This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.
Amelio P, Portevin D, Hella J, Reither K, Kamwela L, Lweno O, Tumbo A, Geoffrey L, Ohmiti K, Ding S, et al. HIV infection functionally impairs Mycobacterium tuberculosis-specific CD4 and CD8 T-cell responses. J Virol. 2019 Feb 19;93(5):e01728-18. https://doi.org/10.1128/JVI.01728-18AmelioPPortevinDHellaJReitherKKamwelaLLwenoOTumboAGeoffreyLOhmitiKDingSet alHIV infection functionally impairs Mycobacterium tuberculosis-specific CD4 and CD8 T-cell responsesJ Virol2019Feb 19935e0172818https://doi.org/10.1128/JVI.01728-1810.1128/JVI.01728-18638408030541853Search in Google Scholar
Bell LCK, Noursadeghi M. Pathogenesis of HIV-1 and Mycobacterium tuberculosis co-infection. Nat Rev Microbiol. 2018 Feb;16(2): 80–90. https://doi.org/10.1038/nrmicro.2017.128BellLCKNoursadeghiMPathogenesis of HIV-1 and Mycobacterium tuberculosis co-infectionNat Rev Microbiol2018Feb1628090https://doi.org/10.1038/nrmicro.2017.12810.1038/nrmicro.2017.12829109555Search in Google Scholar
Brudey K, Driscoll JR, Rigouts L, Prodinger WM, Gori A, Al-Hajoj SA, Allix C, Aristimuño L, Arora J, Baumanis V, et al. Mycobacterium tuberculosis complex genetic diversity: mining the fourth international spoligotyping database (SpolDB4) for classification, population genetics and epidemiology. BMC Microbiol. 2006 Mar 6;6:23. https://doi.org/10.1186/1471-2180-6-23BrudeyKDriscollJRRigoutsLProdingerWMGoriAAl-HajojSAAllixCAristimuñoLAroraJBaumanisVet alMycobacterium tuberculosis complex genetic diversity: mining the fourth international spoligotyping database (SpolDB4) for classification, population genetics and epidemiologyBMC Microbiol2006Mar 6623https://doi.org/10.1186/1471-2180-6-2310.1186/1471-2180-6-23146841716519816Search in Google Scholar
Chen H, He L, Cai C, Liu J, Jia J, Ma L, Huang H, Wang L, Ni X, Gao J, et al. Characteristics of distribution of Mycobacterium tuberculosis lineages in China. Sci China Life Sci. 2018 Jun;61(6):651–659. https://doi.org/10.1007/s11427-017-9243-0ChenHHeLCaiCLiuJJiaJMaLHuangHWangLNiXGaoJet alCharacteristics of distribution of Mycobacterium tuberculosis lineages in ChinaSci China Life Sci2018Jun616651659https://doi.org/10.1007/s11427-017-9243-010.1007/s11427-017-9243-029790059Search in Google Scholar
Chen J, Tsolaki AG, Shen X, Jiang X, Mei J, Gao Q. Deletion-targeted multiplex PCR (DTM-PCR) for identification of Beijing/ W genotypes of Mycobacterium tuberculosis. Tuberculosis (Edinb). 2007 Sep;87(5):446–449. https://doi.org/10.1016/j.tube.2007.05.014Chen KS, Liu T, Lin RR, Peng YP, Xiong GC. Tuberculosis transmission and risk factors in a Chinese antimony mining community. Int J Tuberc Lung Dis. 2016 Jan;20(1):57–62. https://doi.org/10.5588/ijtld.15.0215ChenJTsolakiAGShenXJiangXMeiJGaoQDeletion-targeted multiplex PCR (DTM-PCR) for identification of Beijing/ W genotypes of Mycobacterium tuberculosisTuberculosis (Edinb)2007Sep875446449https://doi.org/10.1016/j.tube.2007.05.014ChenKS, Liu T, Lin RR, Peng YP, Xiong GC. Tuberculosis transmission and risk factors in a Chinese antimony mining community. Int J Tuberc Lung Dis. 2016 Jan;20(1)57-62https://doi.org/10.5588/ijtld.15.021510.1016/j.tube.2007.05.01417632035Search in Google Scholar
