[
Aiello D, Ferradini N, Torelli L, Volpi C, Lambalk J, Russi L, Albertini E (2020) Evaluation of Cross-Species Transferability of SSR Markers in Foeniculum vulgare. Plants 9:175. https://doi.org/10.3390/plants902017510.3390/plants9020175
]Search in Google Scholar
[
Aldrich PR, Michler CH, Sun W, Severson JR (2002) Microsatellite markers for northern red oak (Fagaceae: Quercus rubra). Molecular Ecology Notes 2:472–474. https://doi.org/10.1046/j.1471-8286.2002.00282.x10.1046/j.1471-8286.2002.00282.x
]Search in Google Scholar
[
Aldrich PR, Jagtap M, Michler CH, Romero-Severson J (2003) Amplification of North American red oak microsatellite markers in European white oaks and Chinese chestnut. Silvae Genetica 52:176–179. https://www.fs.usda.gov/treesearch/pubs/13921
]Search in Google Scholar
[
Bacilieri R, Ducousso A, Petit RJ, Kremer A (1996) Mating system and asymetric hybridization in a mixed stand of European oaks. Evolution 50:900-908. https://doi.org/10.1111/j.1558-5646.1996.tb03898.x10.1111/j.1558-5646.1996.tb03898.x
]Search in Google Scholar
[
Barbara T, Palma-silva C, Paggi GM, Bered F, Fay MF, Lexer C (2007) Cross-species transfer of nuclear microsatellite markers: Potential and limitations. Molecular Ecology 16:3759–3767. https://doi.org/10.1111/j.1365-294X.2007.03439.x10.1111/j.1365-294X.2007.03439.x
]Search in Google Scholar
[
Borazan A, Babaç MT (2003) Morphometric leaf variation in oaks (Quercus) of Bolu, Turkey. Ann. Bot. Fenn. 40:233-242. https://www.jstor.org/stable/23726840
]Search in Google Scholar
[
Cai K, Zhu L, Zhang K, Li L, Zhao Z, Zeng W, Lin X (2019) Development and Characterization of EST-SSR Markers From RNA-Seq Data in Phyllostachys violascens. Frontiers in Plant Science 10:50. https://doi.org/10.3389/fpls.2019.0005010.3389/fpls.2019.00050
]Search in Google Scholar
[
Charalambos N, Filippos AA, Siegfried F, Aikaterini D (2011) Interfertile oaks in an island environment. II. Limited hybridization between Quercus alnifolia Poech and Q. coccifera L. in a mixed stand. European Journal of Forest Research 130:623-635. https://doi.org/10.1007/s10342-010-0454-410.1007/s10342-010-0454-4
]Search in Google Scholar
[
Doyle JJ, Doyle JL (1987) A rapid DNA isolation procedure for small quantities of fresh leaf material. Phytochemical Bulletin 19:11–15.
]Search in Google Scholar
[
Ellis JR, Burke JM (2007) EST-SSRs as a resource for population genetic analyses. Heredity 99(2):125–132. https://doi.org/10.1038/sj.hdy.680100110.1038/sj.hdy.6801001
]Search in Google Scholar
[
Ginwal HS, Chauhan P, Maurya SS, Jadon VS (2010) Genetic variability in Pinus roxburghii Sarg. revealed by RAPD markers. Bioremediation, Biodiversity and Bioavailability 4:28-34.
]Search in Google Scholar
[
Ginwal HS, Sharma R, Chauhan P, Rai KC, Barthwal S (2020) Chloroplast microsatellites reveal genetic diversity and population structure in natural populations of Himalayan Cedar (Cedrus deodara (Roxb.) G. Don) in India. Silvae Genetica 69:86-93. https://doi.org/10.2478/sg-2020-001210.2478/sg-2020-0012
]Search in Google Scholar
[
Isagi Y, Suhandono S (1997) PCR primers amplifying microsatellite loci of Quercus myrsinifolia Blume and their conservation between oak species. Molecular Ecology 6:897-899. https://doi.org/10.1046/j.1365-294X.1997.d01-218.x10.1046/j.1365-294X.1997.d01-218.x
]Search in Google Scholar
[
Jarne P, Lagoda PJ (1996) Microsatellites, from molecules to populations and back. Trends in Ecology & Evolution 11:424–429. https://doi.org/10.1016/0169-5347(96)10049-510.1016/0169-5347(96)10049-5
]Search in Google Scholar
[
Joshi R, Sambhav K, Singh SP (2018) Near surface temperature lapse rate for treeline environment in western Himalaya and possible impacts on ecotone vegetation. Tropical Ecology 59(2):197- 209
]Search in Google Scholar
[
Keator G, Bazel S (1998) The life of an oak: An intimate portrait. California, USA: Heyday Books, 256 p. ISBN 0930588983.
