Utilisation of Actiphage in combination with IS900 qPCR as a diagnostic tool for rapid determination of paratuberculosis infection status in small ruminant herds
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.
Aly S.S., Anderson R.J., Whitlock R.H., Fyock T.L., McAdam S., Adaska J.M., Jiang J., Gardner I.A.: Reliability of environmental sampling to quantify Mycobacterium avium subspecies paratuberculosis on California free-stall dairies. J Dairy Sci 2009, 92, 3634–3642, doi: 10.3168/jds.2008-1680.AlyS.S.AndersonR.J.WhitlockR.H.FyockT.L.McAdamS.AdaskaJ.M.JiangJ.GardnerI.A.:Reliability of environmental sampling to quantify Mycobacterium avium subspecies paratuberculosis on California free-stall dairies.2009,92,3634–3642, doi:10.3168/jds.2008-1680.Open DOISearch in Google Scholar
Beinhauerova M., Slana I.: Phage amplification assay for detection of mycobacterial infection: a review. Microorganisms 2021, 9, 237, doi: 10.3390/microorganisms9020237.BeinhauerovaM.SlanaI.:Phage amplification assay for detection of mycobacterial infection: a review.2021,9,237, doi:10.3390/microorganisms9020237.Open DOISearch in Google Scholar
Berghaus R.D., Farver T.B., Anderson R.J., Jaravata C.C., Gardner I.A.: Environmental sampling for detection of Mycobacterium avium ssp. paratuberculosis on large California dairies. J Dairy Sci 2006, 89, 963–970, doi: 10.3168/jds.S0022-0302(06)72161-0.BerghausR.D.FarverT.B.AndersonR.J.JaravataC.C.GardnerI.A.:Environmental sampling for detection of Mycobacterium avium ssp. paratuberculosis on large California dairies.2006,89,963–970, doi:10.3168/jds.S0022-0302(06)72161-0.Open DOISearch in Google Scholar
Corbett C.S., Buck J.D., Barkema H.W.: Effects of freezing on ability to detect Mycobacterium avium subsp. paratuberculosis from bovine tissues following culture. J Vet Diagn Invest 2018, 30, 743–746, doi: 10.1177/1040638718790781.CorbettC.S.BuckJ.D.BarkemaH.W.:Effects of freezing on ability to detect Mycobacterium avium subsp. paratuberculosis from bovine tissues following culture.2018,30,743–746, doi:10.1177/1040638718790781.Open DOISearch in Google Scholar
Eisenberg S.W.F., Nielen M., Santema W., Houwers D.J., Heederik D., Koets A.P.: Detection of spatial and temporal spread of Mycobacterium avium subsp. paratuberculosis in the environment of a cattle farm through bio-aerosols. Vet Microbiol 2010, 143, 284–292, doi: 10.1016/j.vetmic.2009.11.033.EisenbergS.W.F.NielenM.SantemaW.HouwersD.J.HeederikD.KoetsA.P.:Detection of spatial and temporal spread of Mycobacterium avium subsp. paratuberculosis in the environment of a cattle farm through bio-aerosols.2010,143,284–292, doi:10.1016/j.vetmic.2009.11.033.Open DOISearch in Google Scholar
Foddai A., Elliott C.T., Grant I.R.: Optimization of a phage amplification assay to permit accurate enumeration of viable Mycobacterium avium subsp. paratuberculosis cells. Appl Environ Microbiol 2009, 75, 3896–3902, doi: 10.1128/AEM.00294-09.FoddaiA.ElliottC.T.GrantI.R.:Optimization of a phage amplification assay to permit accurate enumeration of viable Mycobacterium avium subsp. paratuberculosis cells.2009,75,3896–3902, doi:10.1128/AEM.00294-09.Open DOISearch in Google Scholar
