New insights into the genetic variability of Fasciola hepatica (Trematoda) in Algeria and relationships with other geographic regions revealed by mitochondrial DNA

Ai, L., Weng, Y.B., Elsheikha, H.M., Zhao, G.H., Alasaad, S., Chen, J.X., Li, J., Li, H.L., Wang, C.R., Chen, M.X., Lin, R.Q., Zhu, X.Q. (2011): Genetic diversity and relatedness of Fasciola spp. isolates from different hosts and geographic regions revealed by analysis of mitochondrial DNA sequences. Vet Parasitol, 181: 329–334. DOI: 10.1016/j.vetpar.2011.03.057 Ai L. Weng Y.B. Elsheikha H.M. Zhao G.H. Alasaad S. Chen J.X. Li J. Li H.L. Wang C.R. Chen M.X. Lin R.Q. Zhu X.Q. 2011 Genetic diversity and relatedness of Fasciola spp isolates from different hosts and geographic regions revealed by analysis of mitochondrial DNA sequences. Vet Parasitol 181 329 334 10.1016/j.vetpar.2011.03.05721524854Open DOISearch in Google Scholar

Aissi, M., Harhoura, K.H., Gaid, S., Hamrioui, B. (2009): Étude préliminaire sur la prévalence de la fasciolose due à Fasciola hepatica dans quelques élevages bovins du nord centre algérien (la Mitidja). [Preliminary study on the prevalence of fasciolosis due to Fasciola hepatica in some cattle farms in northern central Algeria (Mitidja).] Bull Soc Pathol Exot, 102: 177–178 Aissi M. Harhoura K.H. Gaid S. Hamrioui B. 2009 Étude préliminaire sur la prévalence de la fasciolose due à Fasciola hepatica dans quelques élevages bovins du nord centre algérien (la Mitidja) [Preliminary study on the prevalence of fasciolosis due to Fasciola hepatica in some cattle farms in northern central Algeria (Mitidja).] Bull Soc Pathol Exot 102 177 178Search in Google Scholar

Alasaad, S., Huang, C.Q., Li, Q.Y., Granados, J.E., Garcia-Romero, C., Perez, J.M., Zhu, X.Q. (2007): Characterization of Fasciola samples from different host species and geographical localities in Spain by sequences of internal transcribed spacers of rDNA. Parasitol Res, 101: 1245–1250. DOI: 10.1007/s00436-007-0628-2 Alasaad S. Huang C.Q. Li Q.Y. Granados J.E. Garcia-Romero C. Perez J.M. Zhu X.Q. 2007 Characterization of Fasciola samples from different host species and geographical localities in Spain by sequences of internal transcribed spacers of rDNA Parasitol Res 101 1245 1250 10.1007/s00436-007-0628-217610081Open DOISearch in Google Scholar

Amer, S., Elkhatam, A., Zidan, S., Feng, Y., Xiao, L. (2016): Identity of Fasciola spp. in sheep in Egypt. Parasit Vectors, 9: 623. DOI: 10.1186/s13071-016-1898-2 Amer S. Elkhatam A. Zidan S. Feng Y. Xiao L. 2016 Identity of Fasciola spp in sheep in Egypt. Parasit Vectors 9 623 10.1186/s13071-016-1898-2513422727906040Open DOISearch in Google Scholar

Amor, N., Farjallah, S., Merella, P., Alagaili, A. N., Mohammed, O.B. (2020): Multilocus approach reveals discordant molecular markers and corridors for gene flow between North African populations of Fasciola hepatica Vet Parasitol, 278: 109035. DOI: 10.1016/j.vet-par.2020.109035 Amor N. Farjallah S. Merella P. Alagaili A. N. Mohammed O.B. 2020 Multilocus approach reveals discordant molecular markers and corridors for gene flow between North African populations of Fasciola hepatica Vet Parasitol 278 109035 10.1016/j.vet-par.2020.109035Open DOISearch in Google Scholar

Amor, N., Halajian, A., Farjallah, S., Merella, P., Said, K., Slimane, B.B. (2011): Molecular characterization of Fasciola spp. from the endemic area of northern Iran based on nuclear ribosomal DNA sequences. Exp Para, 128: 196–204. DOI: 10.1016/j.exppara.2011.03.011 Amor N. Halajian A. Farjallah S. Merella P. Said K. Slimane B.B. 2011 Molecular characterization of Fasciola spp from the endemic area of northern Iran based on nuclear ribosomal DNA sequences. Exp Para 128 196 204 10.1016/j.exppara.2011.03.01121440546Open DOISearch in Google Scholar

Ashrafi, K., Valero, M.A., Panova, M., Periago, M.V., Massoud, J., Mas-Coma, S. (2006): Phenotypic analysis of adults of Fasciola hepatica Fasciola gigantica and intermediate forms from the endemic region of Gilan. Iran Parasitol Int, 55: 249–260. DOI: 10.1016/j. parint.2006.06.003 Ashrafi K. Valero M.A. Panova M. Periago M.V. Massoud J. Mas-Coma S. 2006 Phenotypic analysis of adults of Fasciola hepatica Fasciola gigantica and intermediate forms from the endemic region of Gilan Iran Parasitol Int 55 249 260 10.1016/j.parint.2006.06.00316901748Open DOISearch in Google Scholar

