Conducting antimicrobial resistance studies is imperative for selecting the most appropriate antimicrobial therapies and reducing the risk of further development and spread of antimicrobial resistance through the horizontal transfer of resistance genes. Investigations of the
16 kinds of antibacterial drugs and their classification
Drug category | Antibacterial drugs |
---|---|
penicillin | |
ampicillin | |
β-lactams | amoxicillin / clavulanic acid |
oxacillin | |
cefoxitin | |
Macrolides | erythromycin |
Lincosamides | clindamycin |
Aminoglycosides | gentamicin |
Tetracyclines | doxycycline tetracycline |
Chloramphenicols | florfenicol |
Ansamycins | rifampicin |
Glycopeptides | vancomycin |
Quinolones | ciprofloxacin |
Sulfonamides | sulfisoxazole |
sulfamethoxazole |
Primer sequence and reaction conditions of the drug resistance gene of
Antimicrobial drug class | Resistance gene | Primer sequence (5′–3′) | Annealing temperature (°C) | PCR product size (bp) | Reference |
---|---|---|---|---|---|
F: GGTGGCTGGGGGGTAGATGTATTAACTGG | |||||
Lincosamides | R: GCTCTCTTTGAAATACATGGTATTTTTCGATC | 56 | 323 | (23) | |
F: AACTTAGGCATTCTGGCTCAC | |||||
R: TCCCACTGTTCCATATCGTCA | 50 | 515 | (29) | ||
F: TCGATAGGAACAGCAGTA | |||||
R: CAGCAGATCCTACTCCTT | 44 | 169 | (33) | ||
Tetracyclines | |||||
F: GTGGACAAAGGTACAACGAG | 50 | 406 | |||
R: CGGTAAAGTTCGTCACACAC | |||||
(39) | |||||
F: CATAGACAAGCCGTTGACC | |||||
R: ATGTTTTTGGAACGCCAGAG | 48 | 667 | |||
F: CGAGTGAAAAAGTACTCAACC | 48 | 652 | |||
R: AGTAACGGTACTTAAATTGTTTAC | |||||
F: ATCTTTGAAATCGGCTCAGG | |||||
Macrolides | R: CAAACCCGTATTCCACGATT | 47 | 295 | (32) | |
F: GTTCAAGAACAATCAATACAGAG | |||||
R: GGATCAGGAAAAGGACATTTTAC | 48 | 421 |
F – forward; R – reverse
The program for amplification of the virulence gene was pre-denaturation at 95°C for 5 min, followed (as in the reaction for resistance genes) by denaturation at 94°C for 30 s, annealing at a temperature determined individually for each gene (Table 3), and extension at 72°C for 1 min. As previously, thirty cycles were performed, followed by incubation at 72°C for 10 min. The amplified products were electrophoresed on a 1% agarose gel with 1× tris-acetate-ethylenediaminetetraacetic acid buffer. Electrophoresis was performed at 120 V for 30 min with gel pictures taken afterwards using a Bio-Rad Gel Doc XR molecular imaging system (Bio-Rad, Hercules, CA, USA).
Primer sequence and reaction conditions of the virulence gene of
Virulence factor | Virulence gene | Primer sequence (5′–3′) | Annealing temperature (°C) | PCR size product (bp) |
---|---|---|---|---|
F: CATTGCGTAGTCACCTCCC | ||||
β-haemolysin/cytolysis | R: GGGTTTCCACAGTTGCTTGA | 54 | 399 | |
F: TAACAGTTATGATACTTCACAGAC ⎕ | ||||
αC protein | R: ACGACTTTCTTCCGTCCACTTAGG | 51 | 535 | |
F: CCAAGACTTCAGCCACAAGG | ||||
C5a peptidase | R: CAATTCCAGCCAATAGCAGC | 57 | 591 | |
F: ACCGTCTGAAATGATGTGG | ||||
Laminin binding protein | R: GATTGACGTTGTCTTCTGC | 51 | 572 | |
Glutamine synthetase | F: ACGTATGAACAGAGTTGGCTATAA | 52 | 471 | |
R: TCCTCTGATAATTGCATTCCAC | ||||
CAMP factor | F: ATGGGATTTGGGATAACTAAGCTAG | 52 | 193 | |
R: AGCGTGTATTCCAGATTTCCTTAT | ||||
Hyaluronidase | F: ACAAATGGAACGACGTGACTAT | 52 | 346 | |
R: CACCAATTGGCAGAGCCT | ||||
F: AAGCAACTAGAAGAGGAAGC | ||||
βC protein | R: TTCTGCTCTGGTGTTTTAGG | 53 | 479 | |
Bacterial immunogenic | F: AACCAGAAGCCAAGCCAGCAACC | 58 | 127 | |
adhesive | R: AGTGGACTTGCGGCTTCACCC | |||
F: CGGGATTGATCTAAGTCGCT | ||||
Invasion-associated gene | R: CCATCAACATCAGTCGCTAA | 53 | 459 | |
F: AGAGCCAAGTAGGTCAACTTATAG | ||||
Fibrin binding protein B | R: TTCATTGCGTCTCAAACCG | 54 | 290 |
F – forward; R – reverse; CAMP – Christie–Atkins–Munch-Peterson
Resistance to three or more antibiotics is the definition for a strain to be designated multi drug resistant (MDR). The result interpretation was performed according to the CLSI guidelines (9).
