This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.
D.W. Snoke, “Spontaneous appearance of life and the second law of thermodynamics,” Biocosmos2, 1 (2022).SnokeD.W.“Spontaneous appearance of life and the second law of thermodynamics,”Biocosmos212022Search in Google Scholar
R. Landauer, “Irreversibility and heat generation in the computing process,” IBM Journal of Research and Development5, 183 (1961).LandauerR.“Irreversibility and heat generation in the computing process,”IBM Journal of Research and Development51831961Search in Google Scholar
G. Sewell, “On ‘compensating’ entropy decreases,” Physics Essays30, 1 (2017).SewellG.“On ‘compensating’ entropy decreases,”Physics Essays3012017Search in Google Scholar
D.W. Snoke, Interpreting Quantum Mechanics: Modern Foundations, (Cambridge University Press, 2024).SnokeD.W.Interpreting Quantum Mechanics: Modern FoundationsCambridge University Press2024Search in Google Scholar
D.W. Snoke, G.-Q. Liu, and S.M. Girvin, “The basis of the second law of thermodynamics in quantum field theory,” Annals of Physics327, 1825 (2012).SnokeD.W.LiuG.-Q.GirvinS.M.“The basis of the second law of thermodynamics in quantum field theory,”Annals of Physics32718252012Search in Google Scholar
A.L. Retore, “Introduction to classical and quantum integrability,” Journal of Physics A: Mathemathical and Theoretical55, 173001 (2022).RetoreA.L.“Introduction to classical and quantum integrability,”Journal of Physics A: Mathemathical and Theoretical551730012022Search in Google Scholar
M. Serbyn, D.A. Abanin, and Z. Papić, “Quantum many-body scars and weak breaking of ergodicity,” Nature Physics17, 675 (2021).SerbynM.AbaninD.A.PapićZ.“Quantum many-body scars and weak breaking of ergodicity,”Nature Physics176752021Search in Google Scholar
A. Polkovnikov, “Microscopic diagonal entropy and its connection to basic thermodynamic relations,” Annals of Physics326, 486 (2011).PolkovnikovA.“Microscopic diagonal entropy and its connection to basic thermodynamic relations,”Annals of Physics3264862011Search in Google Scholar
W. Band, An Introduction to Quantum Statistics, (D. van Nostrand, 1955).BandW.An Introduction to Quantum StatisticsD. van Nostrand1955Search in Google Scholar
J. Keeling, “Superfluid density of an open dissipative condensate,” Physical Review Letters107, 080402 (2011).KeelingJ.“Superfluid density of an open dissipative condensate,”Physical Review Letters1070804022011Search in Google Scholar
H. Brown, “Once and for all: the curious role of probability in the Past Hypothesis,” PhilSci archive preprint 13008.BrownH.“Once and for all: the curious role of probability in the Past Hypothesis,”PhilSci archive preprint 13008.Search in Google Scholar
A. L. Fetter and J. D. Walecka, Quantum Theory of Many-Particle Systems, (McGraw-Hill, 1971).FetterA. L.WaleckaJ. D.Quantum Theory of Many-Particle SystemsMcGraw-Hill1971Search in Google Scholar
F. Mandl and G. Shaw, Quantum Field Theory, 2nd ed., (Wiley, 2010).MandlF.ShawG.Quantum Field Theory2nd ed.Wiley2010Search in Google Scholar
D.W. Snoke, Solid State Physics: Essential Concepts, 2nd ed., (Cambridge University Press, 2020).SnokeD.W.Solid State Physics: Essential Concepts2nd ed.Cambridge University Press2020Search in Google Scholar
E. Schrödinger, What Is Life? The Physical Aspect of the Living Cell, (Doubleday, 1944).SchrödingerE.What Is Life? The Physical Aspect of the Living CellDoubleday1944Search in Google Scholar
Y. Lithwick and Y. Wu, “Secular chaos and its application to Mercury, hot Jupiters, and the organization of planetary systems,” Proceedings of the National Academy of Sciences (USA) 111, 12610 (2014).LithwickY.WuY.“Secular chaos and its application to Mercury, hot Jupiters, and the organization of planetary systems,”Proceedings of the National Academy of Sciences (USA)111126102014Search in Google Scholar
