Laimaphelenchus africanus n. sp. (Tylenchomorpha: Aphelenchoididae) from South Africa, a morphological and molecular phylogenetic study, with an update to the diagnostics of the genus

Abolafia, J. 2015. A low-cost technique to manufacture a container to process meiofauna for scanning electron microscopy. Microscopy Research and Technique 78:771–776, doi: 10.1002/jemt.22538. Abolafia J. 2015 . A low-cost technique to manufacture a container to process meiofauna for scanning electron microscopy . Microscopy Research and Technique 78 : 771 – 776 , doi: 10.1002/jemt.22538 . 26178782 Open DOISearch in Google Scholar

Aliramaji, F., Pourjam, E., Álvarez-Ortega, S., Jahanshahi Afshar, F. and Pedram, M. 2018. Description of Aphelenchoides giblindavisi n. sp. (Nematoda: Aphelenchoididae), and proposal for a new combination. Journal of Nematology 50:437–452, doi: 10.21307/jofnem-2018-035. Aliramaji F. Pourjam E. Álvarez-Ortega S. Jahanshahi Afshar F. and Pedram M. 2018 . Description of Aphelenchoides giblindavisi n. sp. (Nematoda: Aphelenchoididae), and proposal for a new combination . Journal of Nematology 50 : 437 – 452 , doi: 10.21307/jofnem-2018-035 . 690930930451426 Open DOISearch in Google Scholar

Andrássy, I. 2007. Free-living nematodes of Hungary Pedozoologica Hungarica No. 4, Hungarian Natural History Museum, Budapest. Andrássy I. 2007 . Free-living nematodes of Hungary Pedozoologica Hungarica No. 4, Hungarian Natural History Museum , Budapest . Search in Google Scholar

Asghari, R., Pourjam, E., Heydari, R. and Zhao, Z. Q. 2012. Laimaphelenchus persicus n. sp. (Nematoda: Aphelenchoididae) from Iran. Zootaxa 3325:59–67, doi: 10.11646/zootaxa.3915.4.9. Asghari R. Pourjam E. Heydari R. and Zhao Z. Q. 2012 . Laimaphelenchus persicus n. sp. (Nematoda: Aphelenchoididae) from Iran . Zootaxa 3325 : 59 – 67 , doi: 10.11646/zootaxa.3915.4.9 . 25662146 Open DOISearch in Google Scholar

Bajaj, H. K. and Walia, K. K. 2000. A new species of Laimaphelenchus Fuchs, 1937 (Nematoda: Aphelenchina) from Kalesar forest, Haryana, India. Indian Journal of Nematology 30:88–90. Bajaj H. K. and Walia K. K. 2000 . A new species of Laimaphelenchus Fuchs, 1937 (Nematoda: Aphelenchina) from Kalesar forest, Haryana, India . Indian Journal of Nematology 30 : 88 – 90 . Search in Google Scholar

Carta, L. K., Li, S., Skantar, A. M. and Newcombe, G. 2016. Morphological and molecular characterization of two Aphelenchoides endophytic in poplar leaves. Journal of Nematology 48:28–33. Carta L. K. Li S. Skantar A. M. and Newcombe G. 2016 . Morphological and molecular characterization of two Aphelenchoides endophytic in poplar leaves . Journal of Nematology 48 : 28 – 33 . 10.21307/jofnem-2017-006485961527168650 Search in Google Scholar

De Grisse, A. T. 1969. Redescription ou modifications de quelques techniques utilisées dans l’étude des nematodes phytoparasitaires Vol. 34, Mededelingen Rijksuniversiteit Faculteit Landbouwwetenschappen. Gent 34:351–69. De Grisse A. T. 1969 . Redescription ou modifications de quelques techniques utilisées dans l’étude des nematodes phytoparasitaires Vol. 34, Mededelingen Rijksuniversiteit Faculteit Landbouwwetenschappen . Gent 34 : 351 – 69 . Search in Google Scholar

