Colistin resistance of non-pathogenic strains of Escherichia coli occurring as natural intestinal flora in broiler chickens treated and not treated with colistin sulphate
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.
Baron S., Hadjadj L., Rolain J.M., Olaitan A.O.: Molecular mechanisms of polymyxin resistance: knowns and unknowns. Int J Antimicrob 2016, 48, 583–591.BaronS.HadjadjL.RolainJ.M.OlaitanA.O.Molecular mechanisms of polymyxin resistance: knowns and unknowns20164858359110.1016/j.ijantimicag.2016.06.023Search in Google Scholar
Carvalho I.T., Santos L.: Antibiotics in the aquatic environments: a review of the European scenario. Environ Int 2016, 94, 736–757.CarvalhoI.T.SantosL.Antibiotics in the aquatic environments: a review of the European scenario20169473675710.1016/j.envint.2016.06.025Search in Google Scholar
Catry B., Cavaleri M., Baptiste K., Grave K., Grein K., Holm A., Jukes H., Liebana E., Lopez Navas A., Mackay D., Magiorakos A.P., Moreno Romo M.A., Moulin G., Muñoz Madero C., Matias Ferreira Pomba M.C., Powell M., Pyörälä S., Rantala M., Ružauskas M., Sanders P., Teale C., Threlfall E.J., Törneke K., van Duijkeren E., Torren Edo J.: Use of colistin-containing products within the European Union and European Economic Area (EU/EEA): development of resistance in animals and possible impact on human and animal health. Int J Antimicrob Agents 2015, 46, 297–306.CatryB.CavaleriM.BaptisteK.GraveK.GreinK.HolmA.JukesH.LiebanaE.LopezNavas A.MackayD.MagiorakosA.P.MorenoRomo M.A.MoulinG.MuñozMadero C.MatiasFerreira Pomba M.C.PowellM.PyöräläS.RantalaM.RužauskasM.SandersP.TealeC.ThrelfallE.J.TörnekeK.van DuijkerenE.Torren EdoJ.Use of colistin-containing products within the European Union and European Economic Area (EU/EEA): development of resistance in animals and possible impact on human and animal health20154629730610.1016/j.ijantimicag.2015.06.005Search in Google Scholar
Dheilly A., Le Devendec L., Mourand G., Bouder A., Jouy E., Kempf I.: Resistance gene transfer during treatments for experimental avian colibacillosis. Antimicrob Agents Chemother 2012, 56, 189–196.DheillyA.Le DevendecL.MourandG.BouderA.JouyE.KempfI.Resistance gene transfer during treatments for experimental avian colibacillosis20125618919610.1128/AAC.05617-11Search in Google Scholar
Elbediwi M., Li Y., Paudyal N., Pan H., Li X., Xie S., Rajkovic A., Feng Y., Fang W., Rankin S.C., Yue M.: Global Burden of Colistin-Resistant Bacteria: Mobilized Colistin Resistance Genes Study (1980–2018). Microorganisms 2019, 7, 461.ElbediwiM.LiY.PaudyalN.PanH.LiX.XieS.RajkovicA.FengY.FangW.RankinS.C.YueM.Global Burden of Colistin-Resistant Bacteria: Mobilized Colistin Resistance Genes Study (1980–2018)2019746110.3390/microorganisms7100461Search in Google Scholar
Eng S.K., Pusparajah P., Ab Mutalib N.S., Ser H.L., Chan K.G., Lee L.H.: Salmonella a review on pathogenesis, epidemiology, and antibiotic resistance. Front Life Sci 2015, 8, 284–293.EngS.K.PusparajahP.AbMutalib N.S.SerH.L.ChanK.G.LeeL.H.Salmonella a review on pathogenesis, epidemiology, and antibiotic resistance2015828429310.1080/21553769.2015.1051243Search in Google Scholar
European Council Regulation (EC) No 1099/2009 of 24 September 2009 on the protection of animals at the time of killing. OJ L303, 18/11/2009.OJ L303, 18/11/2009Search in Google Scholar
