Many older reports on the occurrence of plant-parasitic nematodes in cultivated fields in Greece were based on the use of morphological and morphometric characteristics, while in recent studies, methods of identification have been updated by using molecular markers in the frame of an integrative taxonomy (Tzortzakakis et al., 2014, 2018; Archidona-Yuste et al., 2020). The objective of this work was to provide morphological and molecular identification of seven species of plant-parasitic nematodes found in various areas and crops in Greece, three of which are being reported for first time in the country.
Nematodes were extracted from soil samples using the wet-sieving and decanting method (Cobb, 1918). Specimens to be observed under light microscopy (LM) were heat-killed by adding hot 4% formaldehyde solution and were processed in pure glycerin using De Grisse's (1969) method. Microscopical observations were carried out using a Leica DM6 (Leica Microsystems, Deerfield, IL) compound microscope with a Leica DFC7000 T digital camera (Leica Camera, Teaneck, NJ). Specimens for molecular analysis were preserved in a solution of dimethyl sulphoxide, disodium EDTA, and saturated NaCl (DESS) (Yoder et al., 2006). Nematode DNA was extracted from single individuals and PCR assays were conducted as described by Subbotin et al. (2014). Primers and PCR conditions used in this research were those specified in Subbotin et al. (2014), and single amplicons of 800 bp in length were obtained by PCR of the D2–D3 expansion segments of 28S rRNA gene.
Light microphotographs of
Morphometrics of
n | 5 | |
L | 983.4 ± 85.3 (900–1117) | |
a | 28.2 ± 1.8 (25.7–30.2) | |
b | 6.0 ± 0.3 (5.8–6.5) | |
c | 10.6 ± 0.7 (9.4–11.2) | |
c’ | 3.8 ± 0.2 (3.6–4.0) | |
V | 81.2 ± 1.3 (80.0–83.0) | |
G1 | 37.7 ± 3.8 (33.6–40.9) | |
Stylet length | 92.8 ± 3.1 (89.0–96.0) | |
O | 8.9 ± 0.9 (7.8–10.0) | |
R | 292.2 ± 15.7 (274–317) | |
Rst | 31.2 ± 1.3 (30.0–33.0) | |
Roes | 59.4 ± 3.6 (55.0–65.0) | |
Rex | 60.2 ± 2.6 (57.0–64.0) | |
RV | 10.6 ± 0.7 (9.4–11.2) | |
Rvan | 19.2 ± 1.9 (17.0–22.0) | |
Ran | 46.0 ± 1.6 (44.0–48.0) | |
VL/VB | 5.1 ± 0.4 (4.7–5.8) | |
Maximum body width | 34.8 ± 1.3 (34.0–37.0) | |
Tail length | 93.0 ± 5.0 (88.0–100.0) |
Measurements are in μm and in the form: mean ± standard deviation, (range).
Abbreviations: a = body length/maximal body width; b = body length/pharyngeal length; c = body length/tail length; c’ = tail length/body width at anus; G1 = anterior genital branch length expressed as percentage (%) of the body length; L = total body length; n = number of specimens studied; O = distance between stylet base and orifice of dorsal pharyngeal gland as percentage of stylet length; R = total number of body annuli; Ran = number of annuli on tail; Rex, number of annuli between anterior end of body and excretory pore; Roes, number of annuli in pharyngeal region; Rst, number of body annuli between labial disc and stylet knobs; RV = number of annuli between posterior end of body and vulva; Rvan = number of annuli between vulva and anus; V = (distance from anterior end to vulva/body length) × 100; VL/VB = distance between vulva and posterior end of body divided by body width at vulva.
Specimens of
Blastn search of D2–D3 sequences of the Greek population of
This nematode has been reported as a serious pest to various cultivated plants (Chitambar, 1993; Emilse et al., 2011; Subbotin et al., 2014; Nguyen and Trinh, 2021). However, its damage to the
Morphometrics of
n | 5 | 5 | 3 |
L | 692.3 ± 54.9 (644–752) | 593.2 ± 43.7 (538–642) | 584.0 ± 45.1 (555–636) |
a | 26.6 ± 0.4 (26.2–26.9) | 26.1 ± 2.1 (23.4–27.9) | 25.4 ± 1.1 (24.4–26.5) |
b | 6.0 ± 0.2 (5.9–6.3) | 5.1 ± 0.3 (4.8–5.3) | 4.9 ± 0.4 (4.7–5.2) |
c | 39.5 ± 3.0 (37.6–42.9) | 19.6 ± 0.6 (18.7–20.2) | 18.8 ± 0.9 (18.1–19.9) |
c’ | 1.35 ± 0.1 (1.3–1.4) | 2.4 ± 0.1 (2.3–2.5) | 2.4 ± 0.1 (2.3–2.5) |
V | 64.0 ± 2.0 (62.0–66.0) | 57.5 ± 0.4 (57.2–58.1) | - |
Stylet length | 25.3 ± 1.5 (24.0–27.0) | 17.1 ± 0.2 (17.0–17.5) | 16.5 ± 0.7 (16.0–17.0) |
O | 45.5 ± 5.5 (40.5–51.4) | - | - |
Spicules | - | - | 18.0 ± 1.0 (17.0–19.0) |
Gubernaculum | - | - | 11.3 ± 0.6 (11.0–12.0) |
Maximum body width | 26.0 ± 2.0 (24.0–28.0) | 22.7 ± 0.4 (22.0–23.0) | 23.0 ± 1.0 (22.0–24.0) |
Tail length | 17.7 ± 2.5 (15.0–20.0) | 30.2 ± 1.5 (28.0–32.0) | 31.0 ± 1.0 (30.0–32.0) |
Measurements are in μm and in the form: mean ± standard deviation, (range).
Abbreviations: a = body length/maximal body width; b = body length/pharyngeal length; c = body length/tail length; c’ = tail length/body width at anus; G1 = anterior genital branch length expressed as percentage (%) of the body length; L = total body length; n = number of specimens studied; O = distance between stylet base and orifice of dorsal pharyngeal gland as percentage of stylet length; V = (distance from anterior end to vulva/body length) × 100.
Specimens of
Blastn search of D2–D3 sequences of the Greek
Specimens of
Other nematode populations, matching with the genera
Blastn search of D2–D3 sequences of the Greek population of
The spiral nematode from kiwi fruit (Pieria) and pistachio (Korinthia) was identified as
Other nematode species were recovered and identified from Tyrnavos and Athens.
D2–D3 sequences from both species have been deposited in NCBI GenBank with accession numbers OR286406 and OR286407 for
We do not have evidence to state whether any of the nematode species reported here are a potential threat to the associated host plants.
In conclusion, the present study increases the knowledge on the biodiversity of plant-parasitic nematodes in Greece by adding new records and additional tentative new hosts.