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Progress and Knowledge Transfer from Science to Technology in the Research Frontier of CRISPR Based on the LDA Model

INFORMAZIONI SU QUESTO ARTICOLO

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Figure 1

Growth of publication numbers (a) and keywords co-occurrence networks (b) regarding CRISPR in 2011–2020.
Growth of publication numbers (a) and keywords co-occurrence networks (b) regarding CRISPR in 2011–2020.

Figure 2

The layout of topics on CRISPR by the method of LDAvis (an example with topic 1 selected).
The layout of topics on CRISPR by the method of LDAvis (an example with topic 1 selected).

Figure 3

The number of publications in each topic from 2011 to 2020 (per year).
The number of publications in each topic from 2011 to 2020 (per year).

Figure 4

The percentage of publications in each topic from 2011 to 2020 (per year).
The percentage of publications in each topic from 2011 to 2020 (per year).

Figure 5

Knowledge transfer from topics of articles to IPC-4 codes of patents.
Knowledge transfer from topics of articles to IPC-4 codes of patents.

Detailed explanations of the top 10 IPC-4 classes.

Rank IPC-4 class Detailed meaning
1 C12N Microorganisms or Enzymes; Compositions Thereof; Propagating, Preserving, or Maintaining Microorganisms; Mutation or Genetic Engineering; Culture Media;
2 A61K Preparations for Medical, Dental, or Toilet Purposes;
3 C07K Peptides;
4 C12Q Measuring or Testing Processes Involving Enzymes, Nucleic Acids or Microorganisms; Compositions or Test Papers Therefor; Processes of Preparing Such Compositions; Condition-Responsive Control in Microbiological or Enzymological Processes;
5 A61P Specific Therapeutic Activity of Chemical Compounds or Medicinal Preparations;
6 A01K Animal Husbandry; Care of Birds, Fishes, Insects; Fishing; Rearing or Breeding Animals, Not Otherwise Provided for; New Breeds of Animals;
7 C12P Fermentation or Enzyme-Using Processes to Synthesise a Desired Chemical Compound or Composition or to Separate Optical Isomers from a Racemic Mixture;
8 G01N Investigating or Analyzing Materials by Determining Their Chemical or Physical Properties;
9 C07H Sugars; Derivatives Thereof; Nucleosides; Nucleotides; Nucleic Acids;
10 A01H New Plants or Processes for Obtaining Them; Plant Reproduction by Tissue Culture Techniques.

Relative strength of knowledge transition (SKT) between research topics and technological classes.

C12N A61K C07K C12Q A61P A01K C12P G01N C07H A01H Others Sum
topic 1 0.0122 0.0067 0.0034 0.0016 0.0029 0.0022 0.0001 0.0010 0.0005 0.0004 0.0014 0.03
topic 2 0.1070 0.0322 0.0212 0.0191 0.0103 0.0066 0.0057 0.0038 0.0037 0.0031 0.0168 0.23
topic 3 0.0023 0.0026 0.0007 0.0003 0.0020 0.0001 0.0001 0.0002 0.0001 0.0000 0.0015 0.01
topic 4 0.0278 0.0112 0.0064 0.0061 0.0039 0.0010 0.0012 0.0019 0.0019 0.0008 0.0031 0.07
topic 5 0.0038 0.0049 0.0020 0.0012 0.0032 0.0003 0.0000 0.0010 0.0001 0.0001 0.0016 0.02
topic 6 0.1493 0.0423 0.0286 0.0225 0.0128 0.0135 0.0058 0.0051 0.0047 0.0069 0.0143 0.31
topic 7 0.0291 0.0144 0.0083 0.0038 0.0042 0.0026 0.0007 0.0015 0.0007 0.0002 0.0039 0.07
topic 8 0.0040 0.0015 0.0005 0.0019 0.0006 0.0004 0.0001 0.0003 0.0001 0.0006 0.0007 0.01
topic 9 0.0018 0.0011 0.0003 0.0003 0.0004 0.0001 0.0005 0.0001 0.0001 0.0001 0.0017 0.01
topic 10 0.1213 0.0361 0.0275 0.0191 0.0105 0.0060 0.0042 0.0032 0.0054 0.0047 0.0140 0.25
Sum 0.46 0.15 0.1 0.08 0.05 0.03 0.02 0.02 0.02 0.02 0.05 1

Detailed data on paper-patent citations in CRISPR.

Publications NPRs % of NPRs Citing patents NPR transition rate Avg. FT (years)
topic 1 3,019 53 1.76% 512 0.17 0.87
topic 2 3,118 439 14.08% 4,443 1.42 1.12
topic 3 1,392 19 1.36% 149 0.11 1.11
topic 4 1,425 159 11.16% 1,220 0.86 1.18
topic 5 1,751 27 1.54% 290 0.17 0.63
topic 6 1,687 600 35.57% 5,926 3.51 1.07
topic 7 1,028 121 11.77% 1,252 1.22 1.07
topic 8 473 26 5.50% 204 0.43 0.88
topic 9 855 26 3.04% 107 0.13 1
topic 10 1,156 1,007 87.11% 4,882 4.22 1.09
total 15,904 2,477 15.57% 18,985 1.19 1.08

10 topics and corresponding words on CRISPR.

No Topic Top 20 most correlated words
#1 Gene mutation based on CRISPR/Cas9 mice; gene; development; mutations; model; function; mutant; cas9; protein; loss; disease; crispr; mutation; expression; knockout; type; mutations; using; results; mouse
#2 Genome editing based on CRISPR system crispr; genome; based; gene; can; genetic; editing; cas9; system; target; using; high; engineering; new; method; rna; single; technology; screening; tools
#3 Targeted therapies beta; expression; alpha; protein; induced; cells; signaling; receptor; stress; pathway; activation; response; increased; mediated; role; level; mir; regulation; factor; dependent
#4 Gene expression expression; protein; transcription; rna; gene; binding; cell; proteins; virus; dna; replication; regulation; transcriptional; promotor; infection; auxin; activation; complex; factor; human
#5 Human therapeutic cell; cancer; tumor; expression; proliferation; growth; knockout; crispr; resistance; inhibition; survival; cas9; apoptsis; lines; human; treatment; migration; patients; therapeutic; lung
#6 Biotechnology with CRISPR/Cas9 cas9; editing; crispr; dna; genome; target; gene; system; efficiency; mutations; mediated; base; repair; recombination; guide; using; efficient; homologous; single; double
#7 Genetic engineering human cells cell; gene; stem; human; cas9; crispr; delivery; expression; gfp; pluripotent; vivo; using; editing; protien; derived; system; retinal; mouse; knock; therapy
#8 CRISPR in agriculture crispr; rice; resistance; plant; detection; clustered; short; palindromic; regularly; interspaced; repeats; analysis; results; associated; study; pneumoniae; arabidopsis; pcr; toxin; clinical
#9 Genome analysis on strains genes; strains; strain; production; acid; genome; study; analysis; resistance; identified; biosynthesis; growth; species; genomic; isolated; metabolic; clusters; two; showed; genomes
#10 Mechanism of CRISPR/Cas crispr; cas; systems; dna; phage; bacterial; system; rna; proteins; type; sequence; cleavage; host; immunity; pam; complex; anti; immune; structure; plasmids
eISSN:
2543-683X
Lingua:
Inglese
Frequenza di pubblicazione:
4 volte all'anno
Argomenti della rivista:
Informatica, Tecnologia informatica, Project Management, Base dati e data mining