Archiv für Protisten Kunde. 148: 65-7610.1016/S0003-9365(97)80037-1
]Search in Google Scholar
[
Lange-Bertalot H., 2001, Navicula sensu stricto. 10 genera separated from Navicula sensu lato. Frustulia. In Diatoms of Europe. Diatoms of the European inland waters and comparable habitats. (Lange-Bertalot, H. editor), Vol. 2. A. R. G. Gantner Verlag K. G.
]Search in Google Scholar
[
Lange-Bertalot H., Witkowski A., Bogaczewicz-Adamczak B., Zgrundo A., 2003, Rare and new small-celled taxa of Navicula s. str. in the Gulf of Gdansk and in its freshwater affluents. Limnologica, 33: 258-27010.1016/S0075-9511(03)80021-X
]Search in Google Scholar
[
Latała A., 2003, Autecological characteristic of some algal strains from Culture Collection of Baltic Algae (CCBA). In Biological resource centers and the use of microbes (Lima, N. & Smith, D., editors), 323-345. Braga, Portugal
]Search in Google Scholar
[
Latała A., Jodłowska S., Pniewski F., 2006, Culture Collection of Baltic Algae (CCBA) and characteristic of some strains by factorial experiment approach. Algological Studies, 122: 137-15410.1127/1864-1318/2006/0122-0137
]Search in Google Scholar
[
Latała A., Nędzi M., Stepnowski P., 2009a, Toxicity of imidazolium and pyridinium based ionic liquids towards algae. Chlorella vulgaris, Oocystis submarina (green algae) and Cyclotella meneghiniana, Skeletonema marinoi (diatoms). Green Chemistry, 11: 580-58810.1039/b821140j
]Search in Google Scholar
[
Latała A., Nędzi M., Stepnowski P., 2009b, Toxicity of imidazolium and pyridinium based ionic liquids towards algae. Bacillaria paxillifer (a microphytobenthic diatom) and Geitlerinema amphibium (a microphytobenthic blue green alga). Green Chemistry, 11: 1371-137610.1039/b901887e
]Search in Google Scholar
[
Latała A., Nędzi M., Stepnowski P., 2009c, Acute toxicity assessment of perfluorinated carboxylic acids towards the Baltic microalgae. Environmental Toxicology and Pharmacology, 28: 167-17110.1016/j.etap.2009.03.01021783999
]Search in Google Scholar
[
Lundholm N., Moestrup Ø., 2002, The marine diatom Pseudo-nitzschia galaxiae sp. nov. (Bacillariophyceae): morphology and phylogenetic relationships. Phycologia, 41: 594-60510.2216/i0031-8884-41-6-594.1
]Search in Google Scholar
[
Lundholm, Daugbjerg N. N., Moestrup Ø., 2002, Phylogeny of the Bacillariaceae with emphasis on the genus Pseudo-nitzschia (Bacillariophyceae) based on partial LSU rDNA. Eur. J., Phycol., 37:115-13410.1017/S096702620100347X
]Search in Google Scholar
[
Medlin L. K., Elwood H. J., Strickel S., Sogin M. L., 1991, Morphological and genetic variation within the diatom Skeletonema costatum (Bacillariophyta): evidence for a new species, Skeletonema pseudocostatum. J. Phycol., 27: 514-52410.1111/j.0022-3646.1991.00514.x
]Search in Google Scholar
[
Medlin L. K., Kaczmarska I., 2004, Evolution of diatoms: Morphological and cytological support for the major clades and a taxonomic revision. Phycologia, 43: 245-27010.2216/i0031-8884-43-3-245.1
]Search in Google Scholar
[
Medlin L. K., Kooistra W. H. C. F., Gersonde R., Wellbrock U., 1996, Evolution of the diatoms (Bacillariophyta). II. Nuclear-encoded small-subunit rRNA sequences comparisons confirm paraphyletic origin for centric diatoms. Mol. Biol. Evol., 13: 67-7510.1093/oxfordjournals.molbev.a0255718583907
]Search in Google Scholar
[
Medlin L. K., Kooistra W. C. H. F., Schmid A-M. M., 2000, A review of the evolution of the diatoms - a total approach using molecules, morphology and geology. In The origin and early evolution of diatoms: fossil, molecular and biogeographical approaches (Witkowski, A. & Sieminska, J. editors), 13-35. W. Szafer Institute of Botany, Polish Acadamy of Sciences, Cracow
]Search in Google Scholar
[
Moniz M. B. J., Kaczmarska I., 2009, Barcoding diatoms: Is there a good marker?, Molecular Ecology Resources, 9: 65-7410.1111/j.1755-0998.2009.02633.x21564966
]Search in Google Scholar
[
Moniz M. B. J., Kaczmarska I., 2010, Barcoding of diatoms: Nuclear encoded ITS revisited. Protist, 161: 7-3410.1016/j.protis.2009.07.00119674931
]Search in Google Scholar
[
