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A Matlab-Based Approach for Estimating the Area Taken Up by Cells Attached to Micropatterned Optically Opaque Surfaces


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Alford, R., Simpson, H. M., Duberman, J., Hill, G. C., Ogawa, M., Regino, C., Kobayashi, H., Choyke, P. L. (2009). Toxicity of organic fluorophores used in molecular imaging: Literature review. Mol. Imaging, 8 (6), 7290.2009.00031. https://doi.org/10.2310/7290.2009.00031. Search in Google Scholar

Ansari, A. M., Ahmed, A. K., Matsangos, A. E., Lay, F., Born, L. J., Marti, G., Harmon, J. W., Sun, Z. (2016). Cellular GFP toxicity and immunogenicity: Potential confounders in in vivo cell tracking experiments. Stem Cell Rev. Rep., 12 (5), 553–559. https://doi.org/10.1007/s12015-016-9670-8. Search in Google Scholar

Bacakova, L., Filova, E., Parizek, M., Ruml, T., Svorcik, V. (2011). Modulation of cell adhesion, proliferation and differentiation on materials designed for body implants. Biotechnol. Adv., 29 (6), 739–767. https://doi.org/10.1016/j.biotechadv.2011.06.004. Search in Google Scholar

Baltacis, K., Bystrov, V., Bystrova, A., Dekhtyar, Y., Freivalds, T., Raines, J., Rozenberga, K., Sorokins, H., Zeidaks, M. (2020). Physical fundamentals of biomaterials surface electrical Functionalization. Materials, 13 (20), 4575. https://doi.org/10.3390/ma13204575. Search in Google Scholar

Cadena-Herrera, D., Esparza-De Lara, J. E., Ramírez-Ibañez, N. D., López-Morales, C. A., Pérez, N. O., Flores-Ortiz, L. F., Medina-Rivero, E. (2015). Validation of three viable-cell counting methods: Manual, semi-automated, and automated. Biotechnol. Rep., 7, 9–16. https://doi.org/10.1016/j.btre.2015.04.004. Search in Google Scholar

Chan, T. F., & Vese, L. A. (2001). Active contours without edges. IEEE Transactions on Image Processing, 10 (2), 266–277. https://doi.org/10.1109/83.902291. Search in Google Scholar

Chen, S., Nakamoto, T., Kawazoe, N., Chen, G. (2015). Engineering multi-layered skeletal muscle tissue by using 3D microgrooved collagen scaffolds. Biomaterials, 73, 23. https://doi.org/10.1016/j.biomaterials.2015.09.010. Search in Google Scholar

Cuello, E. A., Mulko, L. E., Barbero, C. A., Acevedo, D. F., Yslas, E. I. (2020). Development of micropatterning polyimide films for enhanced antifouling and antibacterial properties. Colloids Surf. B: Biointerfaces, 188, 110801. https://doi.org/10.1016/j.colsurfb.2020.110801. Search in Google Scholar

Cui, Y., Huo, B., Sun, S., Yang, F., Gao, Y., Pan, J., Long, M. (2011). Fluid dynamics snalysis of a novel micropatterned cell bioreactor. Ann. Biomed. Eng., 39 (5), 1592–1605. https://doi.org/10.1007/s10439-011-0250-4. Search in Google Scholar

Ermis, M., Antmen, E., Hasirci, V. (2018). Micro and nanofabrication methods to control cellsubstrate interactions and cell behavior: A review from the tissue engineering perspective. Bioactive Mater., 3 (3), 355–369. https://doi.org/10.1016/j.bioactmat.2018.05.005 Search in Google Scholar

Gentili, E., Tabaglio, L., Aggogeri, F. (2005). Review on micromachining techniques. AMST 05. Adv. Manufact. Syst. Technol., 486, 387–396. https://doi.org/10.1007/3-211-38053-1_37. Search in Google Scholar

Harrington, B., Gould, T., Hurst, N., Inkscape’s Contributors. (n.d.). Inkscape. Inkscape: Open Source Scalable Vector Graphics Editor. https://inkscape.org/ (accessed 22 November 2020). Search in Google Scholar

Li, Y., Xiao, Y., Liu, C. (2017). The horizon of materiobiology: A perspective on material-guided cell behaviors and tissue engineering. Chem. Rev., 117 (5), 4376–4421. https://doi.org/10.1021/acs.chemrev.6b00654. Search in Google Scholar

MathWorks Nordic. Get Started with Image Processing Toolbox – MathWorks Nordic. (2020). https://se.mathworks.com/help/images/getting-startedhttps://se.mathworks.com/help/images/getting-started-with-image-processing-toolbox.htmlwith-image-processing-toolbox.html (accessed 22.11.2020). Search in Google Scholar

Nikkhah, M., Edalat, F., Manoucheri, S., Khademhosseini, A. (2012). Engineering microscale topographies to control the cell–substrate interface. Biomaterials, 33 (21), 5230–5246. https://doi.org/10.1016/j.biomaterials.2012.03.079. Search in Google Scholar

Pelaez-Vargas, A., Gallego-Perez, D., Magallanes-Perdomo, M., Fernandes, M. H., Hansford, D. J., De Aza, A. H., Pena, P., Monteiro, F. J. (2011). Iso-tropic micropatterned silica coatings on zirconia induce guided cell growth for dental implants. Dental Mater., 27 (6), 581–589. https://doi.org/10.1016/j.dental.2011.02.014. Search in Google Scholar

Tirrell, M., Kokkoli, E., Biesalski, M. (2002). The role of surface science in bioengineered materials. Surf. Sci., 500 (1–3), 61–83. https://doi.org/10.1016/s0039-6028(01)01548-5. Search in Google Scholar

Wu, S., Liu, X., Yeung, K. W. K., Liu, C., Yang, X. (2014). Biomimetic porous scaffolds for bone tissue engineering. Mater. Sci. Eng., 80, 1–36. https://doi.org/10.1016/j.mser.2014.04.001. Search in Google Scholar

Zitová, B., Flusser, J. (2003). Image registration methods: A survey. Image Vision Comput., 21 (11), 977–1000. https://doi.org/10.1016/s0262-8856(03)00137-9. Search in Google Scholar

eISSN:
2255-890X
Language:
English
Publication timeframe:
6 times per year
Journal Subjects:
General Interest, Mathematics, General Mathematics