Bandelt, H.J., Forster, P., Rohl, A. (1999): Median-joining networks for inferring intraspecific phylogenies. Mol Biol Evol, 16: 37–48. DOI: 10.1093/oxfordjournals.molbev.a026036 Bandelt H.J. Forster P. Rohl A. 1999 Median-joining networks for inferring intraspecific phylogenies Mol Biol Evol 16 37 48 10.1093/oxfordjournals.molbev.a02603610331250Open DOISearch in Google Scholar

Beesley, N.J., Williams, D.J., Paterson, S., Hodgkinson, J. (2017): Fasciola hepatica demonstrates high levels of genetic diversity, a lack of population structure and high gene flow: possible implications for drug resistance. Int. J. Parasitol., 47(1): 11–20. DOI: 10.1016/j.ijpara.2016.09.007 Beesley N.J. Williams D.J. Paterson S. Hodgkinson J. 2017 Fasciola hepatica demonstrates high levels of genetic diversity, a lack of population structure and high gene flow: possible implications for drug resistance Int. J. Parasitol 47 1 11 20 10.1016/j.ijpara.2016.09.007526442827940066Open DOISearch in Google Scholar

Birky, C.W. (2013): Species detection and identification in sexual organisms using population genetic theory and DNA sequences. PLoS One, 8: e52544. DOI: 10.1371/journal.pone.0052544 Birky C.W. 2013 Species detection and identification in sexual organisms using population genetic theory and DNA sequences PLoS One 8 e52544 10.1371/journal.pone.0052544353772223308113Open DOISearch in Google Scholar

Birky, C.W., Adams, J., Gemmel, M., Perry , J. (2010): Using population genetic theory and DNA sequences for species detection and identification in asexual organisms. PLoS One, 5: e10609. DOI: 10.1371/journal.pone.0010609 Birky C.W. Adams J. Gemmel M. Perry J. 2010 Using population genetic theory and DNA sequences for species detection and identification in asexual organisms PLoS One 5 e10609 10.1371/journal.pone.0010609286935420498705Open DOISearch in Google Scholar

Bozorgomid, A., Rouhani, S., Harandi, M.f., Ichikawa-Seki, M., Raeghi, S. (2019): Genetic diversity and distribution of Fasciola hepatica haplotypes in Iran: Molecular and phylogenetic studies. Vet Parasitol Reg Stud Reports, 19: 100359. DOI: 10.1016/j. vprsr.2019.100359 Bozorgomid A. Rouhani S. Harandi M.f. Ichikawa-Seki M. Raeghi S. 2019 Genetic diversity and distribution of Fasciola hepatica haplotypes in Iran: Molecular and phylogenetic studies Vet Parasitol Reg Stud Reports 19 100359 10.1016/j.vprsr.2019.10035932057386Open DOISearch in Google Scholar

Chaouadi, M., Harhoura, K., Aissi, M., Zait, H., Zenia, S., Tazerouti, F. (2019): A post-mortem study of bovine fasciolosis in the Mitidja (north center of Algeria): Prevalence, risk factors, and comparison of diagnostic methods. Trop Anim Health Prod, 51: 2315–2321. DOI: 10.1007/s11250-019-01951-w Chaouadi M. Harhoura K. Aissi M. Zait H. Zenia S. Tazerouti F. 2019 A post-mortem study of bovine fasciolosis in the Mitidja (north center of Algeria): Prevalence, risk factors, and comparison of diagnostic methods Trop Anim Health Prod 51 2315 2321 10.1007/s11250-019-01951-w31165434Open DOISearch in Google Scholar

Chougar, L., Mas-Coma, S., Artigas, P., Harhoura, K., Aissi, M., Agramunt, V.H., Bargues, M.D. (2020): Genetically “pure” Fasciola gigantica discovered in Algeria: DNA multimarker characterization, trans-Saharan introduction from a Sahel origin and spreading risk into northwestern Maghreb countries. Transbound Emerg Dis, 67: 2190–2205. DOI: 10.1111/tbed.13572 Chougar L. Mas-Coma S. Artigas P. Harhoura K. Aissi M. Agramunt V.H. Bargues M.D. 2020 Genetically “pure” Fasciola gigantica discovered in Algeria: DNA multimarker characterization, trans-Saharan introduction from a Sahel origin and spreading risk into northwestern Maghreb countries Transbound Emerg Dis 67 2190 2205 10.1111/tbed.1357232304266Open DOISearch in Google Scholar

Chougar, L., Amor, N., Farjallah, S., Harhoura, K., Aissi, M., Alagaili, A.N., Merella, P. (2019): New insight into genetic variation and haplotype diversity of Fasciola hepatica from Algeria. Parasitol Res, 118: 1179–1192. DOI: 10.1007/s00436-019-06270-5 Chougar L. Amor N. Farjallah S. Harhoura K. Aissi M. Alagaili A.N. Merella P. 2019 New insight into genetic variation and haplotype diversity of Fasciola hepatica from Algeria Parasitol Res 118 1179 1192 10.1007/s00436-019-06270-530847611Open DOISearch in Google Scholar

Cossu, P., Dedola, G.L., Scarpa , F., Sanna, D., Lai, T., Maltagliati, F., Curini-Galletti, M., Casu, M. (2015): Patterns of spatial genetic variation in Patella ulyssiponensis: Insights from the western Mediterranean marine ecoregion. Hydrobiologia, 755: 39–55. DOI: 10.1007/s10750-015-2216-2 Cossu P. Dedola G.L. Scarpa F. Sanna D. Lai T. Maltagliati F. Curini-Galletti M. Casu M. 2015 Patterns of spatial genetic variation in Patella ulyssiponensis: Insights from the western Mediterranean marine ecoregion Hydrobiologia 755 39 55 10.1007/s10750-015-2216-2Open DOISearch in Google Scholar