Page R. D. M., 1996, Treeview: An application to display phylogenetic trees on personal computers. Comput. Appl. Biosci., 12: 357-810.1093/bioinformatics/12.4.3578902363
]Search in Google Scholar
[
Pliński M., 1995, Fitoplankton in Zatoka Pucka (Korzeniewski, K., editor), 395-415. Wydawnictwo Uniwersytetu Gdańskiego, Gdańsk. (in Polish)
]Search in Google Scholar
[
Ronquist F., Huelsenbeck J. P, 2003, Mrbayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, 19:1572-157410.1093/bioinformatics/btg18012912839
]Search in Google Scholar
[
Round F. E., Crawford R. M., Mann D. G., 1990, The Diatoms. Biology and Morphology of the Genera. Cambridge University Press, Cambridge
]Search in Google Scholar
[
Sala S. E., Sar E. A., Ferrario M. E., 1998, Review of materials reported as containing Amphora coffeaeformis (Agardh) Kützing in Argentina. Diatom Res., 13: 323-33610.1080/0269249X.1998.9705454
]Search in Google Scholar
[
Sarno D., Kooistra W. H. C. F., Medlin L. K., Precopo I., Zingone A., 2005, Diversity in the genus Skeletonema (Bacillariophyceae). II. An assessment of the taxonomy of S. costatum-like species with the description of four new species. J. Phycol., 41: 151-176.10.1111/j.1529-8817.2005.04067.x
]Search in Google Scholar
[
Schmid A-M., 2007, The "paradox" diatom Bacillaria paxillifer (Bacillariophyta) revisited. J. Phycol., 43: 139-15510.1111/j.1529-8817.2006.00299.x
]Search in Google Scholar
[
Sims P. A., Mann D. G., Medlin L. K., 2006, Evolution of diatoms: insights from fossil, biological and molecular data. Phycologia, 45: 361-40210.2216/05-22.1
]Search in Google Scholar
[
Sinninghe Damsté S., Muyzer G., Abbas B., Rapen S. W., Masse G. et al., 2004, The rise of the rhizosolenoid diatoms. Science, 304: 584-710.1126/science.109680615105500
]Search in Google Scholar
[
Snoeijs P., Vilbast S., 1994, Intercalibration and Distribution of Diatom Species in The Baltic Sea. Vol. 2. Opulus Press. Uppsala
]Search in Google Scholar
[
Sorhannus U., 2004, Diatom phylogenetics inferred based on direct optimization of nuclear-encoded SSU rRNA sequences. Cladistics. 20: 487-49710.1111/j.1096-0031.2004.00034.x34892952
]Search in Google Scholar
[
Sorhannus U., 2007, A nuclear-encoded small-subunit ribosomal RNA timescale for diatom evolution. Marine Micropaleontology, 65: 1-12.10.1016/j.marmicro.2007.05.002
]Search in Google Scholar
[
Sorhannus U., Gasse F., Perasso R., Baroin Tourancheau A., 1995, A preliminary phylogeny of diatoms based on 28S ribosomal RNA sequence data. Phycologia, 34: 65-7310.2216/i0031-8884-34-1-65.1
]Search in Google Scholar
[
Stoń J., Kosakowska A., Łotocka M., 2002, Pigment composition in relation to phytoplankton community structure and nutrient content in The Baltic Sea. Oceanologia, 44: 419-37
]Search in Google Scholar
[
Swofford D. L., 2001, PAUP*. Phylogenetic Analysis Using Parsimony (* And Other Methods). Version 4.0b8. Sinauer, Sunderland, MA
]Search in Google Scholar
[
Tamura K., Dudlmy J., Nei M., Kumur S., 2007, MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Molecular Biology and Evolution, 24:1596-159910.1093/molbev/msm09217488738
]Search in Google Scholar
[
Theriot E. C., Cannone J. J., Gutell R. R., Alverson A. J., 2009, The limits of nuclear-encoded SSU rDNA for resolving the diatom phylogeny. Eur. J., Phycol., 44: 277-29010.1080/09670260902749159283597520224747
]Search in Google Scholar
[
White T. J., Bruns T. D., Lee S. B., Taylor J. W., 1990, Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. [In:] PCR protocols: a guide to methods and applications. Academic Press, London, 315-32210.1016/B978-0-12-372180-8.50042-1
]Search in Google Scholar
[
Witkowski A., Lange-Bertalot H., Metzeltin, D., 2000, Diatom Flora of Marine Coast. I. In Iconographia Diatomologica 7 (Lange-Bertalot, H. Gantner A. R. G., editors), Verlag K. G.
]Search in Google Scholar
[
Zingone A., Percopo I., Sims P. A., Sarno D., 2005, Diversity in the genus Skeletonema (Bacillariophyceae). I. A reexamination of the type material of S. costatum with the description of S. grevillei sp. nov. J. Pycol., 41: 140-15010.1111/j.1529-8817.2005.04066.x
]Search in Google Scholar