Minimum inhibitory concentration (MIC) values of, and resistance of
Isolate no. | MIC (μg/mL) | ||||||||
---|---|---|---|---|---|---|---|---|---|
PEN | A/C | AMP | CET | OXA | SMZ | SXT | TE | DOX | |
SH07 | ≤0.125 (S3) | 1/0.5 (R) | ≤0.125 (S) | 32 (R) | 1 (S) | 4 (S) | 0.5/9.5 (S) | 4 (S) | 4 (S) |
SH07-2 | 4 (R) | ≤0.25/0.12 (S) | ≤0.125 (S) | 0.5 (S) | 16 (R) | 256 (I) | 0.25/4.8 (S) | 16 (R) | 2 (S) |
SH12 | ≤0.125 (S) | ≤0.25/0.12 (S) | 0.25 (I) | 0.5 (S) | 4 (R) | 8 (S) | 0.5/9.5 (S) | 32 (R) | 4 (S) |
SH33 | ≤0.125 (S) | ≤0.25/0.12 (S) | ≤0.125 (S) | 0.5 (S) | 16 (R) | 64 (S) | 0.5/9.5 (S) | 32 (R) | 0.5 (S) |
SH45 | ≤0.125 (S) | ≤0.25/0.12 (S) | ≤0.125 (S) | 1 (S) | 32 (R) | 64 (S) | 0.25/4.8 (S) | 64 (R) | 2 (S) |
HLJ008 | ≤0.125 (S) | ≤0.25/0.12 (S) | ≤0.125 (S) | 32 (R) | 32 (R) | 128 (S) | 0.25/4.8 (S) | 32 (R) | 2 (S) |
HLJ048-2 | 2 (R) | ≤0.25/0.12 (S) | ≤0.125 (S) | 1 (S) | 4 (R) | 2 (S) | 0.5/9.5 (S) | 16 (R) | 8 (I) |
HLJ030-3 | ≤0.125 (S) | ≤0.25/0.12 (S) | ≤0.125 (S) | 0.5 (S) | 0.5 (S) | 64 (S) | 0.5/9.5 (S) | 64 (R) | 4 (S) |
NM025 | ≤0.125 (S) | ≤0.25/0.12 (S) | ≤0.125 (S) | 1 (S) | 1 (S) | 64 (S) | 0.25/4.8 (S) | 32 (R) | 16 (R) |
HB016 | ≤0.125 (S) | ≤0.25/0.12 (S) | ≤0.125 (S) | 0.25 (S) | 16 (R) | 128 (S) | 0.5/9.5 (S) | 16 (R) | 4 (S) |
NM-2-72-4 | 8 (R) | ≤0.25/0.12 (S) | 2 (R) | 1 (S) | 16 (R) | 128 (S) | 0.25/4.8 (S) | 32 (R) | 32 (R) |
NM-2-034-3 | 8 (R) | 16/8 (R) | 4 (R) | 0.5 (S) | 4 (R) | 64 (S) | 2/38 (I) | 4 (S) | 4 (S) |
SH-2-46-1 | ≤0.125 (S) | ≤0.25/0.12 (S) | ≤0.125 (S) | 0.5 (S) | 32 (R) | 128 (S) | 0.25/4.8 (S) | 16 (R) | 4 (S) |
SH-2-14-2 | 2 (R) | 4/2 (R) | ≤0.125 (S) | 1 (S) | 16 (R) | 128 (S) | 0.25/4.8 (S) | 32 (R) | 8 (I) |
SD-2-009-2 | ≤0.125 (S) | 16/8 (R) | ≤0.125 (S) | 0.5 (S) | 4 (R) | 128 (S) | 0.25/4.8 (S) | 8 (I) | 4 (S) |
Drug resistance rate (%) (/15) | |||||||||
S | 66.67 (10) | 73.33 (11) | 80.00 (12) | 86.67 (13) | 20.00 (3) | 93.33 (14) | 93.33 (14) | 13.33 (2) | 73.33 (11) |
I | 0 (0) | 0 (0) | 6.67 (1) | 0 (0) | 0 (0) | 6.67 (1) | 6.67 (1) | 6.67 (1) | 13.33 (2) |
R | 33.33 (5) | 26.67 (4) | 13.33 (2) | 13.33 (2) | 80.00 (12) | 0 (0) | 0 (0) | 80.00 (12) | 13.33 (2) |
PEN – penicillin; A/C – amoxicillin/clavulanic acid; AMP – ampicillin; CET – cefoxitin; OXA – oxacillin; SMZ – sulfisoxazole; SXT – sulfamethoxazole; TE – tetracycline; DOX – doxycycline
Fig. 1
Multiple drug resistance of

Minimum inhibitory concentration (MIC) values of, and resistance of
Isolate no. | MIC (μg/mL) | ||||||
---|---|---|---|---|---|---|---|
ERY | CLI | GM | CIP | FFC | RIF | VAN | |
SH07 | 16 (R) | 0.25 (S) | 4 (S) | 0.5 (S) | 2 (S) | 0.5 (S) | 0.5 (S) |
SH07-2 | 16 (R) | 4 (R) | 4 (S) | 0.5 (S) | 16 (R) | 0.125 (S) | 0.5 (S) |
