1. bookVolume 65 (2016): Edizione 1 (December 2016)
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Prima pubblicazione
22 Feb 2016
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1 volta all'anno
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Low genetic diversity in the endangered Taxus yunnanensis following a population bottleneck, a low effective population size and increased inbreeding

Pubblicato online: 12 Jun 2017
Volume & Edizione: Volume 65 (2016) - Edizione 1 (December 2016)
Pagine: 59 - 66
Dettagli della rivista
Prima pubblicazione
22 Feb 2016
Frequenza di pubblicazione
1 volta all'anno

Allison, TD (1990) Pollen production and plant density affect pollination and seed production in Taxus canadensis. Ecology 71(2):516–522. Available at https://doi.org/10.2307/194030510.2307/1940305Search in Google Scholar

Anderson, JT, Willis JH, Mitchell-Olds T (2011) Evolutionary genetics of plant adaptation. Trends in Genetics 27(7):258–266. Available at https://doi.org/10.1016/j.tig.2011.04.00110.1016/j.tig.2011.04.001Search in Google Scholar

Bian, FY, Su JR, Liu WD, Li SF, Lang XD (2015) The morphology of fresh seeds and germination of in vitro embryos for Taxus yunnanensis. Acta Ecol Sin 35(24):1–10. Available at https://doi.org/10.5846/stxb20140608118010.5846/stxb201406081180Search in Google Scholar

Blumenthal, A, Lerner HR, Werker E, Poljakoff-Mayber A (1986) Germination preventing mechanisms in Iris seeds. Ann Bot–London 58(4):551–561. Available at https://doi.org/10.1093/annbot/58.4.55110.1093/annbot/58.4.551Search in Google Scholar

Charlesworth, D, Wright SI (2001) Breeding systems and genome evolution. Curr Opin Genet Dev 11(6):685–690. Available at https://doi.org/10.1016/s0959-437x(00)00254-910.1016/S0959-437X(00)00254-9Search in Google Scholar

Chen, SY, Wu LY, Li JW, Xiang W, Zhou Y (2001) Study on genetic diversity of nature populations of Taxus yunnanensis. Scientia Silvae Sinicae 37(5):41–48.Search in Google Scholar

Chung, MG, Oh GS, Chung JM (1999) Allozyme variation in Korean populations of Taxus cuspidata (Taxaceae). Scand J Forest Res 14(2):103–110. Available at https://doi.org/10.1080/0282758995015282710.1080/02827589950152827Search in Google Scholar

Chybicki, IJ, Dering M, Iszkuło G, Meyza K, Suszka J (2016) Relative strength of fine-scale spatial genetic structure in paternally vs biparentally inherited DNA in a dioecious plant depends on both sex proportions and pollen-to-seed dispersal ratio. Heredity 117:449–459. Available at https://doi.org/10.1038/hdy.2016.6510.1038/hdy.2016.65511784327577692Search in Google Scholar

Chybicki, IJ, Oleksa A, Burczyk J (2011) Increased inbreeding and strong kinship structure in Taxus baccata estimated from both AFLP and SSR data. Heredity 107(6):589–600. Available at https://doi.org/10.1038/hdy.2011.5110.1038/hdy.2011.51324263621712844Search in Google Scholar

Curtu, AL, Craciunesc I, Enescu CM, Vidalis A, Sofletea N (2015) Fine-scale spatial genetic structure in a multi-oak-species (Quercus spp.) forest. iForest 8:324–332. Available at https://doi.org/10.3832/ifor1150-00710.3832/ifor1150-007Search in Google Scholar

Di Cosmo, L (2005) Confirmation of cosexuality in Taxus baccata L. Ital J Forest Mt En 60(5):641–650.Search in Google Scholar

Dubreuil, M, Riba M, González-Martínez SC, Vendramin GG, Sebastiani F, Mayol M (2010) Genetic effects of chronic habitat fragmentation revisited: Strong genetic structure in a temperate tree, Taxus baccata (Taxaceae), with great dispersal capability1. Am J Bot 97(2):303–310. Available at https://doi.org/10.3732/ajb.090014810.3732/ajb.090014821622391Search in Google Scholar