Chen Q, Peng L, Xiong G, Peng Y, Luo D, Zou L, Chen K. Recurrence is a noticeable cause of rifampicin-resistant Mycobacterium tuberculosis in the elderly population in Jiangxi, China. Front Public Health. 2019 Jul 19;7:182. https://doi.org/10.3389/fpubh.2019.00182Hertz D, Schneider B. Sex differences in tuberculosis. Semin Immunopathol. 2019 Mar;41(2):225–237. https://doi.org/10.1007/s00281-018-0725-6ChenQPengLXiongGPengYLuoDZouLChenKRecurrence is a noticeable cause of rifampicin-resistant Mycobacterium tuberculosis in the elderly population in Jiangxi, ChinaFront Public Health2019Jul 197182https://doi.org/10.3389/fpubh.2019.00182Hertz D, Schneider B. Sex differences in tuberculosis. Semin Immunopathol. 2019 Mar;41(2):225–237https://doi.org/10.1007/s00281-018-0725-610.3389/fpubh.2019.00182665940931380332Search in Google Scholar
Huang CC, Chu AL, Becerra MC, Galea JT, Calderón R, Contreras C, Yataco R, Zhang Z, Lecca L, Murray MB. Mycobacterium tuberculosis Beijing lineage and risk for tuberculosis in child household contacts, Peru. Emerg Infect Dis. 2020 Mar;26(3):568–578. https://doi.org/10.3201/eid2603.191314HuangCCChuALBecerraMCGaleaJTCalderónRContrerasCYatacoRZhangZLeccaLMurrayMBMycobacterium tuberculosis Beijing lineage and risk for tuberculosis in child household contacts, PeruEmerg Infect Dis2020Mar263568578https://doi.org/10.3201/eid2603.19131410.3201/eid2603.191314704584832091363Search in Google Scholar
Hunter PR, Gaston MA. Numerical index of the discriminatory ability of typing systems: an application of Simpson’s index of diversity. J Clin Microbiol. 1988 Nov;26(11):2465–2466. https://doi.org/10.1128/jcm.26.11.2465-2466.1988HunterPRGastonMANumerical index of the discriminatory ability of typing systems: an application of Simpson’s index of diversityJ Clin Microbiol1988Nov261124652466https://doi.org/10.1128/jcm.26.11.2465-2466.198810.1128/jcm.26.11.2465-2466.19882669213069867Search in Google Scholar
Iseman MD, Heifets LB. Rapid detection of tuberculosis and drug-resistant tuberculosis. N Engl J Med. 2006 Oct 12;355(15):1606–1608. https://doi.org/10.1056/NEJMe068173IsemanMDHeifetsLBRapid detection of tuberculosis and drug-resistant tuberculosisN Engl J Med2006Oct 123551516061608https://doi.org/10.1056/NEJMe06817310.1056/NEJMe06817317035655Search in Google Scholar
Jasenosky LD, Scriba TJ, Hanekom WA, Goldfeld AE. T cells and adaptive immunity to Mycobacterium tuberculosis in humans. Immunol Rev. 2015 Mar;264(1):74–87. https://doi.org/10.1111/imr.12274Khan PY, Yates TA, Osman M, Warren RM, van der Heijden Y, Padayatchi N, Nardell EA, Moore D, Mathema B, Gandhi N, et al. Transmission of drug-resistant tuberculosis in HIV-endemic settings. Lancet Infect Dis. 2019 Mar;19(3):E77–E88. https://doi.org/10.1016/S1473-3099(18)30537-1JasenoskyLDScribaTJHanekomWAGoldfeldAET cells and adaptive immunity to Mycobacterium tuberculosis in humansImmunol Rev2015Mar26417487https://doi.org/10.1111/imr.12274Khan PY, Yates TA, Osman M, Warren RM, van der Heijden Y, Padayatchi N, Nardell EA, Moore D, Mathema B, Gandhi N, et al. Transmission of drug-resistant tuberculosis in HIV-endemic settings. Lancet Infect Dis. 2019 Mar;19(3):E77–E88https://doi.org/10.1016/S1473-3099(18)30537-110.1111/imr.1227425703553Search in Google Scholar
Lin S, Wei S, Zhao Y, Dai Z, Lin J, Pang Y. Genetic diversity and drug susceptibility profiles of multidrug-resistant tuberculosis strains in Southeast China. Infect Drug Resist. 2021 Sep 28;14:3979–3989. https://doi.org/10.2147/IDR.S331516LinSWeiSZhaoYDaiZLinJPangYGenetic diversity and drug susceptibility profiles of multidrug-resistant tuberculosis strains in Southeast ChinaInfect Drug Resist2021Sep 281439793989https://doi.org/10.2147/IDR.S33151610.2147/IDR.S331516848728034611415Search in Google Scholar