European Medicines Agency: European Surveillance of Veterinary Antimicrobial Consumption, 2018. Sales of veterinary antimicrobial agents in 30 European countries in 2016, Eighth ESVAC Report, EMA/275982/2018. European Medicines Agency, London, 2018, pp 180. https://www.ema.europa.eu/en/documents/report/sales-veterinary-antimicrobial-agents-30-european-countries-2016-trends-2010-2016-eighth-esvac_en.pdfEuropean Medicines AgencyLondon2018pp180https://www.ema.europa.eu/en/documents/report/sales-veterinary-antimicrobial-agents-30-european-countries-2016-trends-2010-2016-eighth-esvac_en.pdfSearch in Google Scholar
Gröndahl-Yli-Hannuksela K., Lönnqvist E., Kallonen T., Lindholm L., Jalava J., Rantakokko-Jalava K., Vuopio J.: The first human report of mobile colistin resistance gene, mcr-1, in Finland. APMIS 2018, 126, 413–417.Gröndahl-Yli-HannukselaK.LönnqvistE.KallonenT.LindholmL.JalavaJ.Rantakokko-JalavaK.VuopioJ.The first human report of mobile colistin resistance gene, mcr-1, in Finland201812641341710.1111/apm.12834Search in Google Scholar
Haenni M., Poirel L., Kieffer N., Châtre P., Saras E., Métayer V., Dumoulin R., Nordmann P., Madec J.Y.: Co-occurrence of extended spectrum β-lactamase and MCR-1 encoding genes on plasmids. Lancet Infect Dis 2016, 16, 281–282.HaenniM.PoirelL.KiefferN.ChâtreP.SarasE.MétayerV.DumoulinR.NordmannP.MadecJ.Y.Co-occurrence of extended spectrum β-lactamase and MCR-1 encoding genes on plasmids20161628128210.1016/S1473-3099(16)00007-4Search in Google Scholar
Kaakoush N.O., Castaño-Rodríguez N., Mitchell H.M., Man S.M.: Global epidemiology of Campylobacter infection. Clin Microbiol Rev 2015, 28, 687–720.KaakoushN.O.Castaño-RodríguezN.MitchellH.M.ManS.M.Global epidemiology of Campylobacter infection20152868772010.1128/CMR.00006-15446268026062576Search in Google Scholar
Kempf I., Jouy E., Chauvin C.: Colistin use and colistin resistance in bacteria from animals. Int J Antimicrob 2016, 48, 598–606.KempfI.JouyE.ChauvinC.Colistin use and colistin resistance in bacteria from animals20164859860610.1016/j.ijantimicag.2016.09.01627836380Search in Google Scholar
Liu Y.Y., Wang Y., Walsh T.R., Yi L.X., Zhang R., Spencer J., Doi Y., Tian G., Dong B., Huang X., Yu L.F., Gu D., Ren H., Chen X., Lv L., He D., Zhou H., Liang Z., Liu J.H., Shen J.: Emergence of plasmid-mediated colistin resistance mechanism MCR-1 in animals and human beings in China: a microbiological and molecular biological study. Lancet Infect Dis 2016, 16, 161–168.LiuY.Y.WangY.WalshT.R.YiL.X.ZhangR.SpencerJ.DoiY.TianG.DongB.HuangX.YuL.F.GuD.RenH.ChenX.LvL.HeD.ZhouH.LiangZ.LiuJ.H.ShenJ.Emergence of plasmid-mediated colistin resistance mechanism MCR-1 in animals and human beings in China: a microbiological and molecular biological study20161616116810.1016/S1473-3099(15)00424-7Search in Google Scholar
Majewski M., Józefiak A., Kimsa-Furdzik M., Dziubdziela L., Hudak-Nowak M., Wilczyński J., Anusz K.: Antimicrobial resistance of Escherichia coli and Klebsiella spp. conventionally sampled from factory-farmed chickens – clinical submissions. Ann Agric Environ Med 2020, doi: 10.26444/aaem/120927.MajewskiM.JózefiakA.Kimsa-FurdzikM.DziubdzielaL.Hudak-NowakM.WilczyńskiJ.AnuszK.Antimicrobial resistance of Escherichia coli and Klebsiella spp. conventionally sampled from factory-farmed chickens – clinical submissions202010.26444/aaem/120927Open DOISearch in Google Scholar