Hahn N., Failing K., Eisenberg T., Schlez K., Zschöck P.-M., Donat K., Einax E., Köhler H.: Evaluation of different diagnostic methods for the detection of Mycobacterium avium subsp. paratuberculosis in boot swabs and liquid manure samples. BMC Vet Res 2017, 13, 259, doi: 10.1186/s12917-017-1173-6.HahnN.FailingK.EisenbergT.SchlezK.ZschöckP.-M.DonatK.EinaxE.KöhlerH.:Evaluation of different diagnostic methods for the detection of Mycobacterium avium subsp. paratuberculosis in boot swabs and liquid manure samples.2017,13,259, doi:10.1186/s12917-017-1173-6.Open DOISearch in Google Scholar
Halstrom S., Price P., Thomson R.: Review: Environmental mycobacteria as a cause of human infection. Int J Mycobacteriol 2015, 4, 81–91, doi: 10.1016/j.ijmyco.2015.03.002.HalstromS.PriceP.ThomsonR.:Review: Environmental mycobacteria as a cause of human infection.2015,4,81–91, doi:10.1016/j.ijmyco.2015.03.002.Open DOISearch in Google Scholar
Kopecna M., Parmova I., Dvorska-Bartosova L., Moravkova M., Babak V., Pavlik I.: Distribution and transmission of Mycobacterium avium subspecies paratuberculosis in farmed red deer (Cervus elaphus) studied by faecal culture, serology and IS900 FRLP examinations. Vet Med 2008, 53, 510–523, doi: 10.17221/1980-VETMED.KopecnaM.ParmovaI.Dvorska-BartosovaL.MoravkovaM.BabakV.PavlikI.:Distribution and transmission of Mycobacterium avium subspecies paratuberculosis in farmed red deer (Cervus elaphus) studied by faecal culture, serology and IS900 FRLP examinations.2008,53,510–523, doi:10.17221/1980-VETMED.Open DOISearch in Google Scholar
Kralik P., Pribylova-Dziedzinska R., Kralova A., Kovarcik K., Slana I.: Evidence of passive faecal shedding of Mycobacterium avium subsp. paratuberculosis in a Limousin cattle herd. Vet J 2014, 201, 91–94, doi: 10.1016/j.tvjl.2014.02.011.KralikP.Pribylova-DziedzinskaR.KralovaA.KovarcikK.SlanaI.:Evidence of passive faecal shedding of Mycobacterium avium subsp. paratuberculosis in a Limousin cattle herd.2014,201,91–94, doi:10.1016/j.tvjl.2014.02.011.Open DOISearch in Google Scholar
Leite F.L., Stokes K.D., Robbe-Austerman S., Stabel J.R.: Comparison of fecal DNA extraction kits for the detection of Mycobacterium avium subsp. paratuberculosis by polymerase chain reaction. J Vet Diagn Invest 2013, 25, 27–34, doi: 10.1177/1040638712466395.LeiteF.L.StokesK.D.Robbe-AustermanS.StabelJ.R.:Comparison of fecal DNA extraction kits for the detection of Mycobacterium avium subsp. paratuberculosis by polymerase chain reaction.2013,25,27–34, doi:10.1177/1040638712466395.Open DOISearch in Google Scholar
Marcé C., Ezanno P., Seegers H., Pfeiffer D.U., Fourichon C.: Within-herd contact structure and transmission of Mycobacterium avium subspecies paratuberculosis in a persistently infected dairy cattle herd. Prev Vet Med 2011, 100, 116–125, doi: 10.1016/j.prevetmed.2011.02.004.MarcéC.EzannoP.SeegersH.PfeifferD.U.FourichonC.:Within-herd contact structure and transmission of Mycobacterium avium subspecies paratuberculosis in a persistently infected dairy cattle herd.2011,100,116–125, doi:10.1016/j.prevetmed.2011.02.004.Open DOISearch in Google Scholar
Mortensen H., Nielsen S.S., Berg P.: Genetic variation and heritability of the antibody response to Mycobacterium avium subspecies paratuberculosis in Danish Holstein cows. J Dairy Sci 2004, 87, 2108–2113, doi: 10.3168/jds.S0022-0302(04)70029-6.MortensenH.NielsenS.S.BergP.:Genetic variation and heritability of the antibody response to Mycobacterium avium subspecies paratuberculosis in Danish Holstein cows.2004,87,2108–2113, doi:10.3168/jds.S0022-0302(04)70029-6.Open DOISearch in Google Scholar
