Otwarty dostęp

Expression of three phenylpropanoid pathway genes in Scots pine (Pinus sylvestris L.) in open-pollinated families with differing relative wood densities during early and late wood formation


Zacytuj

ALONSO-BLANCO, C., M. G. AARTS, L. BENTSINK, J. J. KEURENTJES and M. REYMOND (2009): What has natural variation taught us about plant development, physiology, and adaptation? Plant Cell 21: 1877-1896.10.1105/tpc.109.068114272961419574434Search in Google Scholar

BAGAL, U. R., J. H. LEEBENS-MACK, W. W. LORENZ and F. D. J. DEAN (2012): The phenylalanine ammonia lyase (PAL) gene family shows a gymnosperm-specific lineage. BMC Genomics 13 (Suppl 3): S1.10.1186/1471-2164-13-S3-S1339442422759610Search in Google Scholar

BATE, N., J. ORR, W. NI, A. MEROMI, T. NADLERHASSA, P. W. DOERNER, R. A. DIXON, C. J. LAMB and Y. ELKIND (1994): Quantitative relationship between phenylalanine ammonia-lyase levels and phenylpropanoid accumulation in transgenic tobacco identifies a rate-determining step in natural product synthesis. P Natl Acad Sci USA 91: 7608-7612.10.1073/pnas.91.16.7608444518052628Search in Google Scholar

BAUCHER, M., B. CHABBERT, G. PILATE, J. VAN DOOR - SSELAERE and M. T. TOLLIER (1996): Red xylem and higher lignin extractability by down-regulating a cinnamyl alcohol dehydrogenase in poplar (Populustremulax P. alba). Plant Physiol 112: 1479-90.10.1104/pp.112.4.147915808012226459Search in Google Scholar

BERTAUD, F. and B. HOLMBOM (2004): Chemical composition of early wood and late wood in Norway spruce heartwood, sapwood and transition zone wood. Wood Sci Technol 38: 245-256.10.1007/s00226-004-0241-9Search in Google Scholar

BOERJAN, W., J. RALPH and M. BAUCHER (2003): Lignin biosynthesis. Annu Rev Plant Biol 54: 519-546.10.1146/annurev.arplant.54.031902.13493814503002Search in Google Scholar

BUTLAND, S. L., M. L. CHOW and B. E. ELLIS (1998): A diverse family of phenylalanine ammonia-lyase genes expressed in pine trees and cell cultures. Plant Mol Biol 37: 15-24.10.1023/A:1005941228246Search in Google Scholar

CAMPBELL, M.M. and B. E. ELLIS (1992): Fungal elicitor- mediated responses in pine cell cultures. 1. Induction of phenylpropanoid metabolism. Planta 186: 409-417.10.1007/BF0019532224186738Search in Google Scholar

CAMPBELL, M. M. and R. R. SEDEROFF (1996): Variation in lignin content and composition, mechanisms of control and implications for the genetic improvement of plants. Plant Physiol 110: 3-13.10.1104/pp.110.1.315768812226169Search in Google Scholar

CATO, S., L. MCMILLAN, L. DONALDSON, T. RICHARDSON, C. ECHT and R. GARDNER (2006): Wood formation from the base to the crown in Pinus radiata: Gradients of tracheid wall thickness, wood density, radial growth rate and gene expression. Plant Mol Biol 60: 565-581.10.1007/s11103-005-5022-916525892Search in Google Scholar

CHANG, S., J. PURYEAR and J. CAIRNEY (1993): A simple and efficient method for isolating RNA from pine trees. Plant Mol Biol Rep 11: 113-116.10.1007/BF02670468Search in Google Scholar

DILLON, S. K., M. NOLAN, W. LI, C. BELL, H. WU and S. G. SOUTHERTON (2010): Allelic variation in cell wall candidate genes affecting solid wood properties in natural populations and land races of Pinus radiata. Genetics 185: 1477-1487.10.1534/genetics.110.116582Search in Google Scholar