SH12 | 32 (R) | 8 (R) | 16 (R) | 0.5 (S) | 4 (S) | 0.5 (S) | 0.5 (S) |
SH33 | 16 (R) | 8 (R) | 16 (R) | 0.5 (S) | 8 (I) | 0.5 (S) | 0.5 (S) |
SH45 | 64 (R) | 8 (R) | 2 (S) | 2 (I) | 8 (I) | 0.5 (S) | 0.5 (S) |
HLJ008 | 16 (R) | 4 (R) | 4 (S) | 0.5 (S) | 4 (S) | 0.5 (S) | 0.5 (S) |
HLJ048-2 | 16 (R) | 16 (R) | 8 (I) | 0.5 (S) | 4 (S) | 1 (S) | 0.5 (S) |
HLJ030-3 | 0.5 (S) | 16 (R) | 2 (S) | 0.5 (S) | 16 (R) | 0.5 (S) | 0.5 (S) |
NM025 | 16 (R) | 0.5 (S) | 1 (S) | 0.5 (S) | 8 (I) | 0.5 (S) | 0.5 (S) |
HB016 | 16 (R) | 4 (R) | 16 (R) | 0.5 (S) | 4 (S) | 0.5 (S) | 0.5 (S) |
NM-2-72-4 | 2 (I) | 0.5 (S) | 32 (R) | 0.5 (S) | 16 (R) | 0.5 (S) | 0.5 (S) |
NM-2-034-3 | 0.5 (S) | 16 (R) | 4 (S) | 4 (R) | 16 (R) | 0.5 (S) | 0.5 (S) |
SH-2-46-1 | 16 (R) | 0.5 (S) | 4 (S) | 0.5 (S) | 4 (S) | 0.5 (S) | 0.5 (S) |
SH-2-14-2 | 16 (R) | 16 (R) | 4 (S) | 4 (R) | 8 (I) | 0.5 (S) | 0.5 (S) |
SD-2-009-2 | 32 (R) | 0.5 (S) | 16 (R) | 4 (R) | 16 (R) | 0.5 (S) | 0.5 (S) |
Drug resistance rate (%) (/15) | |||||||
S | 13.33 (2) | 33.33 (5) | 60.00 (9) | 73.33 (11) | 40.00 (6) | 100 (15) | 100 (15) |
I | 6.67 (1) | 0 (0) | 6.67 (1) | 6.67 (1) | 26.67 (4) | 0 (0) | 0 (0) |
R | 80.00 (12) | 66.67 (10) | 33.33 (5) | 20.00 (3) | 33.33 (5) | 0 (0) | 0 (0) |
ERY – erythromycin; CLI – clindamycin; GM – gentamycin; CIP – ciprofloxacin; FFC – florfenicol; RIF – rifampicin; VAN – vancomycin
The strains’ positivity rates for
Relationship between drug resistance phenotype and drug resistance genotype of
Antibiotic type | Resistance gene | Genotype (%) | Phenotype resistance rate (%) | Consistency rate (%) | |
---|---|---|---|---|---|
Number of bacteria | Positive rate | ||||
11/15 | 73.33 | 91.66 | |||
Macrolides | 10/15 | 66.67 | 80.00 | 83.33 | |
5/15 | 33.33 | 41.66 | |||
Lincosamides | 9/15 | 60.00 | 66.67 | 89.99 | |
7/15 | 46.67 | 100.00 | |||
6/15 | 40.00 | 85.71 | |||
Tetracyclines | 6/15 | 40.00 | 46.67 | 85.71 | |
5/15 | 33.33 | 71.42 |
Fig. 2
Positive rate of

The combined virulence gene profile of
Virulence gene profile | Distributiona (%) |
---|---|
3 (20) | |
2 (13.33) | |
1 (6.67) | |
1 (6.67) | |
1 (6.67) | |
1 (6.67) | |
1 (6.67) | |
1 (6.67) | |
1 (6.67) | |
1 (6.67) | |
1 (6.67) |
a – Distribution was achieved based on the total numbers of 15
The drug resistance patterns and gene expression profiles of
Isolate no. | Drug resistance pattern | Resistant gene | Virulence gene |
---|---|---|---|
SH07 | (A/C)/CET/ERY | ||
SH07-2 | PEN/OXA/TE/ERY/CLI/FFC | ||
SH12 | OXA/TE/ERY/CLI/GM | ||
SH33 | OXA/TE/ERY/CLI/GM | ||
SH45 | OXA/TE/ERY/CLI | ||
HLJ008 | CET/OXA/TE/ERY/CLI | ||
HLJ030-3 | TE/CLI/FFC | ||
NM025 | TE/DOX/ERY | ||
HB016 | OXA/TE/ERY/CLI/GM | ||
SH-2-46-1 | OXA/TE/ERY |