Liu Y, Zhang X, Zhang Y, Sun Y, Yao C, Wang W, Li C. Characterization of Mycobacterium tuberculosis strains in Beijing, China: drug susceptibility phenotypes and Beijing genotype family transmission. BMC Infect Dis. 2018 Dec 14;18(1):658. https://doi.org/10.1186/s12879-018-3578-7LiuYZhangXZhangYSunYYaoCWangWLiCCharacterization of Mycobacterium tuberculosis strains in Beijing, China: drug susceptibility phenotypes and Beijing genotype family transmissionBMC Infect Dis2018Dec 14181658https://doi.org/10.1186/s12879-018-3578-710.1186/s12879-018-3578-7629505830547765Search in Google Scholar
Luo D, Chen Q, Xiong G, Peng Y, Liu T, Chen X, Zeng L, Chen K. Prevalence and molecular characterization of multidrug-resistant M. tuberculosis in Jiangxi province, China. Sci Rep. 2019 May 13; 9(1): 7315. https://doi.org/10.1038/s41598-019-43547-2LuoDChenQXiongGPengYLiuTChenXZengLChenKPrevalence and molecular characterization of multidrug-resistant Mtuberculosis in Jiangxi province, China. Sci Rep2019May 13917315https://doi.org/10.1038/s41598-019-43547-210.1038/s41598-019-43547-2651385631086215Search in Google Scholar
Ma AJ, Wang SF, Fan JL, Zhao B, He GX, Zhao YL. Genetic diversity and drug susceptibility of Mycobacterium tuberculosis isolates in a remote mountain area of China. Biomed Environ Sci. 2018 May; 31(5):351–362. https://doi.org/10.3967/bes2018.046MaAJWangSFFanJLZhaoBHeGXZhaoYLGenetic diversity and drug susceptibility of Mycobacterium tuberculosis isolates in a remote mountain area of ChinaBiomed Environ Sci2018May315351362https://doi.org/10.3967/bes2018.046Search in Google Scholar
Maeda S, Hang NT, Lien LT, Thuong PH, Hung NV, Hoang NP, Cuong VC, Hijikata M, Sakurada S, Keicho N. Mycobacterium tuberculosis strains spreading in Hanoi, Vietnam: Beijing sublineages, genotypes, drug susceptibility patterns, and host factors. Tuberculosis (Edinb). 2014 Dec;94(6):649–656. https://doi.org/10.1016/j.tube.2014.09.005MaedaSHangNTLienLTThuongPHHungNVHoangNPCuongVCHijikataMSakuradaSKeichoNMycobacterium tuberculosis strains spreading in Hanoi, Vietnam: Beijing sublineages, genotypes, drug susceptibility patterns, and host factorsTuberculosis (Edinb)2014Dec946649656https://doi.org/10.1016/j.tube.2014.09.00510.1016/j.tube.2014.09.00525459163Search in Google Scholar
Mathema B, Andrews JR, Cohen T, Borgdorff MW, Behr M, Glynn JR, Rustomjee R, Silk BJ, Wood R. Drivers of tuberculosis transmission. J Infect Dis. 2017 Nov 3;216(suppl_6):S644–S653. https://doi.org/10.1093/infdis/jix354MathemaBAndrewsJRCohenTBorgdorffMWBehrMGlynnJRRustomjeeRSilkBJWoodRDrivers of tuberculosis transmissionJ Infect Dis2017Nov 3216suppl_6S644S653https://doi.org/10.1093/infdis/jix35410.1093/infdis/jix354585384429112745Search in Google Scholar
Mohajeri P, Moradi S, Atashi S, Farahani A. Mycobacterium tuberculosis Beijing genotype in Western Iran: Distribution and drug resistance. J Clin Diagn Res. 2016 Oct;10(10):DC05-DC07. https://doi.org/10.7860/JCDR/2016/20893.8689MohajeriPMoradiSAtashiSFarahaniAMycobacterium tuberculosis Beijing genotype in Western Iran: Distribution and drug resistanceJ Clin Diagn Res2016Oct1010DC05DC07https://doi.org/10.7860/JCDR/2016/20893.868910.7860/JCDR/2016/20893.8689512167427891336Search in Google Scholar
Pang Y, Song Y, Xia H, Zhou Y, Zhao B, Zhao Y. Risk factors and clinical phenotypes of Beijing genotype strains in tuberculosis patients in China. BMC Infect Dis. 2012 Dec 17;12:354. https://doi.org/10.1186/1471-2334-12-354PangYSongYXiaHZhouYZhaoBZhaoYRisk factors and clinical phenotypes of Beijing genotype strains in tuberculosis patients in ChinaBMC Infect Dis2012Dec 1712354https://doi.org/10.1186/1471-2334-12-35410.1186/1471-2334-12-354353870523245430Search in Google Scholar