Matamoros S., van Hattem J.M., Arcilla M.S., Willemse N., Melles D.C., Penders J., Vinh T.N., Hoa N.T., Bootsma M.C.J, van Genderen P.J., Goorhuis A., Grobusch M., Molhoek N., OudeLashof A.M.L., Stobberingh E.E., Verbrugh H.A., de Jong M.D., Schultsz C.: Global phylogenetic analysis of Escherichia coli and plasmids carrying the mcr-1 gene indicates bacterial diversity but plasmid restriction. Sci Rep 2017, 7, 15364, 1–10.MatamorosS.van HattemJ.M.ArcillaM.S.WillemseN.MellesD.C.PendersJ.VinhT.N.HoaN.T.BootsmaM.C.Jvan GenderenP.J.GoorhuisA.GrobuschM.MolhoekN.OudeLashofA.M.L.StobberinghE.E.VerbrughH.A.de JongM.D.SchultszC.Global phylogenetic analysis of Escherichia coli and plasmids carrying the mcr-1 gene indicates bacterial diversity but plasmid restriction201771536411010.1038/s41598-017-15539-7Search in Google Scholar
Mathers A.J., Peirano G., Pitout J.D.: The role of epidemic resistance plasmids and international high-risk clones in the spread of multidrug-resistant Enterobacteriaceae. Clin Microbiol Rev 2015, 28, 565–591.MathersA.J.PeiranoG.PitoutJ.D.The role of epidemic resistance plasmids and international high-risk clones in the spread of multidrug-resistant Enterobacteriaceae20152856559110.1128/CMR.00116-14Search in Google Scholar
Monte D.F., Mem A., Fernandes M.R., Cerdeira L., Esposito F., Galvão J.A., Franco B.D.G.M., Lincopan N., Landgraf M.: Chicken meat as a reservoir of colistin-resistant Escherichia coli strains carrying mcr-1 genes in South America. Antimicrob Agents Chemother 2017, 61, e02718-16, doi: 10.1128/AAC.02718-16.MonteD.F.MemA.FernandesM.R.CerdeiraL.EspositoF.GalvãoJ.A.FrancoB.D.G.M.LincopanN.LandgrafM.Chicken meat as a reservoir of colistin-resistant Escherichia coli strains carrying mcr-1 genes in South America201761e027181610.1128/AAC.02718-16Open DOISearch in Google Scholar
Nguyen N.T., Nguyen H.M., Nguyen C.V., Nguyen T.V., Nguyen M.T., Thai H.Q., Ho M.H., Thwaites G., Ngo H.T., Baker S., Carrique-Mas J.: Use of colistin and other critical antimicrobials on pig and chicken farms in southern Vietnam and its association with resistance in commensal Escherichia coli bacteria. Appl Environ Microbiol 2016, 82, 3727–3735.NguyenN.T.NguyenH.M.NguyenC.V.NguyenT.V.NguyenM.T.ThaiH.Q.HoM.H.ThwaitesG.NgoH.T.BakerS.Carrique-MasJ.Use of colistin and other critical antimicrobials on pig and chicken farms in southern Vietnam and its association with resistance in commensal Escherichia coli bacteria2016823727373510.1128/AEM.00337-16Search in Google Scholar
Poirel L., Kieffer N., Liassine N., Thanh D., Nordmann P.: Plasmid-mediated carbapenem and colistin resistance in a clinical isolate of Escherichia coli. Lancet Infect Dis 2016, 16, 281, doi: 10.1016/S1473-3099(16)00006-2.PoirelL.KiefferN.LiassineN.ThanhD.NordmannP.Plasmid-mediated carbapenem and colistin resistance in a clinical isolate of Escherichia coli20161628110.1016/S1473-3099(16)00006-2Open DOISearch in Google Scholar
Rahmatallah N., Rhaffouli H., Amine I.L., Sekhsokh Y., Fihri O.F., Houadfi M.: Consumption of antibacterial molecules in broiler production in Morocco. Vet Med Sci 2018, 4, 80–90.RahmatallahN.RhaffouliH.AmineI.L.SekhsokhY.FihriO.F.HouadfiM.Consumption of antibacterial molecules in broiler production in Morocco20184809010.1002/vms3.89597961829851315Search in Google Scholar
R Core Team: R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, 2019. https://www.R-project.org/R Foundation for Statistical ComputingVienna2019https://www.R-project.org/Search in Google Scholar