]Search in Google Scholar
[
Kitamura K, Namikawa K, Kawahara T, Matsumoto A, Jose-Maldia LS (2017) Genetic structure of remnant Quercus serrata populations at the northernmost limit of their distribution in Japan. Acta Phytotaxonomica et Geobotanica 68(1):1–15. https://doi.org/10.18942/apg.201617
]Search in Google Scholar
[
Kumar S, Kumar SS (2014) Studies on molecular marker based genetic diversity in quercus species of Nainital, Uttarakhand. International Journal of Latest Research in Science and Technology 3(1):106-110. https://www.mnkpublication.com/journal/ijlrst/index.php
]Search in Google Scholar
[
Lebedev VG, Subbotina NM, Maluchenko OP, Lebedeva TN, Krutovsky KV, Shestibratov KA (2020) Transferability and polymorphism of SSR markers located in flavonoid pathway genes in Fragaria and Rubus species. Genes 11:11. https://doi.org/10.3390/genes1101001110.3390/genes11010011701706831877734
]Search in Google Scholar
[
Lee YJ, Hwang S, Ho K, Lin T (2006) Source populations of Quercus glauca in the last glacial age in Taiwan revealed by nuclear microsatellite markers. Journal of Heredity 97(3):261–269. https://doi.org/10.1093/jhered/esj03010.1093/jhered/esj03016614134
]Search in Google Scholar
[
Liu K, Muse SV (2005) PowerMarker: an integrated analysis environment for genetic marker analysis. Bioinformatics 21(9):2128–2129. https://doi.org/10.1093/bioinformatics/bti28210.1093/bioinformatics/bti28215705655
]Search in Google Scholar
[
Lupini A, Aci MM, Mauceri A (2019) Genetic diversity in old populations of sessile oak from Calabria assessed by nuclear and chloroplast SSR. Journal of Mountain Science 16(5). https://doi.org/10.1007/s11629-018-5335-110.1007/s11629-018-5335-1
]Search in Google Scholar
[
Mason AS (2015) SSR genotyping. In: Batley J (eds) Plant genotyping. Methods in Molecular Biology (Methods and Protocols), vol 1245. New York: Humana Press, pp 77–89. https://doi.org/10.1007/978-1-4939-1966-6_610.1007/978-1-4939-1966-6_625373750
]Search in Google Scholar
[
Matschiner M, Salzburger W (2009) TANDEM: integrating automated allele binning into genetics and genomics workflows. Bioinformatics 25(15):1982-1983. https://doi.org/10.1093/bioinformatics/btp30310.1093/bioinformatics/btp30319420055
]Search in Google Scholar
[
Mishima K, Watanabe A, Isoda K, Ubukata M, Tanaka K (2006) Isolation and characterization of microsatellite loci from Quercus mongolica var. crispula. Molecular Ecology Notes 6:695–697. https://doi.org/10.1111/j.1471-8286.2006.01313.x10.1111/j.1471-8286.2006.01313.x
]Search in Google Scholar
[
Nasir Y (1976) Flora of West Pakistan No. 104 Fagaceae. Karachi: University Karachi, ASIN B004Z2MEK8.
]Search in Google Scholar
[
Nautiyal A (2015) Is Chir pine displacing banj oak in the central Himalaya? Socioeconomic implications for local people and the conservation of oak forest biodiversity (doctoral dissertation). University of Arkansas, Fayetteville. https://scholarworks.uark.edu/etd/133
]Search in Google Scholar
[
Negi SS, Naithani HB (1995) Oaks of India, Nepal and Bhutan. Dehradun, India: International Book Distributors, 266 p, ISBN 8170892333.
]Search in Google Scholar
[
Pandey A, Tamta S (2014) In Vitro Propagation of the important tasar oak (Quercus serrata Thunb.) by casein hydrolysate promoted high frequency shoot proliferation. Journal of Sustainable Forestry 33:590–603. https://doi.org/10.1080/10549811.2014.91258710.1080/10549811.2014.912587
]Search in Google Scholar
[
Pandey A, Tamta S (2015) High-molecular-weight DNA extraction from six Quercus species of Kumaun Himalaya, India. International Journal of Advanced Research 3:30-34.
