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Diversity, Virulence Factors, and Antifungal Susceptibility Patterns of Pathogenic and Opportunistic Yeast Species in Rock Pigeon (Columba livia) Fecal Droppings in Western Saudi Arabia

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Fig. 1.

Neighbor-joining tree showing the estimated phylogenetic relationship of the all fungi and yeasts strains (shown in blue) and other closely related strains. Bootstrap values out of 100 are given at the nodes based on the sequence of ITS region (amplify the ITS1-5.8S-ITS2 fragment). Aspergillus flavus (KU052567.1) was used as out group.
Neighbor-joining tree showing the estimated phylogenetic relationship of the all fungi and yeasts strains (shown in blue) and other closely related strains. Bootstrap values out of 100 are given at the nodes based on the sequence of ITS region (amplify the ITS1-5.8S-ITS2 fragment). Aspergillus flavus (KU052567.1) was used as out group.

Fig. 2.

Neighbor-joining tree showing the estimated phylogenetic relationship of the Cryptococcus strains (shown in blue) and other closely related strains. Bootstrap values out of 100 are given at the nodes, based on the sequence of ITS region (amplify the ITS1-5.8S-ITS2 fragment). Saccharomyces cerevisiae strain AUMC 10235 (KX029125.1) as out group.
Neighbor-joining tree showing the estimated phylogenetic relationship of the Cryptococcus strains (shown in blue) and other closely related strains. Bootstrap values out of 100 are given at the nodes, based on the sequence of ITS region (amplify the ITS1-5.8S-ITS2 fragment). Saccharomyces cerevisiae strain AUMC 10235 (KX029125.1) as out group.

Fig. 3.

Ethidium bromide stained agarose gel electrophoresis resolving the PCR Screening amplification fragments for the presence of CAP1 panel A lanes: 2 (Y33), 3 (Y38) (~ 730 bp), CAP59 panel B lanes 2 (Y1), 3 (Y3), 4 (Y21), 5 (Y5), 6 (Y20) and 7 (Y9) (~ 520 bp) and PLB1 Panel C lanes: 2 (Y44) and 3 (Y46) (~ 853 bp). Lane 1: 100 bp marker and lane 4 panel C: 1 Kbp ladder. Y1, Y5,Y9, Y20, Y33, Y38, Y46 = Cryptococcus neoformans Y44 = Saccharomyces cerevisiae Y3, Y21 = Cryptococcus gattii
Ethidium bromide stained agarose gel electrophoresis resolving the PCR Screening amplification fragments for the presence of CAP1 panel A lanes: 2 (Y33), 3 (Y38) (~ 730 bp), CAP59 panel B lanes 2 (Y1), 3 (Y3), 4 (Y21), 5 (Y5), 6 (Y20) and 7 (Y9) (~ 520 bp) and PLB1 Panel C lanes: 2 (Y44) and 3 (Y46) (~ 853 bp). Lane 1: 100 bp marker and lane 4 panel C: 1 Kbp ladder. Y1, Y5,Y9, Y20, Y33, Y38, Y46 = Cryptococcus neoformans Y44 = Saccharomyces cerevisiae Y3, Y21 = Cryptococcus gattii

Molecular identification and phenotypical traits of yeast isolates in pigeon feces.

Yeast isolates ITS IDNumber of isolatesPhenotypic traits
Nit*MelaninUreasePseudomy*CapsuleGlu*†Lact*†Sucr*†37°C‡
Cryptococcus neoformans11++++++
Cryptococcus albidus5++++++++
Cryptococcus gattii2++++++
Cryptococcus liquefaciens1+++++++
Saccharomyces cerevisiae5++
Millerozyma farinosa3+++
Rhodotorula mucilaginosa5++++
Rhodotorula glutinis2+++
Meyerozyma guilliermondii4+++
Candida glabrata1++
Cyberlindnera fabianii3++++
Rhodosporidium paludigenum2++++
Lodderomyces elongisporus2++++

Detection of virulence factors-encoding genes in yeast species isolated from pigeon feces.

Yeast isolates ITS IDTotal number of isolatesVirulence factors-encoding genes
CAP1CAP59PLB
Cryptococcus neoformans116511
Cryptococcus albidus55
Cryptococcus gattii222
Cryptococcus liquefaciens1
Saccharomyces cerevisiae5NDND5
Millerozyma farinosa3NDND
Rhodotorula mucilaginosa5NDND
Rhodotorula glutinis2NDND
Meyerozyma guilliermondii4NDND
Candida glabrata1NDND1
Cyberlindnera fabianii3NDND
Rhodosporidium paludigenum2NDND
Lodderomyces elongisporus2NDND

Antifungal susceptibility patterns of yeast species isolated from pigeon feces (diameter zone, mm).

Yeast speciesNumber of isolatesAntifungal agents (A)‡
Ciclopirox-OlamineClotrimazoleFluconazoleNystatin
Cryptococcus neoformans1129 (S)41 (S)51 (S)22 (S)
Cryptococcus albidus533 (S)46 (S)51 (S)22 (S)
Cryptococcus gattii231 (S)46 (S)51 (S)28 (S)
Cryptococcus liquefaciens128 (S)50 (S)56 (S)25 (S)
Saccharomyces cerevisiae554 (S)55 (S)60 (S)35 (S)
Millerozyma farinosa341 (S)45.3 (S)57 (S)25 (S)
Rhodotorula mucilaginosa542 (S)51 (S)60 (S)35 (S)
Rhodotorula glutinis258 (S)60 (S)56 (S)40 (S)
Meyerozyma guilliermondii456 (S)57.3 (S)53 (S)48 (S)
Candida glabrata133 (S)38 (S)48 (S)22 (S)
Cyberlindnera fabianii347 (S)45 (S)65 (S)51 (S)
Rhodosporidium paludigenum253 (S)50 (S)60 (S)44 (S)
Lodderomyces elongisporus251 (S)51 (S)58 (S)35 (S)
Candida albicans ATCC 90028127 (S)30 (S)39 (S)22 (S)
eISSN:
2544-4646
Lingua:
Inglese
Frequenza di pubblicazione:
4 volte all'anno
Argomenti della rivista:
Life Sciences, Microbiology and Virology