Rizvi SMS, Tarafder S, Anwar S, Perdigão J, Johora FT, Sattar H, Kamal SMM. Circulating strains of Mycobacterium tuberculosis: 24 loci MIRU-VNTR analysis in Bangladesh. Infect Genet Evol. 2020 Dec;86:104634. https://doi.org/10.1016/j.meegid.2020.104634RizviSMSTarafderSAnwarSPerdigãoJJohoraFTSattarHKamalSMMCirculating strains of Mycobacterium tuberculosis: 24 loci MIRU-VNTR analysis in BangladeshInfect Genet Evol2020Dec86104634https://doi.org/10.1016/j.meegid.2020.10463410.1016/j.meegid.2020.10463433186780Search in Google Scholar
Selander RK, Caugant DA, Ochman H, Musser JM, Gilmour MN, Whittam TS. Methods of multilocus enzyme electrophoresis for bacterial population genetics and systematics. Appl Environ Micro-biol. 1986 May;51(5):873–884. https://doi.org/10.1128/aem.51.5.873-884.1986SelanderRKCaugantDAOchmanHMusserJMGilmourMNWhittamTSMethods of multilocus enzyme electrophoresis for bacterial population genetics and systematicsAppl Environ Micro-biol1986May515873884https://doi.org/10.1128/aem.51.5.873-884.198610.1128/aem.51.5.873-884.19862389812425735Search in Google Scholar
Singh J, Sankar MM, Kumar P, Couvin D, Rastogi N, Singh S; Indian TB Diagnostics Network. Genetic diversity and drug susceptibility profile of Mycobacterium tuberculosis isolated from different regions of India. J Infect. 2015 Aug;71(2):207–219. https://doi.org/10.1016/j.jinf.2015.04.028SinghJSankarMMKumarPCouvinDRastogiNSinghS; Indian TB Diagnostics NetworkGenetic diversity and drug susceptibility profile of Mycobacterium tuberculosis isolated from different regions of IndiaJ Infect2015Aug712207219https://doi.org/10.1016/j.jinf.2015.04.02810.1016/j.jinf.2015.04.02825934327Search in Google Scholar
Small PM, Hopewell PC, Singh SP, Paz A, Parsonnet J, Ruston DC, Schecter GF, Daley CL, Schoolnik GK. The epidemiology of tuberculosis in San Francisco – A population-based study using conventional and molecular methods. N Engl J Med. 1994 Jun 16; 330(24): 1703–1709. https://doi.org/10.1056/NEJM199406163302402SmallPMHopewellPCSinghSPPazAParsonnetJRustonDCSchecterGFDaleyCLSchoolnikGKThe epidemiology of tuberculosis in San Francisco – A population-based study using conventional and molecular methodsN Engl J Med1994Jun 163302417031709https://doi.org/10.1056/NEJM19940616330240210.1056/NEJM1994061633024027910661Search in Google Scholar
Song SE, Kim DH, Kim SH, Park MS, Park SH, Lee KS. Spoligotype variation of Mycobacterium tuberculosis strains prevailing in Korea. Can J Infect Dis Med Microbiol. 2020 Dec 31;2020:8874309. https://doi.org/10.1155/2020/8874309SongSEKimDHKimSHParkMSParkSHLeeKSSpoligotype variation of Mycobacterium tuberculosis strains prevailing in KoreaCan J Infect Dis Med Microbiol2020Dec 3120208874309https://doi.org/10.1155/2020/887430910.1155/2020/8874309779056333488887Search in Google Scholar
WHO. Global tuberculosis report 2020 [Internet]. Geneva (Switzerland): World Health Organization; 2020 [cited 2022 Mar 01]. Available from https://www.who.int/publications/i/item/9789240013131WHOGlobal tuberculosis report 2020 [Internet]Geneva (Switzerland)World Health Organization2020[cited 2022 Mar 01]. Available fromhttps://www.who.int/publications/i/item/9789240013131Search in Google Scholar