A/C – amoxicillin/clavulanic acid; CET – cefoxitin; CLI – clindamycin; ERY – erythromycin; FFC – florfenicol; GM – gentamicin; OXA – oxacillin; PEN – penicillin; TE – tetracycline
Logistic regression analysis of the relationship between antibiotics and virulence genes
Virulence gene | Penicillin | Cefoxitin | Oxacillin | Doxycycline | Gentamicin | Clindamycin | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
B | Exp(B) | P | B | Exp(B) | P | B | Exp(B) | P | B | Exp(B) | P | B | Exp(B) | P | B | Exp(B) | P | |
40.537 | 4.028 | 0.999 | 1.099 | 3.000 | 1.000 | −42.406 | 0.000 | 0.999 | 1.099 | 3.000 | 1.000 | −41.307 | 0.000 | 0.999 | −61.799 | 0.000 | 0.999 | |
−20.269 | 0.000 | 1.000 | −60.718 | 0.000 | 0.999 | 62.916 | 2.108 | 0.999 | 19.699 | 3.590 | 1.000 | 62.105 | 9.369 | 0.999 | −62.493 | 0.000 | 0.999 | |
0.000 | 1.000 | 1.000 | −19.411 | 0.000 | 0.999 | −21.896 | 0.000 | 0.999 | −19.411 | 0.000 | 0.999 | −19.411 | 0.000 | 0.999 | −0.693 | 0.500 | 0.744 | |
−0.934 | 0.393 | 1.000 | 42.406 | 2.610 | 0.999 | −84.812 | 0.000 | 0.999 | −38.011 | 0.000 | 1.000 | −80.417 | 0.000 | 0.999 | −81.880 | 0.000 | 0.999 | |
42.406 | 2.610 | 0.999 | −40.209 | 0.000 | 0.999 | 42.406 | 2.610 | 0.999 | 40.209 | 2.900 | 0.999 | 40.209 | 2.900 | 0.999 | 0.000 | 1.000 | 1.000 | |
21.203 | 1.615 | 1.000 | −19.411 | 0.000 | 1.000 | −21.896 | 0.000 | 1.000 | −19.411 | 0.000 | 1.000 | −19.411 | 0.000 | 1.000 | −42.412 | 0.000 | 0.999 | |
−41.472 | 0.000 | 1.000 | −1.099 | 0.333 | 1.000 | 42.406 | 2.610 | 1.000 | −1.099 | 0.333 | 1.000 | 41.307 | 8.699 | 1.000 | −20.080 | 0.000 | 1.000 | |
0.000 | 1.000 | 1.000 | −1.099 | 0.333 | 1.000 | 42.406 | 2.610 | 0.999 | −1.099 | 0.333 | 1.000 | −1.099 | 0.333 | 1.000 | 21.203 | 1.615 | 1.000 |
Exp (B) – OR value, logarithmic ratio, equal to the exponential power of the regression coefficient
Bovine mastitis is often caused by
Antibiotics remain the preferred treatment for bovine mastitis. However, in recent years, with the improper use of antibiotics, the problems of drug residues and resistance have become increasingly serious, not only threatening human health, but also bringing new challenges to the treatment of bovine mastitis. This study showed that
Previous studies showed that
In
The PCR assay for the detection of virulence genes revealed that a high percentage of the
Research has found certain regional differences in the prevalence of
The genetic mechanisms of virulence and drug resistance are achieved through the transfer of genes and movable elements between species and genera, and virulence and drug resistance are also interrelated (3). Several studies have confirmed the relationship between drug resistance and bacteria virulence.