]Search in Google Scholar
[
Parker RN (1939) Two natural hybrids. Indian forester 65:585-586.
]Search in Google Scholar
[
Peakall R, Smouse PE (2006) GENALEX 6: Genetic analysis in Excel. Population genetic software for teaching and research. Molecular Ecology Notes 6:288–295. https://doi:10.1093/bioinformatics/bts46010.1093/bioinformatics/bts460346324522820204
]Search in Google Scholar
[
Petit RJ, Bodenes C, Ducousso A, Roussel G, Kremer A (2004) Hybridization as a mechanism of invasion in oaks. New Phytologist 161:151-164. https://doi.org/10.1046/j.1469-8137.2003.00944.x10.1046/j.1469-8137.2003.00944.x
]Search in Google Scholar
[
Pettenkofer T, Finkeldey R, Muller M, Krutovsky KV, Vornam B, Leinemann L, Gailing O (2020) Genetic variation of introduced red oak (Quercus rubra) stands in Germany compared to North American populations. European Journal of Forest Research 139:321-331. https://doi.org/10.1007/s10342-019-01256-510.1007/s10342-019-01256-5
]Search in Google Scholar
[
Poudel RC, Möller M, Liu J, Gao LM, Baral SR, Li DZ (2014) Low genetic diversity and high inbreeding of the endangered yews in Central Himalaya: implications for conservation of their highly fragmented populations. Biodiversity Research 20:1270-1284. https://doi.org/10.1111/ddi.1223710.1111/ddi.12237
]Search in Google Scholar
[
Rai KC, Ginwal HS (2018) Microsatellite Analysis to Study Genetic Diversity in Khasi Pine (Pinus Kesiya Royle Ex. Gordon) Using Chloroplast SSR Markers. Silvae Genetica 67:99-105. https://doi.org/10.2478/sg-2018-001410.2478/sg-2018-0014
]Search in Google Scholar
[
Saha MC, Mian MAR, Eujayl I, Zwonitzer JC, Wang L, May GD (2004) Tall fescue EST-SSR markers with transferability across several grass species. Theoretical and Applied Genetics 109:783–791. https://doi.org/10.1007/s00122-004-1681-110.1007/s00122-004-1681-115205737
]Search in Google Scholar
[
Saha R (2018) Genetic Diversity in Quercus leucotrichophora Populations through RAPD Marker. International Journal of Agriculture, Environment and Biotechnology 11:1. http://doi.org/10.30954/0974-1712.2018.00178.13
]Search in Google Scholar
[
Saran S, Joshi R, Sharma S, Padalia H, Dadhwal VK (2010) Geospatial modeling of brown oak (Quercus semecarpifolia Sm.) habitats in the Kumaun Himalaya under climate change scenario. Journal of the Indian Society of Remote Sensing 38:534–547. https://doi.org/10.1007/s12524-010-0038-210.1007/s12524-010-0038-2
]Search in Google Scholar
[
Saxena AK, Singh JS (1982) A phytosociological analysis of woody species in forest communities of a part of Kumaun Himalaya. Vegetatio 50:3-22. https://doi.org/10.1007/BF0012067410.1007/BF00120674
]Search in Google Scholar
[
Sharma RK, Gupta P, Sharma V, Sood A, Mohapatra T, Ahuja PS (2008) Evaluation of rice and sugarcane SSR markers for phylogenetic and genetic diversity analyses in bamboo. Genome 51: 91-103. http://doi.org/10.1139/g07-10110.1139/G07-10118356943
]Search in Google Scholar
[
Sharma V, Bhardwaj P, Kumar R, Sharma RK, Sood A, Ahuja PS (2009) Identification and cross-species amplification of EST derived SSR markers in different bamboo species. Conservation Genetics 10(3):721-724. http://doi.org/10.1007/s10592-008-9630-110.1007/s10592-008-9630-1
]Search in Google Scholar
[
Shrestha BB (2003) Quercus semecarpifolia Sm. in the Himalayan region: Ecology, exploitation and threats. Himalayan Journal of Sciences 1:126–128. http://doi.org/10.3126/hjs.v1i2.21210.3126/hjs.v1i2.212
]Search in Google Scholar
[
Singh JS, Singh SP (1992) Forest of Himalaya: structure, functioning, and impact of man. Nainital, India: Gyanodaya Prakashan, 294 p, ISBN 8185097259.