Yang C, Luo T, Sun G, Qiao K, Sun G, DeRiemer K, Mei J, Gao Q. Mycobacterium tuberculosis Beijing strains favor transmission but not drug resistance in China. Clin Infect Dis. 2012 Nov;55(9):1179–1187. https://doi.org/10.1093/cid/cis670YangCLuoTSunGQiaoKSunGDeRiemerKMeiJGaoQMycobacterium tuberculosis Beijing strains favor transmission but not drug resistance in ChinaClin Infect Dis2012Nov55911791187https://doi.org/10.1093/cid/cis67010.1093/cid/cis670346609522865872Search in Google Scholar
Yang J, Zhang T, Xian X, Li Y, Wang R, Wang P, Zhang M, Wang J. Molecular characteristics and drug resistance of Mycobacterium tuberculosis isolate circulating in Shaanxi Province, Northwestern China. Microb Drug Resist. 2021 Sep;27(9):1207–1217. https://doi.org/10.1089/mdr.2020.0496YangJZhangTXianXLiYWangRWangPZhangMWangJMolecular characteristics and drug resistance of Mycobacterium tuberculosis isolate circulating in Shaanxi Province, Northwestern ChinaMicrob Drug Resist2021Sep27912071217https://doi.org/10.1089/mdr.2020.049610.1089/mdr.2020.049633794134Search in Google Scholar
Yuan L, Huang Y, Mi LG, Li YX, Liu PZ, Zhang J, Liang HY, Li F, Li H, Zhang SQ, et al. There is no correlation between sublineages and drug resistance of Mycobacterium tuberculosis Beijing/ W lineage clinical isolates in Xinjiang, China. Epidemiol Infect. 2015 Jan; 143(1):141–149. https://doi.org/10.1017/S0950268814000582YuanLHuangYMiLGLiYXLiuPZZhangJLiangHYLiFLiHZhangSQet alThere is no correlation between sublineages and drug resistance of Mycobacterium tuberculosis Beijing/ W lineage clinical isolates in Xinjiang, ChinaEpidemiol Infect2015Jan1431141149https://doi.org/10.1017/S095026881400058210.1017/S0950268814000582430119224667051Search in Google Scholar
Zanini F, Carugati M, Schiroli C, Lapadula G, Lombardi A, Code-casa L, Gori A, Franzetti F. Mycobacterium tuberculosis Beijing family: analysis of the epidemiological and clinical factors associated with an emerging lineage in the urban area of Milan. Infect Genet Evol. 2014 Jul;25:14–19. https://doi.org/10.1016/j.meegid.2014.03.021ZaniniFCarugatiMSchiroliCLapadulaGLombardiACode-casaLGoriAFranzettiFMycobacterium tuberculosis Beijing family: analysis of the epidemiological and clinical factors associated with an emerging lineage in the urban area of MilanInfect Genet Evol2014Jul251419https://doi.org/10.1016/j.meegid.2014.03.02110.1016/j.meegid.2014.03.02124694826Search in Google Scholar
Zhou Y, van den Hof S, Wang S, Pang Y, Zhao B, Xia H, Anthony R, Ou X, Li Q, Zheng Y, et al. Association between genotype and drug resistance profiles of Mycobacterium tuberculosis strains circulating in China in a national drug resistance survey. PLoS One. 2017 Mar 23;12(3):e0174197. https://doi.org/10.1371/journal.pone.0174197ZhouYvan denHof SWangSPangYZhaoBXiaHAnthonyROuXLiQZhengYet alAssociation between genotype and drug resistance profiles of Mycobacterium tuberculosis strains circulating in China in a national drug resistance surveyPLoS One2017Mar 23123e0174197https://doi.org/10.1371/journal.pone.017419710.1371/journal.pone.0174197536392628333978Search in Google Scholar
Zong Z, Huo F, Shi J, Jing W, Ma Y, Liang Q, Jiang G, Dai G, Huang H, Pang Y. Relapse versus reinfection of recurrent tuberculosis patients in a national tuberculosis specialized hospital in Beijing, China. Front Microbiol. 2018 Aug 14;9:1858. https://doi.org/10.3389/fmicb.2018.01858ZongZHuoFShiJJingWMaYLiangQJiangGDaiGHuangHPangYRelapse versus reinfection of recurrent tuberculosis patients in a national tuberculosis specialized hospital in Beijing, ChinaFront Microbiol2018Aug 1491858https://doi.org/10.3389/fmicb.2018.0185810.3389/fmicb.2018.01858610232430154770Search in Google Scholar