[
Altschul S.F., W. Gish, W. Miller, E.W. Myers and D.J. Lipman. 1990. Basic local alignment search tool. J. Mol. Biol. 215: 403–410.10.1016/S0022-2836(05)80360-2]Search in Google Scholar
[
Belgini D.R.B., R.S. Dias, V.M. Siqueira, L.A.B. Valadares, J.M. Albanese, R.S. Souza, A.P.R. Torres, M.P. Sousa, C.C. Silva, S.O. De Paula and others. 2014. Culturable bacterial diversity from a feed water of a reverse osmosis system, evaluation of biofilm formation and biocontrol using phages. World J. Microb. Biot. 30: 2689–2700.
]Search in Google Scholar
[
Chen Y., B. Lian, Z.Y. Ying and Y. Tang. 2014. Weathering of carbonate rocks by biological soil crusts in Karst areas. J. Earth. Sci. 25: 662-667.10.1007/s12583-014-0455-1
]Search in Google Scholar
[
Cole J.R., B. Chai, T.L. Marsh, R.J. Farris, Q. Wang, S.A. Kulam, S. Chandra, D.M. McGarrell, T.M. Schmidt, G.M. Garrity and others. 2003. The ribosomal database project (rdp-ii): Previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy. Nucleic Acids Res. 31: 442–443.10.1093/nar/gkg03916548612520046
]Search in Google Scholar
[
Cui Z.S., Q.L. Lai, C.M. Dong and Z.Z. Shao. 2008. Biodiversity of polycyclic aromatic hydrocarbon-degrading bacteria from deep sea sediments of the Middle Atlantic Ridge. Environ. Microbiol. 8: 2138–2149.10.1111/j.1462-2920.2008.01637.x270250418445026
]Search in Google Scholar
[
De Leo F., A. Iero, G. Zammit and C.E. Urzì. 2012. Chemoorgano- trophic bacteria isolated from biodeteriorated surfaces in cave and catacombs. Int. J. Speleol. 2: 125–136.10.5038/1827-806X.41.2.1
]Search in Google Scholar
[
Dong H.L., J.A. Rech, H.C. Jiang, H. Sun and B.J. Buck. 2007. Endolithic cyanobacteria in soil gypsum: Occurrences in Atacama (Chile), Mojave (United States), and Al-Jafr Basin (Jordan) deserts. J. Geophys. Res. 112: 339–343.
]Search in Google Scholar
[
Friedmann E.I. 1982. Endolithic microorganisms in the antarctic cold desert. Science 215: 1045–1053.10.1126/science.215.4536.104517771821
]Search in Google Scholar
[
Gerrath J.F., J.A. Gerrath, U. Matthes and D.W. Larson. 2000. Endolithic algae and cyanobacteria from cliffs of the Niagara Escarpment, Ontario, Canada. Can. J. Bot. 78: 807–815.
]Search in Google Scholar
[
Gorbushina A.A., K. Whitehead, T. Dornieden, A. Niesse, A. Schulte and J.I. Hedges. 2003. Black fungal colonies as units of survival: Hyphal mycosporines synthesized by rock-dwelling microcolonial fungi. Can. J. Bot-Revue Canadienne Botan. 81: 131–138.10.1139/b03-011]Search in Google Scholar
[
Gorbushina A.A., J. Heyrman, T. Dornieden, M. Gonzalez- Delvalle, W. E. Krumbein, L. Laiz, K. Petersen, C. Saiz-Jimenez and J. Swings. 2004. Bacterial and fungal diversity and biodeterioration problems in mural painting environments of st. Martins Church (Greene-kreiensen, Germany). Int. Biodeterior. Biodegrad. 53: 13–24.10.1016/j.ibiod.2003.07.003
]Search in Google Scholar
[
Gorbushina A.A. 2007. Life on the rocks. Environ. Microbiol. 9: 1613–1631.10.1111/j.1462-2920.2007.01301.x17564597
]Search in Google Scholar
[
Horath T. and R. Bachofen. 2009. Molecular characterization of an endolithic microbial community in Dolomite rock in the Central Alps (Switzerland). Microbial Ecol. 58: 290–306.10.1007/s00248-008-9483-719172216
]Search in Google Scholar
[
Huber T., G. Faulkner and P. Hugenholtz. 2004. Bellerophon: A program to detect chimeric sequences in multiple sequence alignments. Bioinformatics. 20: 2317–2319.10.1093/bioinformatics/bth226
]Search in Google Scholar
[
Kimura M. 1980. A simple model for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16: 111–120.10.1007/BF01731581
]Search in Google Scholar
[
Krakova L., F. De Leo, L. Bruno, D. Pangallo and C. Urzi. 2015. Complex bacterial diversity in the white biofilms of the Catacombs of St. Callixtus in Rome evidenced by different investigation strategies. Environ. Microbiol. 84: 81–790.10.1111/1462-2920.12626
]Search in Google Scholar
[
Kumar S., K. Tamura and M. Nei. 2004. Mega3: Integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform. 5: 150–163.10.1093/bib/5.2.150
]Search in Google Scholar
[
Lian B., Y. Chen and Y. Tang. 2010. Microbes on carbonate rocks and pedogenesis in karst regions. J. Earth. Sci. 21: 293–296.10.1007/s12583-010-0240-8]Search in Google Scholar
[
Lian B., D.X. Yuan and Z.H. Liu. 2011. Effect of microbes on karstification in karst ecosystems. Chinese Sci. Bull. 56: 3743–3747.10.1007/s11434-011-4648-z
]Search in Google Scholar
[
Ma Y.F., L. Wang and Z.Z. Shao. 2006. Pseudomonas, the dominant polycyclic aromatic hydrocarbon-degrading bacteria isolated from Antarctic soils and the role of large plasmids in horizontal gene transfer. Environ. Microbiol. 8: 455–465.