Cwiklinski, K., Dalton, J.P., Dufresne, P.J., La Course, J., Williams, D.Jl., Hodgkinson, J., Paterson, S. (2015): The Fasciola hepatica genome: gene duplication and polymorphism reveals adaptation to the host environment and the capacity for rapid evolution. Genome Biol, 16: 71. DOI: 10.1186/s13059-015-0632-2 Cwiklinski K. Dalton J.P. Dufresne P.J. La Course J. Williams D.Jl. Hodgkinson J. Paterson S. 2015 The Fasciola hepatica genome: gene duplication and polymorphism reveals adaptation to the host environment and the capacity for rapid evolution Genome Biol 16 71 10.1186/s13059-015-0632-2440456625887684Open DOISearch in Google Scholar

Cwiklinski, K., Allen, K., Lacourse, J., Williams, D.J., Paterson, S., Hodgkinson, J.E. (2015): Characterization of a novel panel of polymorphic microsatellite loci for the liver fluke, Fasciola hepatica, using a next generation sequencing approach. Infect Genet Evol, 32: 298–304. DOI: 10.1186/s13059-015-0632-2 Cwiklinski K. Allen K. Lacourse J. Williams D.J. Paterson S. Hodgkinson J.E. 2015 Characterization of a novel panel of polymorphic microsatellite loci for the liver fluke, Fasciola hepatica, using a next generation sequencing approach Infect Genet Evol 32 298 304 10.1186/s13059-015-0632-2Open DOISearch in Google Scholar

Drummond, A.J., Rambaut, A. (2007): BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol, 7: e214. DOI: 10.1186/1471-2148-7-214 Drummond A.J. Rambaut A. 2007 BEAST: Bayesian evolutionary analysis by sampling trees BMC Evol Biol 7 e214 10.1186/1471-2148-7-214224747617996036Open DOISearch in Google Scholar

Elliott, T., Muller, A., Brockwell, Y., Murphy, N., Grillo, V., Toet, H.M., Andersone, G., Sangster, N., Spithill, T.W. (2014): Evidence for high genetic diversity of NAD1 and COX1 mitochondrial haplotypes among triclabendazole resistant and susceptible populations and field isolates of Fasciola hepatica (liver fluke) in Australia. Vet Parasitol, 200: 90–96. DOI: 10.1016/j.vetpar.2013.11.019 Ezard, T., Fujisawa, T., Barraclough, T.G. (2009): SPLITS: SPecies’ LImits by Threshold Statistics. R package version 1.0-11, Available at http://R-Forge.R-project.org/projects/splits. Elliott T. Muller A. Brockwell Y. Murphy N. Grillo V. Toet H.M. Andersone G. Sangster N. Spithill T.W. 2014 Evidence for high genetic diversity of NAD1 and COX1 mitochondrial haplotypes among triclabendazole resistant and susceptible populations and field isolates of Fasciola hepatica (liver fluke) in Australia Vet Parasitol 200 90 96 10.1016/j.vetpar.2013.11.019 Ezard, T., Fujisawa, T., Barraclough, T.G. (2009): SPLITS: SPecies’ LImits by Threshold Statistics. R package version 1.0-11, Available at http://R-Forge.R-project.org/projects/splits.24360656Open DOISearch in Google Scholar

Farjallah, S., Sanna, D., Amor, N., Ben Mehel, B., Piras, M.C., Merella, P., Casu, M., Curini-Galletti, M., Said, K., Garippa , G. (2009): Genetic characterization of Fasciola hepatica from Tunisia and Algeria based on mitochondrial and nuclear DNA sequences. Parasitol Res, 105: 1617–1621. DOI: 10.1007/s00436-009-1601-z Farjallah S. Sanna D. Amor N. Ben Mehel B. Piras M.C. Merella P. Casu M. Curini-Galletti M. Said K. Garippa G. 2009 Genetic characterization of Fasciola hepatica from Tunisia and Algeria based on mitochondrial and nuclear DNA sequences Parasitol Res 105 1617 1621 10.1007/s00436-009-1601-z19727821Open DOISearch in Google Scholar

Farjallah, S., Slimane, B., Piras, C.M., Amor, N., Garippa , G., Merella, P. (2013): Molecular characterization of Fasciola hepatica from Sardinia based on sequence analysis of genomic and mitochondrial gene markers. Exp Parasitol, 135: 471–478. DOI: 10.1016/j.exppara.2013.08.006 Farjallah S. Slimane B. Piras C.M. Amor N. Garippa G. Merella P. 2013 Molecular characterization of Fasciola hepatica from Sardinia based on sequence analysis of genomic and mitochondrial gene markers Exp Parasitol 135 471 478 10.1016/j.exppara.2013.08.00623994483Open DOISearch in Google Scholar

Fu, Y.X. (1997): Statistical tests of neutrality of mutations against population growth, hitchhiking and backgroud selection. Genetics, 147: 915–925. DOI: 10.1093/genetics/147.2.915 Fu Y.X. 1997 Statistical tests of neutrality of mutations against population growth, hitchhiking and backgroud selection Genetics 147 915 925 10.1093/genetics/147.2.91512082089335623Open DOISearch in Google Scholar