DIXON, R. A., L. ACHNINE, P. KOTA, C. J. LIU, M. S. S. REDD and L. WANG (2002): The phenylpropanoid pathway and plant defence a genomics perspective. Mol Plant Pathol 3: 371-390.10.1046/j.1364-3703.2002.00131.xSearch in Google Scholar

DVORNYK, V., A. SIRVIO, M. MIKKONEN and O. SAVOLAINEN (2002): Low nucleotide diversity at the pal1 locus in the widely distributed Pinus sylvestris. Mol Biol Evol 19: 179-188.10.1093/oxfordjournals.molbev.a004070Search in Google Scholar

EBERHARDT, T. L., M. A. BERNARDS, L. HE, L. B. DAVIN, J. B. WOOTEN and N. G. LEWIS (1993): Lignification in cell suspension cultures of Pinus taeda. In situ characterization of a gymnosperm lignin. J Biol Chem 268: 21088-21096.10.1016/S0021-9258(19)36897-8Search in Google Scholar

EGERTSDOTTER, U., L. M. VAN ZYL, J. MACKAY, G. PETER, M. KIRST, C. CLARK, R. WHETTEN and R. SEDEROFF (2004): Gene expression during formation of earlywood and latewood in loblolly pine: expression profiles of 350 genes. Plant Biology 6: 654-663.10.1055/s-2004-83038315570469Search in Google Scholar

HANNRUP, B., L. WILHELMSSON and O. DANELL (1998): Time trends for genetic parameters of wood density and growth traits in Pinus sylvestris L. Silvae Genet 47: 214-219.Search in Google Scholar

HANSEN, C. P. (2000): Application of the Pilodyn in Forest Tree Improvement. DFSC Series of Technical Notes. TN55. Danida Forest Seed Centre, Humlebaek, DenmarkSearch in Google Scholar

KIEN, N. D., G. JANSSON, C. HARWOOD, C. ALMQVIST and H. H. THINH (2008): Genetic variation in wood basic density and pilodyn penetration and their relationships with growth, stem straightness, and branch size for Eucalyptus urophylla in Northern Vietnam. New Zeal J For Sci 38: 160-174.Search in Google Scholar

KOUTANIEMI, S., T. WARINOWSKI, A. KÄRKÖNEN, E. ALATALO, C. G. FOSSDAL, P. SARANPÄÄ, T. LAAKSO, K. V. FAGERSTEDT, L. K. SIMOLA, L. PAULIN, S. RUDD and T. H. TEERI (2007): Expression profiling of the lignin biosynthetic pathway in Norway spruce using EST sequencing and real-time RTPCR. Plant Mol Biol 65: 311-328.10.1007/s11103-007-9220-517764001Search in Google Scholar

KUMAR, M., P. SARANPÄÄ, J. R. BARNETT and M. J. WILKINSON (2009): Juvenile-mature wood transition in pine: correlation between wood properties and candidate gene expression profiles. Euphytica 166: 341 355.10.1007/s10681-008-9815-1Search in Google Scholar

LEGAY, S., P. SIVADON, A. S. BLERVACQ, N. PAVY, A. BAGHDADY, L. TREMBLAY, C. LEVASSEUR, N. LADOUCE, C. LAPIERRE, A. SEGUIN, S. HAWKINS, J. MACKAY and J. GRIMA-PETTENATI (2010): EgMYB1, an R2R3 MYB transcription factor from eucalyptus negatively regulates secondary cell wall formation in Arabidopsis and poplar. New Phytol 188: 774-786.10.1111/j.1469-8137.2010.03432.x20955415Search in Google Scholar

LEV-YADUN, S. and R. SEDEROFF (2000): Pines as model gymnosperms to study evolution,wood formation and perennial growth. J Plant Growth Regul 19: 290-305.10.1007/s003440000045Search in Google Scholar