In conclusion, our study showed a high prevalence of multidrug-resistant
Fig. 1

Fig. 2

Relationship between drug resistance phenotype and drug resistance genotype of S. agalactiae
Antibiotic type | Resistance gene | Genotype (%) |
Phenotype resistance rate (%) | Consistency rate (%) | |
---|---|---|---|---|---|
Number of bacteria | Positive rate | ||||
11/15 | 73.33 | 91.66 | |||
Macrolides | 10/15 | 66.67 | 80.00 | 83.33 | |
5/15 | 33.33 | 41.66 | |||
Lincosamides | 9/15 | 60.00 | 66.67 | 89.99 | |
7/15 | 46.67 | 100.00 | |||
6/15 | 40.00 | 85.71 | |||
Tetracyclines | 6/15 | 40.00 | 46.67 | 85.71 | |
5/15 | 33.33 | 71.42 |
The combined virulence gene profile of S. agalactiae
Virulence gene profile | Distributiona (%) |
---|---|
3 (20) | |
2 (13.33) | |
1 (6.67) | |
1 (6.67) | |
1 (6.67) | |
1 (6.67) | |
1 (6.67) | |
1 (6.67) | |
1 (6.67) | |
1 (6.67) | |
1 (6.67) |
Primer sequence and reaction conditions of the drug resistance gene of S. agalactiae
Antimicrobial drug class | Resistance gene | Primer sequence (5′–3′) | Annealing temperature (°C) | PCR product size (bp) | Reference |
---|---|---|---|---|---|
F: GGTGGCTGGGGGGTAGATGTATTAACTGG | |||||
Lincosamides | R: GCTCTCTTTGAAATACATGGTATTTTTCGATC | 56 | 323 | ( |
|
F: AACTTAGGCATTCTGGCTCAC | |||||
R: TCCCACTGTTCCATATCGTCA | 50 | 515 | ( |
||
F: TCGATAGGAACAGCAGTA | |||||
R: CAGCAGATCCTACTCCTT | 44 | 169 | ( |
||
Tetracyclines | |||||
F: GTGGACAAAGGTACAACGAG | 50 | 406 | |||
R: CGGTAAAGTTCGTCACACAC | |||||
( |
|||||
F: CATAGACAAGCCGTTGACC | |||||
R: ATGTTTTTGGAACGCCAGAG | 48 | 667 | |||
F: CGAGTGAAAAAGTACTCAACC | 48 | 652 | |||
R: AGTAACGGTACTTAAATTGTTTAC | |||||
F: ATCTTTGAAATCGGCTCAGG | |||||
Macrolides | R: CAAACCCGTATTCCACGATT | 47 | 295 | ( |
|
F: GTTCAAGAACAATCAATACAGAG | |||||
R: GGATCAGGAAAAGGACATTTTAC | 48 | 421 |
Minimum inhibitory concentration (MIC) values of, and resistance of S. agalactiae isolates to, β-lactams, sulfonamides and tetracyclines
Isolate no. | MIC (μg/mL) |
||||||||
---|---|---|---|---|---|---|---|---|---|
PEN | A/C | AMP | CET | OXA | SMZ | SXT | TE | DOX | |
SH07 | ≤0.125 (S3) | 1/0.5 (R) | ≤0.125 (S) | 32 (R) | 1 (S) | 4 (S) | 0.5/9.5 (S) | 4 (S) | 4 (S) |
SH07-2 | 4 (R) | ≤0.25/0.12 (S) | ≤0.125 (S) | 0.5 (S) | 16 (R) | 256 (I) | 0.25/4.8 (S) | 16 (R) | 2 (S) |
SH12 | ≤0.125 (S) | ≤0.25/0.12 (S) | 0.25 (I) | 0.5 (S) | 4 (R) | 8 (S) | 0.5/9.5 (S) | 32 (R) | 4 (S) |