Gelman, A., Rubin, D.B. (1992): Inference from iterative simulation using multiple sequences. Stat Sci, 7: 457–472. DOI: 10.1214/ss/1177011136 Gelman A. Rubin D.B. 1992 Inference from iterative simulation using multiple sequences Stat Sci 7 457 472 10.1214/ss/1177011136Open DOISearch in Google Scholar

Hewitt, G. (2000): The genetic legacy of the Quarternary ice ages. Nature, 405: 907–913. DOI: 10.1038/35016000 Hewitt G. 2000 The genetic legacy of the Quarternary ice ages Nature 405 907 913 10.1038/3501600010879524Open DOISearch in Google Scholar

Itagaki, T., Kikawa, M., Sakaguchi, K., Shimo, J., Terasaki, K., Shibahara, T., Fukuda, K. (2005): Genetic characterization of parthenogenic Fasciola sp. in Japan on the basis of the sequences of ribosomal and mitochondrial DNA. Parasitol, 131: 679–685. DOI: 10.1017/S0031182005008292 Itagaki T. Kikawa M. Sakaguchi K. Shimo J. Terasaki K. Shibahara T. Fukuda K. 2005 Genetic characterization of parthenogenic Fasciola sp in Japan on the basis of the sequences of ribosomal and mitochondrial DNA. Parasitol 131 679 685 10.1017/S003118200500829216255826Open DOISearch in Google Scholar

Itagaki, T., Sakaguchi, K., Terasaki, K., Sasaki, O., Yoshihara, S., Van Dung, T. (2009): Occurrence of spermic diploid and aspermic triploid forms of Fasciola in Vietnam and their molecular characterization based on nuclear and mitochondrial DNA. Parasitol Int, 58: 81–85. DOI: 10.1016/j.parint.2008.11.003 Itagaki T. Sakaguchi K. Terasaki K. Sasaki O. Yoshihara S. Van Dung T. 2009 Occurrence of spermic diploid and aspermic triploid forms of Fasciola in Vietnam and their molecular characterization based on nuclear and mitochondrial DNA Parasitol Int 58 81 85 10.1016/j.parint.2008.11.00319087891Open DOISearch in Google Scholar

Kimura, M. (1980): A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol, 16: 111–120. DOI: 10.1007/BF01731581 Kimura M. 1980 A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences J Mol Evol 16 111 120 10.1007/BF017315817463489Open DOISearch in Google Scholar

Latamna, A.E., Tashiro, M., Zokbi, Z., Chibout, Y., Megrane, S., Mebarka, F., Ichikawa-Seki, M. (2021): Molecular characterization and phylogenetic analysis of Fasciola hepatica from high-plateau and steppe areas in Algeria. Parasitol Int, 80: 102234. DOI: 10.1016/j. parint.2020.102234 Latamna A.E. Tashiro M. Zokbi Z. Chibout Y. Megrane S. Mebarka F. Ichikawa-Seki M. 2021 Molecular characterization and phylogenetic analysis of Fasciola hepatica from high-plateau and steppe areas in Algeria Parasitol Int 80 102234 10.1016/j.parint.2020.10223433144198Open DOISearch in Google Scholar

Le, T., De, N., Agatsuma, T., Thi, Nguyen, T., Nguyen, Q., Mcmanus, D., Blair, D. (2008): Human fascioliasis and the presence of hybrid/introgressed forms of Fasciola hepatica and Fasciola gigantica in Vietnam. Int J Parasitol, 38: 725–730. DOI: 10.1016/j. ijpara.2007.10.003 Le T. De N. Agatsuma T. Thi Nguyen, T. Nguyen Q. Mcmanus D. Blair D. 2008 Human fascioliasis and the presence of hybrid/introgressed forms of Fasciola hepatica and Fasciola gigantica in Vietnam Int J Parasitol 38 725 730 10.1016/j.ijpara.2007.10.00318031748Open DOISearch in Google Scholar

Le, T.H., Blair, D., Agatsuma, T., Humair, P.F., Campbel, N.J., Iwagami, M., Littlewood, D.T., Peacock, B., Johnston, D.A., Bartley, J., Rolinson, D., Herniou, E.A., Zarlenga, D.S., Mcmanus, D.P. (2000): Phylogenies inferred from mitochondrial gene orders-a cautionary tale from the parasitic flatworms. Mol Biol Evol, 17: 1123–1125. DOI: 10.1093/oxfordjournals.molbev.a026393 Le T.H. Blair D. Agatsuma T. Humair P.F. Campbel N.J. Iwagami M. Littlewood D.T. Peacock B. Johnston D.A. Bartley J. Rolinson D. Herniou E.A. Zarlenga D.S. Mcmanus D.P. 2000 Phylogenies inferred from mitochondrial gene orders-a cautionary tale from the parasitic flatworms Mol Biol Evol 17 1123 1125 10.1093/oxfordjournals.molbev.a02639310889225Open DOISearch in Google Scholar

Librado, P., Rozas, J. (2009): DnaSP v5: A software for comprehensive analysis of DNA polymorphism data. Bioinformatics, 25, 1451–1452. DOI: 10.1093/bioinformatics/btp187 Librado P. Rozas J. 2009 DnaSP v5: A software for comprehensive analysis of DNA polymorphism data Bioinformatics 25 1451–1452 10.1093/bioinformatics/btp18719346325Open DOISearch in Google Scholar