LI, L.G., S. LU and V. CHIANG (2006): A genomic and molecular view of wood formation. Crit Rev Plant Sci 25: 215-233.10.1080/07352680600611519Search in Google Scholar

LI, X., H. WU, S. DILLON and S. G. SOUTHERTON (2009): Generation and analysis of expressed sequence tags from six developing xylem libraries in Pinus radiata D. Don. BMC Genomics 10: 41.10.1186/1471-2164-10-41263682919159482Search in Google Scholar

LI, X. G., H. X. WU and S. G. SOUTHERTON (2011a): Transcriptome profiling of wood maturation in Pinus radiata identifies differentially expressed genes with implications in juvenile and mature wood variation. Gene 487: 62-71.10.1016/j.gene.2011.07.02821839815Search in Google Scholar

LI, X. G., H. X. WU and S. G. SOUTHERTON (2011b): Transcriptome profiling of Pinus radiata juvenile wood with contrasting stiffness identifies putative candidate genes involved in microfibril orientation and cell wall mechanics. BMC Genomics 12: 480.10.1186/1471-2164-12-480322421021962175Search in Google Scholar

MACKAY, J. J., D. M. O’MALLEY, T. PRESELL, F. L. BOOKER, M. M. CAMPBELL, R. W. WHETTEN and R. R. SEDEROFF (1997): Inheritance, gene expression, and lignin characterization in a mutant pine deficient in cinnamyl alcohol dehydrogenase. P Natl Acad Sci USA 94: 8255-8260.10.1073/pnas.94.15.8255215909223348Search in Google Scholar

NICOLOV, N. and H. HELMISAARI (1992): Silvics of the circumpolar boreal forest tree species. In: SHUGART, H., LEEMANS, R., BOWAN, G. (eds) A systems analysis of the global boreal forest. Cambridge University Press, Cambridge pp 13-84.10.1017/CBO9780511565489.003Search in Google Scholar

O’MALLEY, D. M., S. PORTER and R. R. SEDEROFF (1992): Purification, characterization, and cloning of cinnamyl alcohol dehydrogenase in loblolly pine (Pinus taeda L.). Plant Physiol 98: 1364-1371.10.1104/pp.98.4.1364108035816668801Search in Google Scholar

PALLE, S., C. SEEVE, A. ECKERT, W. CUMBIE, B. GOLDFARB and C. LOOPSTRA (2010): Natural variation in expression of genes involved in xylem development in loblolly pine (Pinus taeda L.). Tree Genet Genomes 7: 193-206.10.1007/s11295-010-0325-7Search in Google Scholar

PLOMION, C., G. LEPROVOST and A. STOKES (2001): Wood formation in trees. Plant Physiol 127: 1513-1523.10.1104/pp.010816Search in Google Scholar

POKE, F. S., B. M. POTTS, R. E. VAILLANCOURT and C. A. RAYMOND (2006): Genetic parameters for lignin, extractives and decay in Eucalyptus globulus. Ann For Sci 63: 813-821.10.1051/forest:2006080Search in Google Scholar

POT, D., G. CHANTRE, P. ROZENBERG, J. C. RODRIGUES, G. L. JONES, H. PEREIRA, B. HANNRUP, C. CAHALAN and C. PLOMION (2002): Genetic control of pulp and timber properties in maritime pine (Pinus pinaster Ait.), Ann For Sci 59: 563-575.10.1051/forest:2002042Search in Google Scholar

RAHANTAMALALA, A., P. RECH, Y. MARTINEZ, N. CHAUBET-GIGOT, J. GRIMA-PETTENATI and V. PACQUIT (2010): Coordinated transcriptional regulation of two key genes in the lignin branch pathway - CAD and CCR - is mediated through MYB-binding sites. BMC Plant Biol 10: 130-142.10.1186/1471-2229-10-130301777620584286Search in Google Scholar