SH33 | ≤0.125 (S) | ≤0.25/0.12 (S) | ≤0.125 (S) | 0.5 (S) | 16 (R) | 64 (S) | 0.5/9.5 (S) | 32 (R) | 0.5 (S) |
SH45 | ≤0.125 (S) | ≤0.25/0.12 (S) | ≤0.125 (S) | 1 (S) | 32 (R) | 64 (S) | 0.25/4.8 (S) | 64 (R) | 2 (S) |
HLJ008 | ≤0.125 (S) | ≤0.25/0.12 (S) | ≤0.125 (S) | 32 (R) | 32 (R) | 128 (S) | 0.25/4.8 (S) | 32 (R) | 2 (S) |
HLJ048-2 | 2 (R) | ≤0.25/0.12 (S) | ≤0.125 (S) | 1 (S) | 4 (R) | 2 (S) | 0.5/9.5 (S) | 16 (R) | 8 (I) |
HLJ030-3 | ≤0.125 (S) | ≤0.25/0.12 (S) | ≤0.125 (S) | 0.5 (S) | 0.5 (S) | 64 (S) | 0.5/9.5 (S) | 64 (R) | 4 (S) |
NM025 | ≤0.125 (S) | ≤0.25/0.12 (S) | ≤0.125 (S) | 1 (S) | 1 (S) | 64 (S) | 0.25/4.8 (S) | 32 (R) | 16 (R) |
HB016 | ≤0.125 (S) | ≤0.25/0.12 (S) | ≤0.125 (S) | 0.25 (S) | 16 (R) | 128 (S) | 0.5/9.5 (S) | 16 (R) | 4 (S) |
NM-2-72-4 | 8 (R) | ≤0.25/0.12 (S) | 2 (R) | 1 (S) | 16 (R) | 128 (S) | 0.25/4.8 (S) | 32 (R) | 32 (R) |
NM-2-034-3 | 8 (R) | 16/8 (R) | 4 (R) | 0.5 (S) | 4 (R) | 64 (S) | 2/38 (I) | 4 (S) | 4 (S) |
SH-2-46-1 | ≤0.125 (S) | ≤0.25/0.12 (S) | ≤0.125 (S) | 0.5 (S) | 32 (R) | 128 (S) | 0.25/4.8 (S) | 16 (R) | 4 (S) |
SH-2-14-2 | 2 (R) | 4/2 (R) | ≤0.125 (S) | 1 (S) | 16 (R) | 128 (S) | 0.25/4.8 (S) | 32 (R) | 8 (I) |
SD-2-009-2 | ≤0.125 (S) | 16/8 (R) | ≤0.125 (S) | 0.5 (S) | 4 (R) | 128 (S) | 0.25/4.8 (S) | 8 (I) | 4 (S) |
Drug resistance rate (%) (/15) | |||||||||
S | 66.67 (10) | 73.33 (11) | 80.00 (12) | 86.67 (13) | 20.00 (3) | 93.33 (14) | 93.33 (14) | 13.33 (2) | 73.33 (11) |
I | 0 (0) | 0 (0) | 6.67 (1) | 0 (0) | 0 (0) | 6.67 (1) | 6.67 (1) | 6.67 (1) | 13.33 (2) |
R | 33.33 (5) | 26.67 (4) | 13.33 (2) | 13.33 (2) | 80.00 (12) | 0 (0) | 0 (0) | 80.00 (12) | 13.33 (2) |
Logistic regression analysis of the relationship between antibiotics and virulence genes
Virulence gene | Penicillin | Cefoxitin | Oxacillin | Doxycycline | Gentamicin | Clindamycin | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
B | Exp(B) | P | B | Exp(B) | P | B | Exp(B) | P | B | Exp(B) | P | B | Exp(B) | P | B | Exp(B) | P | |
40.537 | 4.028 | 0.999 | 1.099 | 3.000 | 1.000 | −42.406 | 0.000 | 0.999 | 1.099 | 3.000 | 1.000 | −41.307 | 0.000 | 0.999 | −61.799 | 0.000 | 0.999 | |
−20.269 | 0.000 | 1.000 | −60.718 | 0.000 | 0.999 | 62.916 | 2.108 | 0.999 | 19.699 | 3.590 | 1.000 | 62.105 | 9.369 | 0.999 | −62.493 | 0.000 | 0.999 | |
0.000 | 1.000 | 1.000 | −19.411 | 0.000 | 0.999 | −21.896 | 0.000 | 0.999 | −19.411 | 0.000 | 0.999 | −19.411 | 0.000 | 0.999 | −0.693 | 0.500 | 0.744 | |