Lotfy, W.M., Brant, S.V., Dejong, R.J., Le, T.H., Demiaszkiewicz, A., Rajapa kse, R.P., Perera, V.B., Laursen, J.R., Loker, E.S. (2008): Evolutionary origins, diversification, and biogeography of Liver Flukes. Am J Trop Med Hyg, 79: 248–255. DOI: 10.4269/ajtmh.2008.79.248 Lotfy W.M. Brant S.V. Dejong R.J. Le T.H. Demiaszkiewicz A. Rajapa kse R.P. Perera V.B. Laursen J.R. Loker E.S. 2008 Evolutionary origins, diversification, and biogeography of Liver Flukes Am J Trop Med Hyg 79 248 255 10.4269/ajtmh.2008.79.248Open DOISearch in Google Scholar

Luton, K., Walker, D., Blair, D. (1992): Comparisons of ribosomal internal transcribed spacers from two congeneric species of flukes (Platyhelminthes: Trematoda: Digenea). Mol Biochem Parasitol, 56: 323–327. DOI: 10.1016/0166-6851(92)90181-I Luton K. Walker D. Blair D. 1992 Comparisons of ribosomal internal transcribed spacers from two congeneric species of flukes (Platyhelminthes: Trematoda: Digenea) Mol Biochem Parasitol 56 323 327 10.1016/0166-6851(92)90181-I1484553Open DOISearch in Google Scholar

Martinez-Valadares, M., Rojo-Vazquez, F.A. (2014): Intraspecific mitochondrial DNA variation of Fasciola hepatica eggs from sheep with different level of anthelmintic resistance. Parasitol Res, 113: 2733–2741. DOI: 10.1007/s00436-014-3934-5 Martinez-Valadares M. Rojo-Vazquez F.A. 2014 Intraspecific mitochondrial DNA variation of Fasciola hepatica eggs from sheep with different level of anthelmintic resistance Parasitol Res 113 2733 2741 10.1007/s00436-014-3934-524832814Open DOISearch in Google Scholar

Mas-Coma, S., Bargues, M.D., Valero, M.A. (2005): Fascioliasis and other plant-borne trematode zoonoses. Int J Parasitol, 35: 1255–1278. DOI: 10.1016/j.ijpara.2005.07.010 Mas-Coma S. Bargues M.D. Valero M.A. 2005 Fascioliasis and other plant-borne trematode zoonoses Int J Parasitol 35 1255 1278 10.1016/j.ijpara.2005.07.01016150452Open DOISearch in Google Scholar

Mas-Coma, S., Valero, M.A., Bargues, M.D. (2009): Fasciola, lymnaeids and human fascioliasis, with a global overview on disease transmission, epidemiology, evolutionary genetics, molecular epidemiology and control. Adv Parasitol, 69: 41–146. DOI: 10.1016/S0065-308X(09)69002-3 Mas-Coma S. Valero M.A. Bargues M.D. 2009 Fasciola, lymnaeids and human fascioliasis, with a global overview on disease transmission, epidemiology, evolutionary genetics, molecular epidemiology and control Adv Parasitol 69 41 146 10.1016/S0065-308X(09)69002-319622408Open DOISearch in Google Scholar

Massot, M., Senouci-Hor, K. (1983): Étude de la répartition de Lymnaea truncatola dans le nord-ouest algérien et de sa réceptivité a Fasciola hepatica. [Study of the distribution of Lymnaea truncatola in northwestern Algeria and its receptivity to Fasciola hepatica.] Ann. Parasitol. Hum. Comp., 58: 19–25. DOI: 10.1051/parasite/1983581019 Massot M. Senouci-Hor K. 1983 Étude de la répartition de Lymnaea truncatola dans le nord-ouest algérien et de sa réceptivité a Fasciola hepatica [Study of the distribution of Lymnaea truncatola in northwestern Algeria and its receptivity to Fasciola hepatica.] Ann. Parasitol. Hum. Comp 58 19 25 10.1051/parasite/1983581019Open DOISearch in Google Scholar

Mehmood, K., Hui, Z., Sabir, A.J., Abas, R.Z., Ijaz, M., Durani, A.Z., Saleem, M.H., Rehman, M.U., Iqbal, M.K., Wang, Y., Ahmad, H.I., Abas, T., Hussain, R., Ghori, M.T., Ali, S., Khan, A.U., Li, J. (2017): A review on epidemiology, global prevalence and economical losses of fasciolosis in ruminants. Microb Pathog, 109: 253–262. DOI: 10.1016/j.micpath.2017.06.006. Mehmood K. Hui Z. Sabir A.J. Abas R.Z. Ijaz M. Durani A.Z. Saleem M.H. Rehman M.U. Iqbal M.K. Wang Y. Ahmad H.I. Abas T. Hussain R. Ghori M.T. Ali S. Khan A.U. Li J. 2017 A review on epidemiology, global prevalence and economical losses of fasciolosis in ruminants Microb Pathog 109 253 262 10.1016/j.micpath.2017.06.006.Open DOISearch in Google Scholar

Mekroud, A., Benakhla, A., Vignoles, P., Rondelaud, D., Dreyfus, J. (2004): Preliminary studies on the prevalences of natural fasciolosis in cattle, sheep, and the host snail (Galba truncatula) in north-eastern Algeria. Parasitol Res, 92: 502–505. DOI: 10.1007/s00436-004-1072-1 Mekroud A. Benakhla A. Vignoles P. Rondelaud D. Dreyfus J. 2004 Preliminary studies on the prevalences of natural fasciolosis in cattle, sheep, and the host snail (Galba truncatula) in north-eastern Algeria Parasitol Res 92 502 505 10.1007/s00436-004-1072-114999466Open DOISearch in Google Scholar

