Antibiotic | 1A/O:5 (roe deer) | 1A/O:8 (roe deer) | 1A/O:5 (red deer) | 1A/O:1.2 (red deer) | 5/O:3 (Alpine ibex) | 1A/N.T. (red fox) | 1A/O:9 (red fox) | 1B/O:5 (beech marten) |
---|---|---|---|---|---|---|---|---|
Ampicillin | R | R | R | R | R | R | R | R |
Amoxicillin/ Clavulanic acid | S | S | S | S | R | S | S | S |
Erythromycin | R | R | R | R | R | R | R | R |
Gentamicin | S | R | S | S | S | S | S | S |
Streptomycin | S | S | S | S | S | S | S | S |
Trimethoprim/ Sulfamethoxazole | S | S | S | S | S | S | S | S |
Enrofloxacin | S | S | S | S | S | S | S | S |
Ciprofloxacin | S | S | S | S | S | S | S | S |
Nalidixic acid | S | S | S | S | S | S | S | S |
Cephalothin | R | R | R | R | R | R | R | S |
Tetracycline | S | S | S | S | S | S | S | S |
Cefotaxime | S | S | S | S | S | R | S | S |
Chloramphenicol | S | S | S | S | S | S | S | S |
Cefuroxime | R | R | R | S | S | R | S | R |
Source | Bio/serotype | MLST | cgMLST | wgMLST |
---|---|---|---|---|
Roe deer | 1A/O:5 | 649 | 4721 | 5608 |
Roe deer | 1A/O:8 | 650 | 4724 | 5610 |
Red deer | 1A/O:5 | 19 | 4994 | 6124 |
Red deer | 1A/O:1.2 | 362 | 4722 | 5609 |
Alpine ibex | 5/O:3 | 13 | 4727 | 5614 |
Red fox | 1A/NT | 12 | 4995 | 6125 |
Red fox | 1A/O:9 | 12 | 4723 | 5606 |
Beech marten | 1B/O:5 | 12 | 4725 | 5611 |
Source | Sex | Age | locations Sampling | Subspecies | Bio/serotype | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Roe deer | female | A | Lillianes | 1A/O:5 | + | + | ||||||||
Roe deer | female | A | Rhêmes Saint Georges | 1A/O:8 | + | + | ||||||||
Red deer | female | A | Saint Rhémy en Bosses | 1A/O:5 | + | + | ||||||||
Red deer | female | S | Saint Rhémy en Bosses | 1A/O:1.2 | + | + | ||||||||
Alpine ibex | female | A | Ayas | 5/O:3 | + | + | + | + | + | + | + | |||
Red fox | male | A | Châtillon | 1A/NT | + | + | + | + | + | |||||
Red fox | female | A | Pré Saint Didier | 1A/O:9 | + | + | + | + | + | |||||
Beech marten | male | Y | Rhêmes Saint Georges | 1B/O:5 | + | + | + | + | + | + | + |