−0.934 | 0.393 | 1.000 | 42.406 | 2.610 | 0.999 | −84.812 | 0.000 | 0.999 | −38.011 | 0.000 | 1.000 | −80.417 | 0.000 | 0.999 | −81.880 | 0.000 | 0.999 | |
42.406 | 2.610 | 0.999 | −40.209 | 0.000 | 0.999 | 42.406 | 2.610 | 0.999 | 40.209 | 2.900 | 0.999 | 40.209 | 2.900 | 0.999 | 0.000 | 1.000 | 1.000 | |
21.203 | 1.615 | 1.000 | −19.411 | 0.000 | 1.000 | −21.896 | 0.000 | 1.000 | −19.411 | 0.000 | 1.000 | −19.411 | 0.000 | 1.000 | −42.412 | 0.000 | 0.999 | |
−41.472 | 0.000 | 1.000 | −1.099 | 0.333 | 1.000 | 42.406 | 2.610 | 1.000 | −1.099 | 0.333 | 1.000 | 41.307 | 8.699 | 1.000 | −20.080 | 0.000 | 1.000 | |
0.000 | 1.000 | 1.000 | −1.099 | 0.333 | 1.000 | 42.406 | 2.610 | 0.999 | −1.099 | 0.333 | 1.000 | −1.099 | 0.333 | 1.000 | 21.203 | 1.615 | 1.000 |
16 kinds of antibacterial drugs and their classification
Drug category | Antibacterial drugs |
---|---|
penicillin | |
ampicillin | |
β-lactams | amoxicillin / clavulanic acid |
oxacillin | |
cefoxitin | |
Macrolides | erythromycin |
Lincosamides | clindamycin |
Aminoglycosides | gentamicin |
Tetracyclines | doxycycline tetracycline |
Chloramphenicols | florfenicol |
Ansamycins | rifampicin |
Glycopeptides | vancomycin |
Quinolones | ciprofloxacin |
Sulfonamides | sulfisoxazole |
sulfamethoxazole |
The drug resistance patterns and gene expression profiles of S. agalactiae
Isolate no. | Drug resistance pattern | Resistant gene | Virulence gene |
---|---|---|---|
SH07 | (A/C)/CET/ERY | ||
SH07-2 | PEN/OXA/TE/ERY/CLI/FFC | ||
SH12 | OXA/TE/ERY/CLI/GM | ||
SH33 | OXA/TE/ERY/CLI/GM | ||
SH45 | OXA/TE/ERY/CLI | ||
HLJ008 | CET/OXA/TE/ERY/CLI | ||
HLJ030-3 | TE/CLI/FFC | ||
NM025 | TE/DOX/ERY | ||
HB016 | OXA/TE/ERY/CLI/GM | ||
SH-2-46-1 | OXA/TE/ERY |
Primer sequence and reaction conditions of the virulence gene of S. agalactiae (13, 22, 23)
Virulence factor | Virulence gene | Primer sequence (5′–3′) | Annealing temperature (°C) | PCR size product (bp) |
---|---|---|---|---|
F: CATTGCGTAGTCACCTCCC | ||||
β-haemolysin/cytolysis | R: GGGTTTCCACAGTTGCTTGA | 54 | 399 | |
F: TAACAGTTATGATACTTCACAGAC ⎕ | ||||
αC protein | R: ACGACTTTCTTCCGTCCACTTAGG | 51 | 535 | |
F: CCAAGACTTCAGCCACAAGG | ||||
C5a peptidase | R: CAATTCCAGCCAATAGCAGC | 57 | 591 | |
F: ACCGTCTGAAATGATGTGG | ||||
Laminin binding protein | R: GATTGACGTTGTCTTCTGC | 51 | 572 | |