Miler, M.A., Pfeifer, W., Schwartz, T. (2010): Creating the CIPRES Science Gateway for inference of large phylogenetic trees. In Proceedings of the 2010 gateway computing environments workshop (GCE), New Orleans, LA, USA, 14 November 2010 Miler M.A. Pfeifer W. Schwartz T. 2010 Creating the CIPRES Science Gateway for inference of large phylogenetic trees In Proceedings of the 2010 gateway computing environments workshop (GCE) New Orleans, LA, USA 14 November 201010.1109/GCE.2010.5676129Search in Google Scholar

Mucheka, V.T., Lamb, J.M., Pfukenyi, D.M., Mukaratirwa, S. (2015): DNA sequence analyses reveal co-occurrence of novel genotypes of Fasciola gigantica (Fasciolidae, Echinostomida, Trematoda) with F. hepatica in South Africa and Zimbabwe. Vet Parasitol, 214: 144–151. DOI: 10.1016/j.vetpar.2015.09.024 Mucheka V.T. Lamb J.M. Pfukenyi D.M. Mukaratirwa S. 2015 DNA sequence analyses reveal co-occurrence of novel genotypes of Fasciola gigantica (Fasciolidae, Echinostomida, Trematoda) with F hepatica in South Africa and Zimbabwe. Vet Parasitol 214 144 151 10.1016/j.vetpar.2015.09.02426476916Open DOISearch in Google Scholar

Nolan, M.J., Crib, T.H. (2005): The use and implications of ribosomal DNA sequencing for the discrimination of digenean species. Adv Parasitol, 60: 102–163. DOI: 10.1016/S0065-308X(05)60002-4 Nolan M.J. Crib T.H. 2005 The use and implications of ribosomal DNA sequencing for the discrimination of digenean species Adv Parasitol 60 102 163 10.1016/S0065-308X(05)60002-416230103Open DOISearch in Google Scholar

Ouchene-Khelifi, N.A., Ouchene, N., Dahmani, H., Dahmani, A., Said, M., Douifi, M. (2018): Fasciolosis due to Fasciola hepatica in ruminants in abattoirs and its economic impact in two regions in Algeria. Trop Biomed, 35: 181–187 Ouchene-Khelifi N.A. Ouchene N. Dahmani H. Dahmani A. Said M. Douifi M. 2018 Fasciolosis due to Fasciola hepatica in ruminants in abattoirs and its economic impact in two regions in Algeria Trop Biomed 35 181 187Search in Google Scholar

Paradis, E., Claude, J., Strimer, K. (2004): APE: Analyses of phylogenetics and evolution in R language. Bioinformatics, 20: 289–290. DOI: 10.1093/bioinformatics/btg412 Paradis E. Claude J. Strimer K. 2004 APE: Analyses of phylogenetics and evolution in R language Bioinformatics 20 289 290 10.1093/bioinformatics/btg41214734327Open DOISearch in Google Scholar

Peakal, R., Smouse, P.E. (2012): GenAlEx 6.5: Genetic analysis in excel. Population genetic software for teaching and research - an update. Bioinformatics, 28: 2537–2539. DOI: 10.1093/bioinformatics/bts460 Peakal R. Smouse P.E. 2012 GenAlEx 6.5: Genetic analysis in excel Population genetic software for teaching and research - an update. Bioinformatics 28 2537 2539 10.1093/bioinformatics/bts460346324522820204Open DOISearch in Google Scholar

Periago, M., Valero, M., Sayed, M., Ashrafi, K., Wakeel, A., Mohamed, M., Desquesnes, M., Curtale, F., Mas-Coma, S. (2008): First phyenotypic description of Fasciola hepatica/Fasciola gigantica intermediate forms from human endemic area of the Nile Delta Egypt. Infect Genet Evol, 8: 51–58. DOI: 10.1016/j.meegid.2007.10.001 Periago M. Valero M. Sayed M. Ashrafi K. Wakeel A. Mohamed M. Desquesnes M. Curtale F. Mas-Coma S. 2008 First phyenotypic description of Fasciola hepatica/Fasciola gigantica intermediate forms from human endemic area of the Nile Delta Egypt Infect Genet Evol 8 51 58 10.1016/j.meegid.2007.10.00118006385Open DOISearch in Google Scholar

Periago, M.V., Valero, M.A., Panova, M., Mas-Coma, S. (2006): Phenotypic comparison of allopatric populations of Fasciola hepatica and Fasciola gigantica from European and African bovines using a computer image analysis system (CIAS). Parasitol Res, 99: 368–378. DOI: 10.1007/s00436-006-0174-3 Periago M.V. Valero M.A. Panova M. Mas-Coma S. 2006 Phenotypic comparison of allopatric populations of Fasciola hepatica and Fasciola gigantica from European and African bovines using a computer image analysis system (CIAS) Parasitol Res 99 368 378 10.1007/s00436-006-0174-316568331Open DOISearch in Google Scholar