]Search in Google Scholar
[
Papida S., W. Murphy and E. May. 2000. Enhancement of physical weathering of building stones by microbial populations. Int. Bio- deterior. Biodegrad. 46: 305–317.10.1016/S0964-8305(00)00102-5
]Search in Google Scholar
[
Roldan M., C. Ascaso and J. Wierzchos. 2014. Fluorescent fingerprints of endolithic phototrophic cyanobacteria living within halite rocks in the Atacama desert. Appl. Environ. Microbiol. 80: 2998–3006.10.1128/AEM.03428-13401892824610843]Search in Google Scholar
[
Selbmann L., E. Egidi, D. Isola, S. Onofri, G.S. de Hoog, S. Chinaglia, L. Testa, S. Tosi, A. Balestrazzi, A. Lantieri and others. 2013. Biodiversity, evolution and adaptation of fungi in extreme environments. Plant Biosyst. 147: 237–246.
]Search in Google Scholar
[
Sigler W.V., R. Bachofen and J. Zeyer. 2003. Molecular characterization of endolithic cyanobacteria inhabiting exposed dolomite in central Switzerland. Environ. Microbiol. 5: 618–627.10.1046/j.1462-2920.2003.00453.x12823194
]Search in Google Scholar
[
Spring S., N. Brinkmann, M. Murrja, C. Sproer, J. Reitner and H.P. Klenk. 2015. High diversity of culturable prokaryotes in a lithifying hypersaline microbial mat. Geomicrobiol. J. 32: 332–346.10.1080/01490451.2014.913095
]Search in Google Scholar
[
Stackebrandt E. and J. Ebers. 2006. Taxonomic parameters revisited: Tarnished gold standards. Microbiol. Today 33: 1525–1155.
]Search in Google Scholar
[
Sterflinger K. 2000. Fungi as geologic agents. Geomicrobiol. J. 17: 97–124.10.1080/01490450050023791
]Search in Google Scholar
[
Tamaki H., Y. Sekiguchi, S. Hanada, K. Nakamura, N. Nomura, M. Matsumura and Y. Kamagata. 2005. Comparative analysis of bacterial diversity in freshwater sediment of a shallow eutrophic lake by molecular and improved cultivation-based techniques. Appl. Environ. Microbiol. 71: 2162–2169.10.1128/AEM.71.4.2162-2169.2005
]Search in Google Scholar
[
Tang Y. and B. Lian. 2012. Diversity of endolithic fungal communities in dolomite and limestone rocks from Nanjiang Canyon in Guizhou karst area, China. Can. J. Microbiol. 58: 685–693.10.1139/w2012-042
]Search in Google Scholar
[
Tang Y., B. Lian, H.L. Dong, D.F. Liu and W.G. Hou. 2012. Endolithic bacterial communities in dolomite and limestone rocks from the Nanjiang Canyon in Guizhou karst area (China). Geomicrobiol. J. 29: 213–225.10.1080/01490451.2011.558560
]Search in Google Scholar
[
Thompson J.D., T.J. Gibson, F. Plewniak, F. Jeanmougin and D.G. Higgins. 1997. The clustal_x windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25: 4876–4882.10.1093/nar/25.24.4876
]Search in Google Scholar
[
Viles H.A. and A.A. Gorbushina. 2003. Soiling and microbial colo- niastion on urbon roadside limestone: A three year study in Oxford England. Build Environ. 38: 9–10.10.1016/S0360-1323(03)00078-7
]Search in Google Scholar
[
Walker J.J. and N.R. Pace. 2007a. Endolithic microbial ecosystems. Annu. Rev. Microbiol. 61: 331–347.10.1146/annurev.micro.61.080706.09330217506683
]Search in Google Scholar
[
Walker J.J. and N.R. Pace. 2007b. Phylogenetic composition of rocky mountain endolithic microbial ecosystems. Appl. Environ. Microbiol. 73: 3497–3504.10.1128/AEM.02656-06193266517416689
]Search in Google Scholar
[
Wierzchos J., C. Ascaso and C.P. McKay. 2006. Endolithic cyanobacteria in halite rocks from the hyperarid core of the Atacama desert. Astrobiology 6: 415–422.10.1089/ast.2006.6.41516805697
]Search in Google Scholar
[
Wong F.K.Y., M.C.Y. Lau, D.C. Lacap, J.C. Aitchison, D.A. Cowan and S.B. Pointing. 2010. Endolithic microbial colonization of limestone in a high-altitude arid environment. Microbial. Ecol. 59: 689–699.10.1007/s00248-009-9607-819937324
]Search in Google Scholar