Doucet, E. M. 1992. A new species of the genus Laimaphelenchus Fuchs, 1937 (Nemata: Aphelenchina). Fundamental and Applied Nematology 15:1–6. Doucet E. M. 1992 . A new species of the genus Laimaphelenchus Fuchs, 1937 (Nemata: Aphelenchina) . Fundamental and Applied Nematology 15 : 1 – 6 . Search in Google Scholar

Edgar, R. C. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research 32:1792–1797, doi: 10.1093/nar/gkh340. Edgar R. C. 2004 . MUSCLE: multiple sequence alignment with high accuracy and high throughput . Nucleic Acids Research 32 : 1792 – 1797 , doi: 10.1093/nar/gkh340 . 39033715034147 Open DOISearch in Google Scholar

Elmiligy, I. and Geraert, E. 1972. Laimaphelenchus deconincki n. sp. (Nematoda: Tylenchida). Biologisch Jaarboek 39:145–149. Elmiligy I. and Geraert E. 1972 . Laimaphelenchus deconincki n. sp. (Nematoda: Tylenchida) . Biologisch Jaarboek 39 : 145 – 149 . Search in Google Scholar

Filipjev, I. N. and Schuurmans Stekhoven, J. H. Jr 1941. A manual of agricultural helminthology E. J. Brill, Leiden, 878pp. Filipjev I. N. and Schuurmans Stekhoven J. H. Jr 1941 . A manual of agricultural helminthology E. J. Brill , Leiden , 878 pp. Search in Google Scholar

Fischer, M. 1894. Ubereine Clematis-Krankheit. Bericht us dem Physiolischen Laboratorium des Landwirthschaftlichen. Instituts der Universitat Halle 3:1–11. Fischer M. 1894 . Ubereine Clematis-Krankheit. Bericht us dem Physiolischen Laboratorium des Landwirthschaftlichen . Instituts der Universitat Halle 3 : 1 – 11 . Search in Google Scholar

Fuchs, A. G. 1931. Seinura gen. nov. Zoologischer Anzeiger 94:226–228. Fuchs A. G. 1931 . Seinura gen. nov . Zoologischer Anzeiger 94 : 226 – 228 . Search in Google Scholar

Fuchs, A. G. 1937. Neue parasitische und halbparasitische Nematoden bei Borkenkäfern und einige andere Nematoden. I. Teil. Zoologische Jahrbücher, Abteilung für Systematik, Ökologie und Geographie der Tiere 70:291–380. Fuchs A. G. 1937 . Neue parasitische und halbparasitische Nematoden bei Borkenkäfern und einige andere Nematoden. I . Teil. Zoologische Jahrbücher, Abteilung für Systematik, Ökologie und Geographie der Tiere 70 : 291 – 380 . Search in Google Scholar

Gu, J., Maria, M., Fang, Y., Chen, X. and Liu, L. 2020a. Molecular and morphological characterisation of Laimaphelenchus spiflatus n. sp. (Nematoda: Aphelenchoididae) from China. Nematology 22:843–853, doi: org/10.1163/15685411-00003344. Gu J. Maria M. Fang Y. Chen X. and Liu L. 2020a . Molecular and morphological characterisation of Laimaphelenchus spiflatus n. sp. (Nematoda: Aphelenchoididae) from China . Nematology 22 : 843 – 853 , doi: org/10.1163/15685411-00003344. 10.1163/15685411-00003344 Search in Google Scholar

Gu, J., Maria, M., Fang, Y., Liu, L., Bian, Y. and Chen, X. 2020b. Description of Laimaphelenchus sinensis n. sp. (Nematoda: Aphelenchoididae) from declining Chinese pine, Pinus tabuliformis in Beijing, China. Journal of Nematology 52, doi: 10.21307/jofnem-2020-019. Gu J. Maria M. Fang Y. Liu L. Bian Y. and Chen X. 2020b . Description of Laimaphelenchus sinensis n. sp. (Nematoda: Aphelenchoididae) from declining Chinese pine, Pinus tabuliformis in Beijing, China . Journal of Nematology 52 , doi: 10.21307/jofnem-2020-019 . 726603832180385 Open DOISearch in Google Scholar