Pons, J., Barraclough, T.G., Gomez-Zurita, J., Cardoso, A., Duran, D.P., Hazell, S., Kamoun, S., Sumlin, W.D., Vogler, A.P. (2006): Sequence-based species delimitation for the DNA taxonomy of undescribed insects. Syst Biol, 55: 595–609. DOI: 10.1080/10635150600852011 Pons J. Barraclough T.G. Gomez-Zurita J. Cardoso A. Duran D.P. Hazell S. Kamoun S. Sumlin W.D. Vogler A.P. 2006 Sequence-based species delimitation for the DNA taxonomy of undescribed insects Syst Biol 55 595 609 10.1080/1063515060085201116967577Open DOISearch in Google Scholar

Posada, D. (2008): jModelTest: Phylogenetic Model Averaging. Mol Biol Evol, 25, 1253–1256. DOI: 10.1093/molbev/msn083 Posada D. 2008 jModelTest: Phylogenetic Model Averaging Mol Biol Evol 25 1253–1256 10.1093/molbev/msn08318397919Open DOISearch in Google Scholar

Puillandre, N., Brouillet, S., Achaz, G. (2020): ASAP: assemble species by automatic partitioning. Mol Ecol Resour, 21: 609–620. DOI: 10.1111/1755-0998.13281 Puillandre N. Brouillet S. Achaz G. 2020 ASAP: assemble species by automatic partitioning Mol Ecol Resour 21 609 620 10.1111/1755-0998.1328133058550Open DOISearch in Google Scholar

Robinson, M.W., Dalton, J.P. (2009): Zoonotic helminth infections with particular emphasis on fasciolosis and other trematodiases. Philos Trans R Soc Lond B Biol Sci, 364: 2763–2776. DOI: 10.1098/rstb.2009.0089 Robinson M.W. Dalton J.P. 2009 Zoonotic helminth infections with particular emphasis on fasciolosis and other trematodiases Philos Trans R Soc Lond B Biol Sci 364 2763 2776 10.1098/rstb.2009.0089286509219687044Open DOISearch in Google Scholar

Ronquist, F., Teslenko, M., Van Der Mark, P., Ayres, D.L., Darling, A., Höhna, S., Larget, B., Liu, L., Suchard, M.A., Huelsenbeck, J.P. (2012): MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol, 61: 539–542. DOI: 10.1093/sysbio/sys029 Ronquist F. Teslenko M. Van Der Mark P. Ayres D.L. Darling A. Höhna S. Larget B. Liu L. Suchard M.A. Huelsenbeck J.P. 2012 MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space Syst Biol 61 539 542 10.1093/sysbio/sys029332976522357727Open DOISearch in Google Scholar

Saitou, N., Nei, M. (1987): The neighbor-joining method: A new method for reconstruction of phylogenetic trees. Mol Biol Evol, 4: 406–425 Saitou N. Nei M. 1987 The neighbor-joining method: A new method for reconstruction of phylogenetic trees Mol Biol Evol 4 406 425Search in Google Scholar

Santos, R. (2012): Genetic characterization of Portuguese Fasciola hepatica isolates. Master’s degree in molecular, Genetics and Biomedicine. Universidade Nova de Lisboa, Portugal, pp. 80 Santos R. 2012 Genetic characterization of Portuguese Fasciola hepatica isolates. Master’s degree in molecular, Genetics and Biomedicine Universidade Nova de Lisboa Portugal pp 80Search in Google Scholar

Scarpa , F., Sanna, D., Cossu, P., Lai, T., Casu, M., Curini-Galletti, M. (2019a): How to achieve internal fertilization without a vagina: the study case of the genus Archilina Ax, 1959 (Platyhelminthes, Proseriata) from Canary Islands. Mar Biodivers, 49: 2057–2073. DOI: 10.1007/s12526-018-0890-9 Scarpa F. Sanna D. Cossu P. Lai T. Casu M. Curini-Galletti M. 2019a How to achieve internal fertilization without a vagina: the study case of the genus Archilina Ax, 1959 (Platyhelminthes, Proseriata) from Canary Islands Mar Biodivers 49 2057 2073 10.1007/s12526-018-0890-9Open DOISearch in Google Scholar

Scarpa , F., Cossu, P., Sanna, D., Lai, T., Casu, M., Curini-Galletti, M. (2019b): New insights on the genus Otoplana Du Plessis, 1889 (Platyhelminthes: Proseriata), with description of two new species from the Canary Islands. Mar Biodivers, 49: 2075–2087. DOI: 10.1007%2Fs12526-017-0785-1 Scarpa F. Cossu P. Sanna D. Lai T. Casu M. Curini-Galletti M. 2019b New insights on the genus Otoplana Du Plessis, 1889 (Platyhelminthes: Proseriata), with description of two new species from the Canary Islands Mar Biodivers 49 2075 2087 10.1007%2Fs12526-017-0785-1Open DOISearch in Google Scholar

Scarpa , F., Sanna, D., Cossu, P., Lai, T., Curini-Galletti, M., Casu, M. (2018): A molecular approach to the reconstruction of the pre-Lessepsian fauna of the Isthmus of Suez: the case of the interstitial flatworm Monocelis lineata sensu lato (Platyhelminthes: Proseriata). J Exp Mar Biol Ecol, 502: 174–181. DOI: 10.1016/j. jembe.2017.08.011 Scarpa F. Sanna D. Cossu P. Lai T. Curini-Galletti M. Casu M. 2018 A molecular approach to the reconstruction of the pre-Lessepsian fauna of the Isthmus of Suez: the case of the interstitial flatworm Monocelis lineata sensu lato (Platyhelminthes: Proseriata) J Exp Mar Biol Ecol 502 174 181 10.1016/j.jembe.2017.08.011Open DOISearch in Google Scholar

