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Remodelling of the healthy foal’s conjunctival microbiome in the first two months of life

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Jan 31, 2025

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Bolyen E., Rideout J.R., Dillon M.R., Bokulich N.A., Abnet C.C., Al-Ghalith G.A., Alexander H., Alm E.J., Arumugam M., Asnicar F., Bai Y., Bisanz J.E., Bittinger K., Brejnrod A., Brislawn C.J., Brown C.T., Callahan B.J., Caraballo-Rodriguez A.M., Chase J., Cope E.K., Da Silva R., Diener C., Dorrestein P.C., Douglas G.M., Durall D.M., Duvallet C., Edwardson C.F., Ernst M., Estaki M., Fouquier J., Gauglitz J.M., Gibbons S.M., Gibson D.L., Gonzalez A., Gorlick K., Guo J., Hillmann B., Holmes S., Holste H., Huttenhower C., Huttley G.A., Janssen S., Jarmusch A.K., Jiang L., Kaehler B.D., Kang K.B., Keefe C.R., Keim P., Kelley S.T., Knights D., Koester I., Kościółek T., Kreps J., Langille M.G.I., Lee J., Ley R., Liu Y.X., Loftfield E., Lozupone C., Maher M., Marotz C., Martin B.D., McDonald D., McIver L.J., Melnik A.V., Metcalf J.L., Morgan S.C., Morton J.T., Naimey A.T., Navas-Molina J.A., Nothias L.F., Orchanian S.B., Pearson T., Peoples S.L., Petras D., Preuss M.L., Pruesse E., Rasmussen L.B., Rivers A., Robeson M.S., Rosenthal P., Segata N., Shaffer M., Shiffer A., Sinha R., Song S.J., Spear J.R., Swafford A.D., Thompson L.R., Torres P.J., Trinh P., Tripathi A., Turnbaugh P.J., Ul-Hasan S., van der Hooft J.J.J., Vargas F., Vázquez-Baeza Y., Vogtmann E., von Hippel M., Walters W., Wan Y., Wang M., Warren J., Weber K.C., Williamson C.H.D., Willis A.D., Xu Z.Z., Zaneveld J.R., Zhang Y., Zhu Q., Knight R., Caporaso J.G.: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2. Nat Biotechnol 2019, 37, 852–857, doi: 10.1038/s41587-019-0209-9. Bolyen E. Rideout J.R. Dillon M.R. Bokulich N.A. Abnet C.C. Al-Ghalith G.A. Alexander H. Alm E.J. Arumugam M. Asnicar F. Bai Y. Bisanz J.E. Bittinger K. Brejnrod A. Brislawn C.J. Brown C.T. Callahan B.J. Caraballo-Rodriguez A.M. Chase J. Cope E.K. Da Silva R. Diener C. Dorrestein P.C. Douglas G.M. Durall D.M. Duvallet C. Edwardson C.F. Ernst M. Estaki M. Fouquier J. Gauglitz J.M. Gibbons S.M. Gibson D.L. Gonzalez A. Gorlick K. Guo J. Hillmann B. Holmes S. Holste H. Huttenhower C. Huttley G.A. Janssen S. Jarmusch A.K. Jiang L. Kaehler B.D. Kang K.B. Keefe C.R. Keim P. Kelley S.T. Knights D. Koester I. Kościółek T. Kreps J. Langille M.G.I. Lee J. Ley R. Liu Y.X. Loftfield E. Lozupone C. Maher M. . Marotz C. Martin B.D. McDonald D. McIver L.J. Melnik A.V. Metcalf J.L. Morgan S.C. Morton J.T. Naimey A.T. Navas-Molina J.A. Nothias L.F. Orchanian S.B. Pearson T. Peoples S.L. Petras D. Preuss M.L. Pruesse E. Rasmussen L.B. Rivers A. Robeson M.S. Rosenthal P. Segata N. Shaffer M. Shiffer A. Sinha R. Song S.J. Spear J.R. Swafford A.D. Thompson L.R. Torres P.J. Trinh P. Tripathi A. Turnbaugh P.J. Ul-Hasan S. van der Hooft J.J.J. Vargas F. Vázquez-Baeza Y. Vogtmann E. von Hippel M. Walters W. Wan Y. Wang M. Warren J. Weber K.C. Williamson C.H.D. Willis A.D. Xu Z.Z. Zaneveld J.R. Zhang Y. Zhu Q. Knight R. Caporaso J.G. : Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 . Nat Biotechnol 2019 , 37 , 852 857 , doi: 10.1038/s41587-019-0209-9 . Open DOISearch in Google Scholar

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