Hunt, D. J. 1993. Aphelenchida, longidoridae and trichodoridae: their systematics and bionomics CAB International Wallingford, Wallingford City, pp. 1–162. Hunt D. J. 1993 . Aphelenchida, longidoridae and trichodoridae: their systematics and bionomics CAB International Wallingford , Wallingford City , pp. 1 – 162 . Search in Google Scholar

Hunt, D. J. 2008. A checklist of the Aphelenchoidea (Nematoda: Tylenchina). Journal of Nematode Morphology and Systematics 10:99–135. Hunt D. J. 2008 . A checklist of the Aphelenchoidea (Nematoda: Tylenchina) . Journal of Nematode Morphology and Systematics 10 : 99 – 135 . Search in Google Scholar

Huson, D. H. and Scornavacca, C. 2012. Dendroscope 3: an interactive tool for rooted phylogenetic trees and networks. Systematic Biology 61:1061–1067, doi: 10.1093/sysbio/sys062. Huson D. H. and Scornavacca C. 2012 . Dendroscope 3: an interactive tool for rooted phylogenetic trees and networks . Systematic Biology 61 : 1061 – 1067 , doi: 10.1093/sysbio/sys062 . 22780991 Open DOISearch in Google Scholar

Kanzaki, N. and Giblin-Davis, R. 2012. “Aphelenchoidea”, In Manzanilla-Lopez, R. and Marban-Mendoza, N. (Eds), Practical Plant Nematology Biblioteca Basica de Agricultura, Guadalajara, Mexico, pp. 161–208. Kanzaki N. and Giblin-Davis R. 2012 . “ Aphelenchoidea ”, In Manzanilla-Lopez R. and Marban-Mendoza N. (Eds), Practical Plant Nematology Biblioteca Basica de Agricultura , Guadalajara, Mexico , pp. 161 – 208 . Search in Google Scholar

Kanzaki, N., Shokoohi, E., Fourie, H., Swart, A., Muller, L. and Giblin-Davis, R. M. 2018. “On the morphology and phylogeny of Robustodorus Andrássy, 2007 and two ‘Aphelenchoides’ species (Nematoda: Aphelenchoidinae)”, Nematology 20:601–615, doi: 10.1163/15685411-00003164. Kanzaki N. Shokoohi E. Fourie H. Swart A. Muller L. and Giblin-Davis R. M. 2018 . “ On the morphology and phylogeny of Robustodorus Andrássy, 2007 and two ‘Aphelenchoides’ species (Nematoda: Aphelenchoidinae) ”, Nematology 20 : 601 – 615 , doi: 10.1163/15685411-00003164 . Open DOISearch in Google Scholar

Larget, B. and Simon, D. L. 1999. Markov Chain Monte Carlo algorithms for the Bayesian analysis of phylogenetic trees. Molecular Biology and Evolution 16:750–9, doi: 10.1093/oxfordjournals.molbev.a026160. Larget B. and Simon D. L. 1999 . Markov Chain Monte Carlo algorithms for the Bayesian analysis of phylogenetic trees . Molecular Biology and Evolution 16 : 750 – 9 , doi: 10.1093/oxfordjournals.molbev.a026160 . 10.1093/oxfordjournals.molbev.a026160 Search in Google Scholar

Maleita, C. M. N., Costa, S. R. and Abrantes, I. 2018. Laimaphelenchus suberensis sp. nov. associated with Quercus suber in Portugal. European Journal of Plant Pathology 150:747–758, doi: org/10.1007/s10658-017-1324-4. Maleita C. M. N. Costa S. R. and Abrantes I. 2018 . Laimaphelenchus suberensis sp. nov. associated with Quercus suber in Portugal . European Journal of Plant Pathology 150 : 747 – 758 , doi: org/10.1007/s10658-017-1324-4. 10.1007/s10658-017-1324-4 Search in Google Scholar