Pelletier C., Haas C., Dangien C., Meunier A., Caplain C., Pez F., Potaufeux V., Clarke B., Rees C., Swift B., Sellal E.: Detection of active infection of new-born calves by Mycobacterium avium subsp. paratuberculosis (MAP) in first days of life. Proceedings of the 5th Congress of the European Association of Veterinary Laboratory Diagnosticians, Brussels, Belgium, 14th–17th October 2018, pp. 18–19.PelletierC.HaasC.DangienC.MeunierA.CaplainC.PezF.PotaufeuxV.ClarkeB.ReesC.SwiftB.SellalE.:.Proceedings of the 5th Congress of the European Association of Veterinary Laboratory Diagnosticians,Brussels, Belgium,14th–17th October 2018,18–19.Search in Google Scholar
Rybniker J., Kramme S., Small P.L.: Host range of 14 mycobacteriophages in Mycobacterium ulcerans and seven other mycobacteria including Mycobacterium tuberculosis – Application for identification and susceptibility testing. J Med Microbiol 2006, 55, 37–42, doi: 10.1099/jmm.0.46238-0.RybnikerJ.KrammeS.SmallP.L.:Host range of 14 mycobacteriophages in Mycobacterium ulcerans and seven other mycobacteria including Mycobacterium tuberculosis – Application for identification and susceptibility testing.2006,55,37–42, doi:10.1099/jmm.0.46238-0.Open DOISearch in Google Scholar
Sevilla I.A., Molina E., Elguezabal N., Perez V., Garrido J.M., Juste R.A.: Detection of mycobacteria, Mycobacterium avium subspecies and Mycobacterium tuberculosis complex by a novel tetraplex real-time PCR. J Clin Microbiol 2015, 53, 930–940, doi: 10.1128/JCM.03168-14.SevillaI.A.MolinaE.ElguezabalN.PerezV.GarridoJ.M.JusteR.A.:Detection of mycobacteria, Mycobacterium avium subspecies and Mycobacterium tuberculosis complex by a novel tetraplex real-time PCR.2015,53,930–940, doi:10.1128/JCM.03168-14.Open DOISearch in Google Scholar
Sharp S.E., Lemes M., Sierra S.G., Poniecka A., Poppiti R.J.: Löwenstein-Jensen media. No longer necessary for mycobacterial isolation. Am J Clin Pathol 2000, 113, 770–773, doi: 10.1309/JHDD-1HF4-2KCN-7ANP.SharpS.E.LemesM.SierraS.G.PonieckaA.PoppitiR.J.:Löwenstein-Jensen media. No longer necessary for mycobacterial isolation.2000,113,770–773, doi:10.1309/JHDD-1HF4-2KCN-7ANP.Open DOISearch in Google Scholar
Slana I., Kralik P., Kralova A., Pavlik I.: On-farm spread of Mycobacterium avium subsp. paratuberculosis in raw milk studied by IS900 and F57 competitive real time quantitative PCR and culture examination. Int J Food Microbiol 2008, 128, 250–257, doi: 10.1016/j.ijfoodmicro.2008.08.013.SlanaI.KralikP.KralovaA.PavlikI.:On-farm spread of Mycobacterium avium subsp. paratuberculosis in raw milk studied by IS900 and F57 competitive real time quantitative PCR and culture examination.2008,128,250–257, doi:10.1016/j.ijfoodmicro.2008.08.013.Open DOISearch in Google Scholar
Stanley E.C., Mole R.J., Smith R.J., Glenn S.M., Barer M.R., McGowan M., Rees C.E.D.: Development of a new, combined rapid method using phage and PCR for detection and identification of viable Mycobacterium paratuberculosis bacteria within 48 hours. Appl Environ Microbiol 2007, 73, 1851–1857, doi: 10.1128/AEM.01722-06.StanleyE.C.MoleR.J.SmithR.J.GlennS.M.BarerM.R.McGowanM.ReesC.E.D.:Development of a new, combined rapid method using phage and PCR for detection and identification of viable Mycobacterium paratuberculosis bacteria within 48 hours.2007,73,1851–1857, doi:10.1128/AEM.01722-06.Open DOISearch in Google Scholar