El-Kassaby, YA, Yanchuk AD (1994) Genetic diversity, differentiation, and inbreeding in Pacific yew from British Columbia. J Hered 85(2):112–117. Available at https://doi.org/10.1093/oxfordjournals.jhered.a11140710.1093/oxfordjournals.jhered.a111407Search in Google Scholar

Falconer, DS (1989) Introduction to quantitative genetics. Longman Scientific & Technical, New York. 3rd ed. 438p.Search in Google Scholar

Franceschinelli, EV, Bawa KS (2000) The effect of ecological factors on the mating system of a South American shrub species (Helicteres brevispira). Heredity 84:116–123. Available at https://doi.org/10.1046/j.1365-2540.2000.00636.x10.1046/j.1365-2540.2000.00636.x10692018Search in Google Scholar

Frankham, R (1995) Effective population size/adult population size ratios in wildlife: a review. Genet Res 66(2):95–107. Available at https://doi.org/10.1017/s001667230003445510.1017/S0016672300034455Search in Google Scholar

Frankham, R (2015) Genetic rescue of small inbred populations: meta-analysis reveals large and consistent benefits of gene flow. Mol Ecol 24(11):2610–2618. Available at https://doi.org/10.1111/mec.1313910.1111/mec.1313925740414Search in Google Scholar

Fu, LG, LiN, Mill RR (1999) Taxaceae. Flora of China 4:89–96.Search in Google Scholar

González-Martínez, SC, Dubreuil M, Riba M, Vendramin GG, Sebastiani F, Mayol M (2010) Spatial genetic structure of Taxus baccata L. in the western Mediterranean Basin: Past and present limits to gene movement over a broad geographic scale. Mol Phylogenet Evol 55(3):805–815. Available at https://doi.org/10.1016/j.ympev.2010.03.00110.1016/j.ympev.2010.03.00120211747Search in Google Scholar

Goudet, J (1995) FSTAT (Version 1.2): a computer program to calculate F-statistics. J Hered 86(6):485–486. Available at https://doi.org/10.1093/oxfordjournals.jhered.a11162710.1093/oxfordjournals.jhered.a111627Search in Google Scholar

Hai, P, Wen SZ, Li Y, Gao Y, Jiang XJ, Wang F (2014) New Taxane Diterpenoids from Taxus yunnanensis. Nat Prod Biop 4(1):47–51. Available at https://doi.org/10.1007/s13659-014-0003-910.1007/s13659-014-0003-9395697224660136Search in Google Scholar

Hardy, OJ, Vekemans X (2002) SPAGeDi: a versatile computer program to analyse spatial genetic structure at the individual or population levels. Mol Ecol Notes 2(4):618–620.10.1046/j.1471-8286.2002.00305.xSearch in Google Scholar

Hogg, KE, Mitchell AK, Clayton MR (1996) Confirmation of cosexuality in Pacific yew (Taxus brevifolia Nutt.). Great Basin Nat 56(4):377–378.Search in Google Scholar

Li, LF, Zhou Y, Wang DM (2005) Analysis of the endangered causes of Taxus yunnanensis. Journal of West China Forestry Science 34(3):30–34.Search in Google Scholar

Litkowiec, M, Plitta-Michalak BP, Lewandowski A, Iszkuło G (2015) Homogenous genetic structure in populations of Taxus baccata with varied proportions of male and female individuals. Silva Fenn 49(4):id 1236. Available at https://doi.org/10.14214/sf.123610.14214/sf.1236Search in Google Scholar

Loiselle, BA, Sork VL, Nason J, Graham C (1995) Spatial genetic structure of a tropical understory shrub, Psychotria officinalis (Rubiaceae). Am J Bot 82(11):1420–1425. Available at https://doi.org/10.2307/244586910.1002/j.1537-2197.1995.tb12679.xSearch in Google Scholar

Mace, GM, Lande R (1991) Assessing extinction threats: towards a reevaluation of IUCN threatened species categories. Conserv Biol 5(2):148–157. Available at https://doi.org/10.1111/j.1523-1739.1991.tb00119.x10.1111/j.1523-1739.1991.tb00119.xSearch in Google Scholar