Ronquillo M.G., Hernandez J.C.A.: Antibiotic and synthetic growth promoters in animal diets: review of impact and analytical methods. Food Control 2017, 72, 255–267.RonquilloM.G.HernandezJ.C.A.Antibiotic and synthetic growth promoters in animal diets: review of impact and analytical methods20177225526710.1016/j.foodcont.2016.03.001Search in Google Scholar
Rouger A., Tresse O., Zagorec M.: Bacterial contaminants of poultry meat: sources, species, and dynamics. Microorganisms 2017, 5, 50, doi: 10.3390/microorganisms5030050.RougerA.TresseO.ZagorecM.Bacterial contaminants of poultry meat: sources, species, and dynamics201755010.3390/microorganisms5030050562064128841156Open DOISearch in Google Scholar
Walsh T.R., Wu Y.: China bans colistin as a feed additive for animals. Lancet Infect Dis 2016, 16, 1102–1103.WalshT.R.WuY.China bans colistin as a feed additive for animals2016161102110310.1016/S1473-3099(16)30329-2Search in Google Scholar
Wang R., van Dorp L., Shaw L.P., Bradley P., Wang Q., Wang X., Jin L., Zhang Q., Liu Y., Rieux A., Dorai-Schneiders T., Weinert L.A., Iqbal Z., Didelot X., Wang H., Balloux F.: The global distribution and spread of the mobilized colistin resistance gene mcr-1. Nat Commun 2018, 9, 1179, doi: 10.1038/s41467-018-03205-z.WangR.van DorpL.ShawL.P.BradleyP.WangQ.WangX.JinL.ZhangQ.LiuY.RieuxA.Dorai-SchneidersT.WeinertL.A.IqbalZ.DidelotX.WangH.BallouxF.The global distribution and spread of the mobilized colistin resistance gene mcr-120189117910.1038/s41467-018-03205-zOpen DOISearch in Google Scholar
World Health Organisation: Critically important antimicrobials for human medicine – 5th revision. World Health Organization, Geneva, 2017. https://www.who.int/foodsafety/publications/antimicrobials-fifth/en/World Health OrganizationGeneva2017https://www.who.int/foodsafety/publications/antimicrobials-fifth/en/Search in Google Scholar
Yao X., Doi Y., Zeng L., Lv L., Liu J.H.: Carbapenem-resistant and colistin-resistant Escherichia coli co-producing NDM-9 and MCR-1. Lancet Infect Dis 2016, 16, 288–289.YaoX.DoiY.ZengL.LvL.LiuJ.H.Carbapenem-resistant and colistin-resistant Escherichia coli co-producing NDM-9 and MCR-120161628828910.1016/S1473-3099(16)00057-8Search in Google Scholar
Yassin A.K., Zhang J., Wang J., Chen L., Kelly P., Butaye P., Lu G., Gong J., Li M., Wie L., Wang Y., Qi K., Han X., Price S., Hathcock T., Wang C.: Identification and characterization of mcr mediated colistin resistance in extraintestinal Escherichia coli from poultry and livestock in China. FEMS Microbiol Lett 2017, 364, 1–6, doi: 10.1093/femsle/fnx242.YassinA.K.ZhangJ.WangJ.ChenL.KellyP.ButayeP.LuG.GongJ.LiM.WieL.WangY.QiK.HanX.PriceS.HathcockT.WangC.Identification and characterization of mcr mediated colistin resistance in extraintestinal Escherichia coli from poultry and livestock in China20173641610.1093/femsle/fnx24229126221Open DOISearch in Google Scholar
Zurfuh K., Poirel L., Nordmann P., Nüesch-Inderbinen M., Hächler H., Stephana R.: Occurrence of the plasmid-borne mcr-1 colistin resistance gene in extended-spectrum β-lactamase-producing Enterobacteriaceae in river water and imported vegetable samples in Switzerland. Antimicrob Agents Chemother 2016, 60, 2594–2595.ZurfuhK.PoirelL.NordmannP.Nüesch-InderbinenM.HächlerH.StephanaR.Occurrence of the plasmid-borne mcr-1 colistin resistance gene in extended-spectrum β-lactamase-producing Enterobacteriaceae in river water and imported vegetable samples in Switzerland2016602594259510.1128/AAC.00066-16480820326883696Search in Google Scholar