Swift B.M.C., Meade N., Barron E.S., Bennett M., Perehenic T., Hughes V., Stevenson K., Rees C.E.D.: The development and use of Actiphage® to detect viable mycobacteria from bovine tuberculosis and Johne’s disease-infected animals. Microb Biotechnol 2020, 13, 738–746, doi: 10.1111/1751-7915.13518.SwiftB.M.C.MeadeN.BarronE.S.BennettM.PerehenicT.HughesV.StevensonK.ReesC.E.D.:The development and use of Actiphage® to detect viable mycobacteria from bovine tuberculosis and Johne’s disease-infected animals.2020,13,738–746, doi:10.1111/1751-7915.13518.Open DOISearch in Google Scholar
Tavornpanich S., Munoz-Zanzi C.A., Wells S.J., Raizman E.A., Carpenter T.E., Johnson W.O., Gardner I.A.: Simulation model for evaluation of testing strategies for detection of paratuberculosis in Midwestern US dairy herds. Prev Vet Med 2008, 83, 65–82, doi: 10.1016/j.prevetmed.2007.06.010.TavornpanichS.Munoz-ZanziC.A.WellsS.J.RaizmanE.A.CarpenterT.E.JohnsonW.O.GardnerI.A.:Simulation model for evaluation of testing strategies for detection of paratuberculosis in Midwestern US dairy herds.2008,83,65–82, doi:10.1016/j.prevetmed.2007.06.010.Open DOISearch in Google Scholar
Verma R., Swift B., Handley-Hartill W., Lee J., Woltmann G., Rees C., Haldar P.: A novel high sensitivity bacteriophage based assay identifies low level M. tuberculosis bacteremia in immunocompetent patients with active and incipient TB. Clin Infect Dis 2020, 70, 933–936, doi: 10.1093/cid/ciz548.VermaR.SwiftB.Handley-HartillW.LeeJ.WoltmannG.ReesC.HaldarP.:A novel high sensitivity bacteriophage based assay identifies low level M. tuberculosis bacteremia in immunocompetent patients with active and incipient TB.2020,70,933–936, doi:10.1093/cid/ciz548.Open DOISearch in Google Scholar
Whittington R.J., Marshall D.J., Nicholls P.J., Marsh A.B., Reddacliff L.A.: Survival and dormancy of Mycobacterium avium subsp. paratuberculosis in the environment. Appl Environ Microbiol 2004, 70, 2989–3004, doi: 10.1128/AEM.70.5.2989-3004.2004.WhittingtonR.J.MarshallD.J.NichollsP.J.MarshA.B.ReddacliffL.A.:Survival and dormancy of Mycobacterium avium subsp. paratuberculosis in the environment.2004,70,2989–3004, doi:10.1128/AEM.70.5.2989-3004.2004.Open DOISearch in Google Scholar
Whittington R.J., Sergeant E.: Progress towards understanding the spread, detection and control of Mycobacterium avium subsp. paratuberculosis in animal populations. Aust Vet J 2001, 79, 267–278, doi: 10.1111/j.1751-0813.2001.tb11980.x.WhittingtonR.J.SergeantE.:Progress towards understanding the spread, detection and control of Mycobacterium avium subsp. paratuberculosis in animal populations.2001,79,267278, doi:10.1111/j.1751-0813.2001.tb11980.x.Open DOISearch in Google Scholar
Wolf R., Barkema H.W., De Buck J., Orsel K.: Sampling location, herd size, and season influence Mycobacterium avium ssp. paratuberculosis environmental culture results. J Dairy Sci 2015, 98, 275–287, doi: 10.3168/jds.2014-8676.WolfR.BarkemaH.W.De BuckJ.OrselK.:Sampling location, herd size, and season influence Mycobacterium avium ssp. paratuberculosis environmental culture results.2015,98,275–287, doi:10.3168/jds.2014-8676.Open DOISearch in Google Scholar