]Search in Google Scholar
[
Singh JS, Rawat YS, Chaturvedi OP (1984) Replacement of oak forest with pine in the Himalaya affects the nitrogen cycle. Nature 311:54-56. http://doi.org/10.1038/311054a010.1038/311054a0
]Search in Google Scholar
[
Singh SP (2018) Research on Indian Himalayan tree line ecotone: an overview. Tropical Ecology 59:163–176. http://www.tropecol.com/pdf/open\PDF_59_2/01%20Surender%20P%20Singh.pdf
]Search in Google Scholar
[
Squirrell J, Hollongsworth PM, Woodhead M, Russell J, Lowe AJ, Gibby M, Powell W (2003) How much effort is required to isolate nuclear microsatellites from plants? Molecular Ecology 12:1339–1348. http://doi.org/10.1046/j.1365-294x.2003.01825.x10.1046/j.1365-294X.2003.01825.x12755865
]Search in Google Scholar
[
Srinivasan J (2006) Hottest decade: early warning or false alarm? Current Science 90(3): 273–274. http://www.jstor.org/stable/24091848
]Search in Google Scholar
[
Steinkellner H, Lexer C, Turetschek E, Glossl J (1997a) Conservation of (GA), microsatellite loci between Quercus species. Molecular Ecology 6:1189-1194. https://doi.org/10.1046/j.1365-294X.1997.00288.x10.1046/j.1365-294X.1997.00288.x
]Search in Google Scholar
[
Steinkellner H, Fluch S, Turetschek E, Lexer C, Streiff R, Kremer A (1997b) Identification and characterization of (GA/CT)n microsatellite loci from Quercus petraea. Plant Molecular Biology 33:1093–1096. https://doi.org/10.1023/A:100573672279410.1023/A:1005736722794
]Search in Google Scholar
[
Troup RS (1921) The silviculture of Indian trees Volume III. Oxford, UK: Claxeudon Press, 1195 p. http://cslrepository.nvli.in//handle/123456789/8253
]Search in Google Scholar
[
Ueno S, Tsumura Y (2008) Development of ten microsatellite markers for Quercus mongolica var. crispula by database mining. Conservation Genetics 9:1083–1085. https://doi.org/10.1007/s10592-007-9462-410.1007/s10592-007-9462-4
]Search in Google Scholar
[
Ueno S, Taguchi Y, Tsumura Y (2008) Microsatellite markers derived from Quercus mongolica var. crispula (Fagaceae) inner bark expressed sequence tags. Genes & Genetic Systems 83:179–187. https://doi.org/10.1266/ggs.83.17910.1266/ggs.83.17918506101
]Search in Google Scholar
[
Upreti N, Tewari JC, Singh SP (1985) The oak forests of Kumaun Himalaya (India): Composition, Diversity, and regeneration. Mountain Research and Development 5:163-174. https://doi.org/10.2307/367325510.2307/3673255
]Search in Google Scholar
[
Varshney RK, Graner A, Sorrells ME (2005) Genic microsatellite markers in plants: Features and applications. Trends in Biotechnology 23:48–55. https://doi.org/10.1016/j.tibtech.2004.11.00510.1016/j.tibtech.2004.11.00515629858
]Search in Google Scholar
[
Yeh FC, Yang RC, Boyles TBJ, Ye ZH, Mao JX (1999) POPGENE version 1.32: microsoft window-based freeware for population genetics analysis. Molecular Biology and Biotechnology Centre, University of Alberta, Edmonton. https://www.semanticscholar.org/paper/POPGENE-Version-1.32Microsoft-Windows-based-for-of-YehYang/8e77cff2b4a1feaed3a93a2a7a3116c9fc0e95b8
]Search in Google Scholar
[
Zane L, Bargelloni L, Patarnello T (2002) Strategies for microsatellite isolation: A review. Molecular Ecology 11:1–16. https://doi.org/10.1046/j.0962-1083.2001.01418.x10.1046/j.0962-1083.2001.01418.x11903900
]Search in Google Scholar
[
Zhang LY, Bernard M, Leroy P, Feuillet C, Sourdille P (2005) High transferability of bread wheat EST-derived SSRs to other cereals. Theoretical and Applied Genetics 111:677–687. https://doi.org/10.1007/s00122-005-2041-510.1007/s00122-005-2041-516034582
]Search in Google Scholar