Manoel, RO, Alves PF, Dourado CL, Gaino PSC, Freitas MLM, Moraes MLT, Sebbenn AM (2012) Contemporary pollen flow, mating patterns and effective population size inferred from paternity analysis in a small fragmented population of the Neotropical tree Copaifera langsdorffii Desf. (Leguminosae-Caesalpinioideae). Conserv Genet 13(3):613–623. Available at https://doi.org/10.1007/s10592-011-0311-010.1007/s10592-011-0311-0Search in Google Scholar

Martín, MA, Mattioni C, Lusini I, Molina JR, Cherubini M, Drake F, Herrera MA, Villani F, Martín LM (2014) New insights into the genetic structure of Araucaria araucana forests based on molecular and historic evidences. Tree Genet Genom 10(4):839–851. Available at https://doi.org/10.1007/s11295-014-0725-110.1007/s11295-014-0725-1Search in Google Scholar

Miao, YC, Lang XD, Zhang ZZ, Su JR (2014) Phylogeography and genetic effects of habitat fragmentation on endangered Taxus yunnanensis in southwest China as revealed by microsatellite data. Plant Biology 16(2):365–374. Available at https://doi.org/10.1111/plb.1205910.1111/plb.1205923890056Search in Google Scholar

Miao, YC, Su JR, Zhang ZJ, Lang XD, Liu WD, Li SF (2015) Microsatellite markers indicate genetic differences between cultivated and natural populations of endangered Taxus yunnanensis. Bot J Linn Soc 177(3):450–461. Available at https://doi.org/10.1111/boj.1224910.1111/boj.12249Search in Google Scholar

Miao, YC, Su JR, Zhang ZJ, Li H, Luo J, Zhang YP (2008) Isolation and characterization of microsatellite markers for the endangered Taxus yunnanensis. Conserv Genet 9(6):1683–1685. Available at https://doi.org/10.1007/s10592-008-9532-210.1007/s10592-008-9532-2Search in Google Scholar

Myking, T, Vakkari P, Skrøppa T (2009) Genetic variation in northern marginal Taxus baccata L. populations. Implications for conservation. Forestry 82(5):529–539. Available at https://doi.org/10.1093/forestry/cpp02210.1093/forestry/cpp022Search in Google Scholar

Nevo, E, Beiles A, Ben-Shlomo R (1984) The evolutionary significance of genetic diversity: ecological, demographic and life history correlates. Lect Notes Biomath 53:13–213. Available at https://doi.org/10.1007/978-3-642-51588-0_210.1007/978-3-642-51588-0_2Search in Google Scholar

Ortiz, PL, Arista M, Talavera S (2002) Sex ratio and reproductive effort in the dioecious Juniperus communis subsp. alpina (Suter) Čelak. (Cupressaceae) along an altitudinal gradient. Ann Bot–London 89(2):205–211. Available at https://doi.org/10.1093/aob/mcf02810.1093/aob/mcf028423379312099351Search in Google Scholar

Peakall, ROD, Smouse PE (2006) GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Mol Ecol Notes 6(1):288–295. Available at https://doi.org/10.1111/j.1471-8286.2005.01155.x10.1111/j.1471-8286.2005.01155.xSearch in Google Scholar

Piry, S, Luikart G, Cornuet JM (1999) Bottleneck: a computer program for detecting recent reductions in the effective population size using allele frequency data. J Hered 90(4):502–503. Available at https://doi.org/10.1093/jhered/90.4.50210.1093/jhered/90.4.502Search in Google Scholar

Pollak, E (1987) On the theory of partially inbreeding populations. I. Partial selfing. Genetics 117(2):353–360.Search in Google Scholar

Poudel, RC, Möller M, Li DZ, Shah A, Gao LM (2014) Genetic diversity, demographical history and conservation aspects of the endangered yew tree Taxus contorta (syn. Taxus fuana) in Pakistan. Tree Genet Genom 10(3):653–665. Available at https://doi.org/10.1007/s11295-014-0711-710.1007/s11295-014-0711-7Search in Google Scholar