Glutamine synthetase | F: ACGTATGAACAGAGTTGGCTATAA | 52 | 471 | |
R: TCCTCTGATAATTGCATTCCAC | ||||
CAMP factor | F: ATGGGATTTGGGATAACTAAGCTAG | 52 | 193 | |
R: AGCGTGTATTCCAGATTTCCTTAT | ||||
Hyaluronidase | F: ACAAATGGAACGACGTGACTAT | 52 | 346 | |
R: CACCAATTGGCAGAGCCT | ||||
F: AAGCAACTAGAAGAGGAAGC | ||||
βC protein | R: TTCTGCTCTGGTGTTTTAGG | 53 | 479 | |
Bacterial immunogenic | F: AACCAGAAGCCAAGCCAGCAACC | 58 | 127 | |
adhesive | R: AGTGGACTTGCGGCTTCACCC | |||
F: CGGGATTGATCTAAGTCGCT | ||||
Invasion-associated gene | R: CCATCAACATCAGTCGCTAA | 53 | 459 | |
F: AGAGCCAAGTAGGTCAACTTATAG | ||||
Fibrin binding protein B | R: TTCATTGCGTCTCAAACCG | 54 | 290 |
Minimum inhibitory concentration (MIC) values of, and resistance of S. agalactiae isolates to, a macrolide, a lincosamide, an aminoglycoside, a quinolone, a chloramphenicol, an ansamycin, and a glycopeptide
Isolate no. | MIC (μg/mL) |
||||||
---|---|---|---|---|---|---|---|
ERY | CLI | GM | CIP | FFC | RIF | VAN | |
SH07 | 16 (R) | 0.25 (S) | 4 (S) | 0.5 (S) | 2 (S) | 0.5 (S) | 0.5 (S) |
SH07-2 | 16 (R) | 4 (R) | 4 (S) | 0.5 (S) | 16 (R) | 0.125 (S) | 0.5 (S) |
SH12 | 32 (R) | 8 (R) | 16 (R) | 0.5 (S) | 4 (S) | 0.5 (S) | 0.5 (S) |
SH33 | 16 (R) | 8 (R) | 16 (R) | 0.5 (S) | 8 (I) | 0.5 (S) | 0.5 (S) |
SH45 | 64 (R) | 8 (R) | 2 (S) | 2 (I) | 8 (I) | 0.5 (S) | 0.5 (S) |
HLJ008 | 16 (R) | 4 (R) | 4 (S) | 0.5 (S) | 4 (S) | 0.5 (S) | 0.5 (S) |
HLJ048-2 | 16 (R) | 16 (R) | 8 (I) | 0.5 (S) | 4 (S) | 1 (S) | 0.5 (S) |
HLJ030-3 | 0.5 (S) | 16 (R) | 2 (S) | 0.5 (S) | 16 (R) | 0.5 (S) | 0.5 (S) |
NM025 | 16 (R) | 0.5 (S) | 1 (S) | 0.5 (S) | 8 (I) | 0.5 (S) | 0.5 (S) |
HB016 | 16 (R) | 4 (R) | 16 (R) | 0.5 (S) | 4 (S) | 0.5 (S) | 0.5 (S) |
NM-2-72-4 | 2 (I) | 0.5 (S) | 32 (R) | 0.5 (S) | 16 (R) | 0.5 (S) | 0.5 (S) |
NM-2-034-3 | 0.5 (S) | 16 (R) | 4 (S) | 4 (R) | 16 (R) | 0.5 (S) | 0.5 (S) |
SH-2-46-1 | 16 (R) | 0.5 (S) | 4 (S) | 0.5 (S) | 4 (S) | 0.5 (S) | 0.5 (S) |
SH-2-14-2 | 16 (R) | 16 (R) | 4 (S) | 4 (R) | 8 (I) | 0.5 (S) | 0.5 (S) |
SD-2-009-2 | 32 (R) | 0.5 (S) | 16 (R) | 4 (R) | 16 (R) | 0.5 (S) | 0.5 (S) |
Drug resistance rate (%) (/15) | |||||||
S | 13.33 (2) | 33.33 (5) | 60.00 (9) | 73.33 (11) | 40.00 (6) | 100 (15) | 100 (15) |
I | 6.67 (1) | 0 (0) | 6.67 (1) | 6.67 (1) | 26.67 (4) | 0 (0) | 0 (0) |
R | 80.00 (12) | 66.67 (10) | 33.33 (5) | 20.00 (3) | 33.33 (5) | 0 (0) | 0 (0) |