RAYMOND, C. A. and A. C. MACDONALD (1998): Where to shoot your pilodyn: within tree variation in basic density in plantation Eucalyptus globulus and E. nitens in Tasmania. New Forest 15: 205-221.10.1023/A:1006544918632Search in Google Scholar

RUBIO-PIÑA, J. A. and O. ZAPATA-PÉREZ (2011): Isolation of total RNA from tissues rich in polyphenols and polysaccharides of mangrove plants. Electronic Journal of Biotechnology, 14:5. doi:10.2225/vol14- issue5-fulltext-8Search in Google Scholar

ŠK¸IPARS, V., B. KRIVMANE and D. RUN¸G¸IS (2011): Thaumatin-like protein gene copy number variation in Scots pine (Pinus sylvestris). Environmental and Experimental Biology 9: 75-81.Search in Google Scholar

UGGLA, C., E. MAGEL, T. MORITZ and B. SUNDBERG (2001): Function and dynamics of auxin and carbohydrates during early wood/late wood transition in Scots pine. Plant Physiol 125: 2029-2039.10.1104/pp.125.4.20298885811299382Search in Google Scholar

UKRAINETZ, N. K., K. Y. KANG, S. N. AITKEN, M. STOEHR and S. D. MANSFIELD (2008): Heritability and phenotypic and genetic correlations of coastal Douglas-fir (Pseudotsuga menziesii) wood quality traits. Can J Forest Res 38: 1536-1546.10.1139/X07-234Search in Google Scholar

VANHOLME, R., B. DEMEDTS, K. MORREEL, J. RALPH and W. BOERJAN (2010): Lignin biosynthesis and structure. Plant Physiol 153: 895-905.10.1104/pp.110.155119289993820472751Search in Google Scholar

VARGAS-HERNANDEZ, J. and W. T. ADAMS (1994): Genetic relationships between wood density components and cambial growth rhythm in young coastal Douglas-fir. Can J Forest Res 24: 1871-1876.10.1139/x94-241Search in Google Scholar

WHETTEN, R. and R. R. SEDEROFF (1992): Phenylalanine ammonia lyase from loblolly pine: Purification of the enzyme and isolation of complementary DNA clones. Plant Physiol 98: 380-386.10.1104/pp.98.1.380108019316668639Search in Google Scholar

WHETTEN, R. and R. R. SEDEROFF (1995): Lignin biosynthesis. Plant Cell 7: 1001-1013.10.2307/3870053Search in Google Scholar

WHETTEN, R., Y. H. SUN, Y. ZHANG and R. R. SEDEROFF (2001): Functional genomics and cell wall biosynthesis in loblolly pine. Plant Mol Biol 47: 275-291.10.1023/A:1010652003395Search in Google Scholar

YANG, S. H. and C. A. LOOPSTRA (2005): Seasonal variation in gene expression for loblolly pines (Pinus taeda) from different geographical regions. Tree Physiol 25: 1063-1073.10.1093/treephys/25.8.106315929937Search in Google Scholar

YU, Q., S. E. MCKEAND, C. D. NELSON, B. LI, J. R. SHERRILL and T. J. MULLIN (2005): Differences in wood density and growth of fertilized and nonfertilized loblolly pine associated with a mutant gene, cad-n1. Can J Forest Res 35: 1723-1730.10.1139/x05-103Search in Google Scholar

YU, Q., B. LI, C. D. NELSON, S. E. MCKEAND, V. B. BATISTA and T. J. MULLIN (2006): Association of the cad-n1 allele with increased stem growth and wood density in full-sib families of loblolly pine. Tree Genet Genomes 2: 98-108.10.1007/s11295-005-0032-ySearch in Google Scholar

eISSN:
2509-8934
Język:
Angielski
Częstotliwość wydawania:
Volume Open
Dziedziny czasopisma:
Life Sciences, Molecular Biology, Genetics, Biotechnology, Plant Science