A. Diéguez. “Life as a homeostatic property cluster,” Biological Theory7, 180 (2013).DiéguezA.“Life as a homeostatic property cluster,”Biological Theory71802013Search in Google Scholar
C. Mariscal, “Life,” Stanford Encyclopedia of Philosophy (Winter 2021).MariscalC.“Life,”Stanford Encyclopedia of PhilosophyWinter2021Search in Google Scholar
F. Reif, Fundamentals of Statistical and Thermal Physics, (McGraw-Hill, 1965).ReifF.Fundamentals of Statistical and Thermal PhysicsMcGraw-Hill1965Search in Google Scholar
L. Szilard, “On the decrease of entropy in a thermodynamic system by the intervention of intelligent beings,” Zeitschrift für Physik53, 840 (1929).SzilardL.“On the decrease of entropy in a thermodynamic system by the intervention of intelligent beings,”Zeitschrift für Physik538401929Search in Google Scholar
“Emergence in solid state physics and biology,” Foundations of Physics50, 1098 (2020).“Emergence in solid state physics and biology,”Foundations of Physics5010982020Search in Google Scholar
W. Bialek, “Ambitions for theory in the physics of life,” Arxiv:2401.15538.BialekW.“Ambitions for theory in the physics of life,”Arxiv:2401.15538.Search in Google Scholar
D.W. Snoke, Electronics: A Physical Approach, (Pearson, 2015).SnokeD.W.Electronics: A Physical ApproachPearson2015Search in Google Scholar
T. Dingjan and A. Futerman, “The fine-tuning of cell membrane lipid bilayers accentuates their compositional complexity,” BioEssays43, 2100021 (2021).DingjanT.FutermanA.“The fine-tuning of cell membrane lipid bilayers accentuates their compositional complexity,”BioEssays4321000212021Search in Google Scholar
J. H. Lorent, K. R. Levental, L. Ganesan, G. Rivera-Longsworth, E. Sezgin, M. Doktorova, E. Lyman and I. Levental, “Plasma membranes are asymmetric in lipid unsaturation, packing and protein shape,” Nature Chemical Biology16, 644 (2020).LorentJ. H.LeventalK. R.GanesanL.Rivera-LongsworthG.SezginE.DoktorovaM.LymanE.LeventalI.“Plasma membranes are asymmetric in lipid unsaturation, packing and protein shape,”Nature Chemical Biology166442020Search in Google Scholar
https://github.com/ZijunH/Roche Biochemical Pathway Generatorhttps://github.com/ZijunH/Roche Biochemical Pathway GeneratorSearch in Google Scholar
M. Pigliucci and M. Boudry, “Why machine-information metaphors are bad for science and science education,” Science and Education, 20, 453 (2011).PigliucciM.BoudryM.“Why machine-information metaphors are bad for science and science education,”Science and Education204532011Search in Google Scholar
T. Wilhelm, “The smallest chemical reaction system with bistability,” BMC Systems Biology3, 90 (2009).WilhelmT.“The smallest chemical reaction system with bistability,”BMC Systems Biology3902009Search in Google Scholar
J. Keener and H. Sneyd, Mathematical Physiology, 2nd ed., (Springer, 2008).KeenerJ.SneydH.Mathematical Physiology2nd ed.Springer2008Search in Google Scholar
D. Snoke, “Systems biology as a research program for intelligent design,” Bio-Complexity3, 1 (2014).SnokeD.“Systems biology as a research program for intelligent design,”Bio-Complexity312014Search in Google Scholar
U. Alon, An Introduction to Systems Biology: Design Principles of Biological Circuits, (CRC Press, 2006).AlonU.An Introduction to Systems Biology: Design Principles of Biological CircuitsCRC Press2006Search in Google Scholar
System Modeling in Cellular Biology: From Concepts to Nuts and Bolts, Z. Szallasi, J. Stelling, and V. Perival, eds. (MIT Press, 2006).System Modeling in Cellular Biology: From Concepts to Nuts and BoltsSzallasiZ.StellingJ.PerivalV.eds.MIT Press2006Search in Google Scholar