Pritchard, JK, Stephens M, Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics 155(2):945–959.10.1093/genetics/155.2.945146109610835412Search in Google Scholar

Sjölund, MJ, Jump AS (2015) Coppice management of forests impacts spatial genetic structure but not genetic diversity in European beech (Fagus sylvatica L.). For Ecol Manag 336(15):65–71. Available at https://doi.org/10.1016/j.foreco.2014.10.01510.1016/j.foreco.2014.10.015Search in Google Scholar

State Forestry Bureau (1999) A list of key wild plants under state protection. Available at http://www.gov.cn/gongbao/content/2000/content_60072.htm.Search in Google Scholar

Vekemans, X, Hardy OJ (2004) New insights from fine-scale spatial genetic structure analyses in plant populations. Mol Ecol 13(4):921–935. Available at https://doi.org/10.1046/j.1365-294x.2004.02076.x10.1046/j.1365-294X.2004.02076.x15012766Search in Google Scholar

Vu, DD, Bui TTX, Nguyen MT, Vu DG, Nguyen MD, Bui VT, Huang X, Zhang Y (2016) Genetic diversity in two threatened species in Vietnam: Taxus chinensis and Taxus wallichiana. J For Res DOI: 10.1007/s11676-016-0323-1. Available at https://doi.org/10.1007/s11676-016-0323-110.1007/s11676-016-0323-1Search in Google Scholar

Wang, BY, Su JR, Fernando DD, Yang ZH, Zhang ZJ, Chen XM, Zhang YP (2008) Development of the male reproductive structures in Taxus yunnanensis. Plant Syst Evol 276(1):51–58. Available at https://doi.org/10.1007/s00606-008-0079-y10.1007/s00606-008-0079-ySearch in Google Scholar

Wang, WB, Jiang YB, Wang DM, Zhou Y, Jing YB (2006) Biological and ecological characteristics of Taxus yunnanensis. Journal of West China Forestry Science 35(4):33–39.Search in Google Scholar

Waples, RS, Do C (2008) LDNE: a program for estimating effective population size from data on linkage disequilibrium. Mol Ecol Resour 8(4):753–756. Available at https://doi.org/10.1111/j.1755-0998.2007.02061.x10.1111/j.1755-0998.2007.02061.x21585883Search in Google Scholar

Wilson, P, Buonopane M, Allison TD (1996) Reproductive biology of the monoecious clonal shrub Taxus canadensis. Bull Torrey Bot Club 123(1):7–15. Available at https://doi.org/10.2307/299630110.2307/2996301Search in Google Scholar

Yang, L, Chen HG, Niu ZL, Shi WY (2011) A preliminary study on the seed dormancy breaking effect of germination soaking methods on Taxus yunnanensis. Hubei Agricultural Sciences 50(10):2057–2059.Search in Google Scholar

Yin, Y, Yu RM, Yang W, Yuan F, Yan CY, Song LY (2010) Structural characterization and anti-tumor activity of a novel heteropolysaccharide isolated from Taxus yunnanensis. Carbohydr Polym 82(3):543–548. Available at https://doi.org/10.1016/j.carbpol.2010.04.03810.1016/j.carbpol.2010.04.038Search in Google Scholar

Zhang, DQ, Zhou N (2013) Genetic diversity and population structure of the endangered conifer Taxus wallichiana var. mairei (Taxaceae) revealed by Simple Sequence Repeat (SSR) markers. Biochem Syst Ecol 49(13):107–114. Available at https://doi.org/10.1016/j.bse.2013.03.03010.1016/j.bse.2013.03.030Search in Google Scholar

Zhang, J, Yang CF, Yuan K (2012) Simultaneous Determination of 10-Deacetylbaccatin III, Cephalomannine and Taxol in Different Parts of Taxus Media with Different Growth Years by UPLC. Appl Mech Mater 108:326–330. Available at https://doi.org/10.4028/www.scientific.net/amm.108.32610.4028/www.scientific.net/AMM.108.326Search in Google Scholar

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