Maslen, N. R. 1979. Six new nematode species from the maritime Antarctic. Nematologica 25:288308. Maslen N. R. 1979 . Six new nematode species from the maritime Antarctic . Nematologica 25 : 288308 . 10.1163/187529279X00028 Search in Google Scholar

Massey, C. L. 1966. The nematode parasites and associates of Dendroctonus adjunctus (Coleoptera: Scolytidae) in New Mexico. Annals of the Entomological Society of America 59:424–40. Massey C. L. 1966 . The nematode parasites and associates of Dendroctonus adjunctus (Coleoptera: Scolytidae) in New Mexico . Annals of the Entomological Society of America 59 : 424 – 40 . 10.1093/aesa/59.3.424 Search in Google Scholar

Massey, C. L. 1974. Biology and taxonomy of nematode parasites and associates of bark beetles in the United States Agriculture Handbook No. 446, USDA, Forest Service, Washington, DC, 233pp. Massey C. L. 1974 . Biology and taxonomy of nematode parasites and associates of bark beetles in the United States Agriculture Handbook No. 446, USDA, Forest Service , Washington, DC , 233 pp. Search in Google Scholar

Mortazavi, P. and Pedram, M. 2020. Description of Aphelenchoides hamospiculatus n. sp. (Aphelenchoidea: Aphelenchoididae) from Golestan province, north Iran. Nematology 23:201–213, doi: 10.1163/15685411-bja10038. Mortazavi P. and Pedram M. 2020 . Description of Aphelenchoides hamospiculatus n. sp. (Aphelenchoidea: Aphelenchoididae) from Golestan province, north Iran . Nematology 23 : 201 – 213 , doi: 10.1163/15685411-bja10038 . Open DOISearch in Google Scholar

Negi, S., Kalia, D. C., Walia, K. K. and Bajaj, H. K. 2009. New species of Aphelenchoides Fischer and Laimaphelenchus Fuchs (Nematoda: Aphelenchida) from pine twigs, Himachal Pradesh, India. Indian Journal of Nematology 39:192–7. Negi S. Kalia D. C. Walia K. K. and Bajaj H. K. 2009 . New species of Aphelenchoides Fischer and Laimaphelenchus Fuchs (Nematoda: Aphelenchida) from pine twigs, Himachal Pradesh, India . Indian Journal of Nematology 39 : 192 – 7 . Search in Google Scholar

Nunn, G. B. 1992. Nematode Molecular Evolution. An Investigation of Evolutionary Patterns among Nematodes based on DNA Sequences University of Nottingham, Nottingham. Nunn G. B. 1992 . Nematode Molecular Evolution. An Investigation of Evolutionary Patterns among Nematodes based on DNA Sequences University of Nottingham , Nottingham . Search in Google Scholar

Nylander, J. A. A. 2004. MrModeltest v2. Program distributed by the author. Uppsala University, Evolutionary Biology Centre, Uppsala, available at: https://github.com/nylander/MrModeltest2. Nylander J. A. A. 2004 . MrModeltest v2. Program distributed by the author. Uppsala University, Evolutionary Biology Centre, Uppsala, available at: https://github.com/nylander/MrModeltest2. Search in Google Scholar

Oro, V. 2015. Description of Laimaphelenchus belgradiensis sp. nov. (Nematoda: Aphelenchoididae) and its phylogenetic and systematic position within Aphelenchoidoidea. European Journal of Plant Pathology 142:13–23, doi: 10.1007/s10658-014-0585-4. Oro V. 2015 . Description of Laimaphelenchus belgradiensis sp. nov. (Nematoda: Aphelenchoididae) and its phylogenetic and systematic position within Aphelenchoidoidea . European Journal of Plant Pathology 142 : 13 – 23 , doi: 10.1007/s10658-014-0585-4 . Open DOISearch in Google Scholar