Semyenova, S.K., Morozova, E.V., Chrisanfova, G.G., Gorokhov, V.V., Arkhipov, I.A., Moskvin, A.S., Movsessyan, S.O., Ryskov, A.P. (2006): Genetic differentiation in eastern European and western Asian populations of the liver fluke, Fasciola hepatica, as revealed by mitochondrial nad1 and cox1 genes. J Parasitol, 92: 525–530. DOI: 10.1645/GE-673R.1 Semyenova S.K. Morozova E.V. Chrisanfova G.G. Gorokhov V.V. Arkhipov I.A. Moskvin A.S. Movsessyan S.O. Ryskov A.P. 2006 Genetic differentiation in eastern European and western Asian populations of the liver fluke, Fasciola hepatica, as revealed by mitochondrial nad1 and cox1 genes J Parasitol 92 525 530 10.1645/GE-673R.116883995Open DOISearch in Google Scholar

Shoriki, T., Ichikawa-Seki, M., Suganuma, K., Naito, I., Hayashi, K., Nakao, M., Aita, J., Mohanta, U.K., Inoue, N., Murakami, K., Itagaki, T. (2016): Novel methods for the molecular discrimination of Fasciola spp. on the basis of nuclear protein-coding genes. Parasitol Int, 65: 180–183. DOI: 10.1016/j.parint.2015.12.002 Shoriki T. Ichikawa-Seki M. Suganuma K. Naito I. Hayashi K. Nakao M. Aita J. Mohanta U.K. Inoue N. Murakami K. Itagaki T. 2016 Novel methods for the molecular discrimination of Fasciola spp on the basis of nuclear protein-coding genes. Parasitol Int 65 180 183 10.1016/j.parint.2015.12.00226680160Open DOISearch in Google Scholar

Sievers, F., Higgins, D.G. (2014): Clustal Omega. Curr Protoc Bioinformatics, 48: 1.25.1–1.25.33. DOI: 10.1002/0471250953. bi0313s48 Sievers F. Higgins D.G. 2014 Clustal Omega Curr Protoc Bioinformatics 48 1.25.1–1.25.33 10.1002/0471250953.bi0313s4825501942Open DOISearch in Google Scholar

Simsek, S., Utuk, A.E., Balkaya, I. (2011): Molecular differentiation of Turkey cattle isolates of Fasciola hepatica and Fasciola gigantica Helmintologia, 48(1): 3–7. DOI: 10.2478/s11687-011-0001-y Simsek S. Utuk A.E. Balkaya I. 2011 Molecular differentiation of Turkey cattle isolates of Fasciola hepatica and Fasciola gigantica Helmintologia 48 1 3 7 10.2478/s11687-011-0001-yOpen DOISearch in Google Scholar

Soriano A.R., Ramos-Onsins S.E., Rozas J., Calafell F., Navarro A. (2008): Statistical power analysis of neutrality tests under demographic expansions, contractions and bottlenecks with recombination. Genetics, 179: 555–567. DOI: 10.1534/genetics.107.083006 Tajima, F. (1989): Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics, 123: 585–589 Soriano A.R. Ramos-Onsins S.E. Rozas J. Calafell F. Navarro A. 2008 Statistical power analysis of neutrality tests under demographic expansions, contractions and bottlenecks with recombination Genetics 179 555 567 10.1534/genetics.107.083006 Tajima, F. (1989): Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123 585-589239063218493071Open DOISearch in Google Scholar

Thang, T.N., Vázquez-Prieto, S., Vilas, R., Paniagua, E., Ubeira, F.M., Ichikawa-Seki, M. (2020): Genetic diversity of Fasciola hepatica in Spain and Peru. Parasitol Int, 76: 102100. DOI: 10.1016/j. parint.2020.102100 Thang T.N. Vázquez-Prieto S. Vilas R. Paniagua E. Ubeira F.M. Ichikawa-Seki M. 2020 Genetic diversity of Fasciola hepatica in Spain and Peru Parasitol Int 76 102100 10.1016/j.parint.2020.10210032145389Open DOISearch in Google Scholar

Valero, M.A., Bargues, M.D., Calderon, L., Artigas, P., Mas-Coma, S. (2018): First phenotypic and genotypic description of Fasciola hepatica infecting highland cattle in the state of Mexico. Infect Genet Evol, 64: 231–240. DOI: 10.1016/j.meegid.2018.06.032 Valero M.A. Bargues M.D. Calderon L. Artigas P. Mas-Coma S. 2018 First phenotypic and genotypic description of Fasciola hepatica infecting highland cattle in the state of Mexico Infect Genet Evol 64 231 240 10.1016/j.meegid.2018.06.03229991456Open DOISearch in Google Scholar

Walker, S.M., Prodohl, P.A., Fletcher, H.L., Hanna, R.E., Kantzoura, V., Hoey, E.M., Trudgett, A. (2007): Evidence for multiple mitochondrial lineages of Fasciola hepatica (liver fluke) within infrapopulations from cattle and sheep. Parasitol Res, 101: 117–125. DOI: 10.1007/s00436-006-0440-4 Walker S.M. Prodohl P.A. Fletcher H.L. Hanna R.E. Kantzoura V. Hoey E.M. Trudgett A. 2007 Evidence for multiple mitochondrial lineages of Fasciola hepatica (liver fluke) within infrapopulations from cattle and sheep Parasitol Res 101 117 125 10.1007/s00436-006-0440-417216485Open DOISearch in Google Scholar