Pedram, M., Pourhashemi, M., Hosseinzadeh, J. and Koolivand, D. 2018. “Comments on taxonomic status and host association of some Laimaphelenchus spp. (Rhabditida: Aphelenchoidea)”, Nematology 20:483–489, doi: 10.1163/15685411-00003153. Pedram M. Pourhashemi M. Hosseinzadeh J. and Koolivand D. 2018 . “ Comments on taxonomic status and host association of some Laimaphelenchus spp. (Rhabditida: Aphelenchoidea) ”, Nematology 20 : 483 – 489 , doi: 10.1163/15685411-00003153 . Open DOISearch in Google Scholar

Pedram, M. 2019. Two Ektaphelenchinae Paramonov, 1964 (Nematoda: Rhabditida) from Iran have tripartite stylet, with similar observations in other species. PLoS ONE 14:e0215731, doi: 10.1371/journal.pone.0215731. Pedram M. 2019 . Two Ektaphelenchinae Paramonov, 1964 (Nematoda: Rhabditida) from Iran have tripartite stylet, with similar observations in other species . PLoS ONE 14 : e0215731 , doi: 10.1371/journal.pone.0215731 . 651306031083668 Open DOISearch in Google Scholar

Pedram, M., Gu, J., Liu, L. and Guo, K. 2020. Description of Cryptaphelenchus paravaricaudatus n. sp. (Aphelenchoidea: Ektaphelenchinae) from Pinus massoniana Lamb. in China. Nematology 22:723–732, doi: 10.1163/15685411-00003335. Pedram M. Gu J. Liu L. and Guo K. 2020 . Description of Cryptaphelenchus paravaricaudatus n. sp. (Aphelenchoidea: Ektaphelenchinae) from Pinus massoniana Lamb. in China . Nematology 22 : 723 – 732 , doi: 10.1163/15685411-00003335 . Open DOISearch in Google Scholar

Rashidifard, M., Marais, M., Daneel, M. S., Mienie, C. M. S. and Fourie, H. 2019. Molecular characterisation of Meloidogyne enterolobii and other Meloidogyne spp. from South Africa. Tropical Plant Pathology 44:213–24, doi: 10.1007/s40858-019-00281-4. Rashidifard M. Marais M. Daneel M. S. Mienie C. M. S. and Fourie H. 2019 . Molecular characterisation of Meloidogyne enterolobii and other Meloidogyne spp. from South Africa . Tropical Plant Pathology 44 : 213 – 24 , doi: 10.1007/s40858-019-00281-4 . Open DOISearch in Google Scholar

Ronquist, F. and Huelsenbeck, J. P. 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572–4, doi: 10.1093/bioinformatics/btg180. Ronquist F. and Huelsenbeck J. P. 2003 . MrBayes 3: Bayesian phylogenetic inference under mixed models . Bioinformatics 19 : 1572 – 4 , doi: 10.1093/bioinformatics/btg180 . 12912839 Open DOISearch in Google Scholar

Skarbilovich, T. S. 1947. [Revision of the systematics of the nematode family Anguillulinidae Baylis and Daubney, 1926]. Doklady Akademii Nauk SSR 57:307–308, (In Russian). Skarbilovich T. S. 1947 . [Revision of the systematics of the nematode family Anguillulinidae Baylis and Daubney, 1926] . Doklady Akademii Nauk SSR 57 : 307 – 308 , (In Russian) . Search in Google Scholar

Song, Y., Liu, R., Jiang, Y., Zhou, L., Tan, J., Sun, S. and Chen, F. 2020. Molecular and morphological characterization of Laimaphelenchus liaoningensis n. sp. (Nematoda: Aphelenchoididae) in China. Journal of Nanjing Forestry University (Natural Sciences Edition) 44:93–101, doi: 10.3969/j.issn.1000-2006.201911059. Song Y. Liu R. Jiang Y. Zhou L. Tan J. Sun S. and Chen F. 2020 . Molecular and morphological characterization of Laimaphelenchus liaoningensis n. sp. (Nematoda: Aphelenchoididae) in China . Journal of Nanjing Forestry University (Natural Sciences Edition) 44 : 93 – 101 , doi: 10.3969/j.issn.1000-2006.201911059 . Open DOISearch in Google Scholar

Steiner, G. 1914. Freilebende Nematoden aus der Schweiz. 2. Teil einer vorläufigen Mitteilung. Archiv für Hydrobiologie und Planktonkunde 9:420–438. Steiner G. 1914 . Freilebende Nematoden aus der Schweiz. 2. Teil einer vorläufigen Mitteilung . Archiv für Hydrobiologie und Planktonkunde 9 : 420 – 438 . Search in Google Scholar

Swart, A. 1997. Description of Laimaphelenchus patulus sp. n. (Nematoda: Aphelenchoididae) from Pinus pinaster in South Africa. African Plant Protection 3:23–8. Swart A. 1997 . Description of Laimaphelenchus patulus sp. n. (Nematoda: Aphelenchoididae) from Pinus pinaster in South Africa . African Plant Protection 3 : 23 – 8 . Search in Google Scholar

Tamura, K., Stecher, G., Peterson, D., Filipski, A. and Kumar, S. 2013. MEGA6: molecular evolutionary genetics analysis version6.0. Molecular Biology and Evolution 30:2725–2729, doi: 10.1093/molbev/mst197. Tamura K. Stecher G. Peterson D. Filipski A. and Kumar S. 2013 . MEGA6: molecular evolutionary genetics analysis version6.0 . Molecular Biology and Evolution 30 : 2725 – 2729 , doi: 10.1093/molbev/mst197 . 384031224132122 Open DOISearch in Google Scholar

Truskova, G. M. and Eroshenko, A. S. 1977. [The nematode fauna of herbaceous and ligneous plants in the pine plantations of the Primor’yal]. Trudy Biologo-Pochvennogo Instituta 47:35–49. Truskova G. M. and Eroshenko A. S. 1977 . [The nematode fauna of herbaceous and ligneous plants in the pine plantations of the Primor’yal] . Trudy Biologo-Pochvennogo Instituta 47 : 35 – 49 . Search in Google Scholar

Whitehead, A. G. and Hemming, J. R. 1965. A comparison of some quantitative methods for extracting small vermiform nematodes from soil. Annals of Applied Biology 55:25–38. Whitehead A. G. and Hemming J. R. 1965 . A comparison of some quantitative methods for extracting small vermiform nematodes from soil . Annals of Applied Biology 55 : 25 – 38 . 10.1111/j.1744-7348.1965.tb07864.x Search in Google Scholar

Zhao, Z. Q., Davies, K. A., Riley, I. T. and Nobbs, J. M. 2006a. Laimaphelenchus australis sp. nov. (Nematoda: Aphelenchina) from exotic pines, Pinus radiata and P. pinaster in Australia. Zootaxa 1248:35–44, doi: 10.5281/zenodo.172959. Zhao Z. Q. Davies K. A. Riley I. T. and Nobbs J. M. 2006a . Laimaphelenchus australis sp. nov. (Nematoda: Aphelenchina) from exotic pines, Pinus radiata and P. pinaster in Australia . Zootaxa 1248 : 35 – 44 , doi: 10.5281/zenodo.172959 . Open DOISearch in Google Scholar

Zhao, Z. Q., Davies, K. A., Riley, I. T. and Nobbs, J. M. 2006b. Laimaphelenchus preissii sp. nov. (Nematoda: Aphelenchina) from native pine Callitris preissii in South Australia. Transactions of the Royal Society of South Australia 130:10–16, doi: 10.1080/3721426.2006.10887044. Zhao Z. Q. Davies K. A. Riley I. T. and Nobbs J. M. 2006b . Laimaphelenchus preissii sp. nov. (Nematoda: Aphelenchina) from native pine Callitris preissii in South Australia . Transactions of the Royal Society of South Australia 130 : 10 – 16 , doi: 10.1080/3721426.2006.10887044 . Open DOISearch in Google Scholar