1. bookVolume 22 (2014): Edizione 1 (June 2014)
Dettagli della rivista
Prima pubblicazione
08 Oct 2013
Frequenza di pubblicazione
2 volte all'anno
Accesso libero

Phylogeny, Historical Biogeography and the Evolution of Migration in Accipitrid Birds of Prey (Aves: Accipitriformes)

Pubblicato online: 04 Dec 2014
Volume & Edizione: Volume 22 (2014) - Edizione 1 (June 2014)
Pagine: 15 - 35
Dettagli della rivista
Prima pubblicazione
08 Oct 2013
Frequenza di pubblicazione
2 volte all'anno

Alerstam, T. 1993. Bird migration. - Cambridge University Press, pp. 420 do Amaral, F. R., Sheldon, F. H., Gamauf, A., Haring, E., Riesing, M., Silveira, L. F. & Wajntal, A. 2009. Patterns and processes of diversification in a widespread and ecologically diverse avian group, the buteonine hawks (Aves, Accipitridae). - Molecular Phylogenetics and Evolution 53: 703-715. DOI: 10.1016/j.ympev.2009.07.02010.1016/j.ympev.2009.07.02019635577Search in Google Scholar

Bell, C. P. 2000. Process in the evolution of bird migration and pattern in avian ecogeography. - Journal of Avian Biology 31: 258-265. DOI: 10.1034/j.160 0048X.2000.310218.x Bell, C. P. 2005. The origin and development of bird migration: comments on Rappole and Jones, and an alternative evolutionary model. - Ardea 93: 115-123.Search in Google Scholar

Bell, C. P. 2011. Resource buffering and the evolution of bird migration. - Evolutionary Ecology 25: 91-106. DOI: 10.1007/s10682-010-9383-410.1007/s10682-010-9383-4Search in Google Scholar

Berthold, P. 2001. Bird migration: a general survey. - Oxford University Press, pp. 272Search in Google Scholar

Boyle, W. A. & Conway, C. J. 2007. Why migrate? A test of the evolutionary precursor hypothesis. - The American Naturalist 169: 344-359. DOI: 10.1086/51133510.1086/51133517294370Search in Google Scholar

Boyle, W. A., Conway, C. J. & Bronstein, J. L. 2011. Why do some, but not all, tropical birds migrate? A comparative study of diet breadth and fruit preference. - Evolutionary Ecology 25: 219-236. DOI: 10.1007/s10682-010-9403-410.1007/s10682-010-9403-4Search in Google Scholar

Breman, F. C., Jordaens, K., Sonet, G., Nagy, Z. T., Van Houdt, J. & Louette, M. 2013. DNA barcoReferences ding and evolutionary relationships in Accipiter Brisson, 1760 (Aves, Falconiformes: Accipitridae) with a focus on African and Eurasian representatives. - Journal of Ornithology 154: 265-287. DOI: 10.1007/s10336-012-0892-510.1007/s10336-012-0892-5Search in Google Scholar

Brown, J. W., Rest, J. S., García-Moreno, J., Sorenson, M. D. & Mindell, D. P. 2008. Strong mitochondrial DNA support for a Cretaceous origin of modern avian lineages. - BMC Biology 6: 6. DOI: 10.1186/1741-7007-6-610.1186/1741-7007-6-6226777218226223Search in Google Scholar

Bruderer, B. & Salewski, V. 2008. Evolution of bird migration in a biogeographical context. - Journal of Biogeography 35: 1951-1959. DOI: 10.1111/j.1365-2699.2008.01992.x Camacho, C. 2013. Tropical phenology in temperate regions: extended breeding season in a long-distance migrant. - The Condor 115: 830-837. DOI: 10.1525/cond.2013.12019210.1525/cond.2013.120192Search in Google Scholar

Castresana, J. 2000. Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. - Molecular Biology and Evolution 17: 540-552.10.1093/oxfordjournals.molbev.a02633410742046Search in Google Scholar

Charif, D. & Lobry, J. R. 2007. SeqinR 1.0-2: A contributed package to the R project for statistical computing devoted to biological sequences retrieval and analysis. - In: Bastolla, U., Porto, M., Roman, H. E. & Vendruscolo, M. (eds.) Structural approaches to sequence evolution. - Springer, Berlin, pp. 207-232.Search in Google Scholar

Cox, G. W. 1985. The evolution of avian migration systems between temperate and tropical regions of the New World. - The American Naturalist 126: 451-474.10.1086/284432Search in Google Scholar

Darriba, D., Taboada, D. L., Doallo, R. & Posada, D. 2012. jModelTest 2: more models, new heuristics and parallel computing. - Nature Methods 9: 772. DOI: 10.1038/nmeth.210910.1038/nmeth.2109459475622847109Search in Google Scholar

Drummond, A. J., Ho, S. Y., Phillips, M. J. & Rambaut, A. 2006. Relaxed phylogenetics and dating with confidence. - PLoS Biology 4: e88. DOI: 10.1371/ journal.pbio.004008810.1371/journal.pbio.0040088139535416683862Search in Google Scholar

Drummond, A. & Rambaut, A. 2007. BEAST: bayesian evolutionary analysis by sampling trees. - BMC Evolutionary Biology 7: 214. DOI: 10.1186/1471-2148-7-21410.1186/1471-2148-7-214224747617996036Search in Google Scholar

Dunning, J. B. 2008. CRC handbook of avian body masses. - CRC Press, Boca Raton Ericson, P. G. P., Anderson, C. L., Britton, T., Elzanowski, A., Johansson, U. S., Källersjö, M., Ohlson, J. I., Parsons, T. J., Zuccon, D. & Mayr. G. 2006. Diversification of Neoaves: integration of molecular sequence data and fossils. - Biology Letters 2: 543-547. DOI: 10.1098/rsbl.2006.052310.1098/rsbl.2006.0523183400317148284Search in Google Scholar

Ferguson-Lees, J. & Christie, D. A. 2001. Raptors of the World. - Houghton Mifflin Company, Boston Global Raptor Information Network. 2013. Species accounts. - Downloaded from http://www.globalraptors. org.Search in Google Scholar

Griffiths, C. S., Barrowclough, G. F., Groth, J. G. & Mertz. L. A. 2007. Phylogeny, diversity, and classification of the Accipitridae based on DNA sequences of the RAG-1 exon. - Journal of Avian Biology 38: 587-602. DOI: 10.1111/j.2007.0908-8857.03971.x 10.1111/j.0908-8857.2007.03971.xSearch in Google Scholar

Guindon, S. & Gascuel, O. 2003. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. - Systematic Biology 52: 696-704. DOI: 10.1080/1063515039023552010.1080/1063515039023552014530136Search in Google Scholar

Gwinner, E. 1990. Bird migration: physiology and ecophysiology. - Springer-Verlag, Berlin, pp. 43510.1007/978-3-642-74542-3Search in Google Scholar

Hackett, S. J., Kimball, R. T., Reddy, S., Bowie, R. C. K., Braun, E. L., Braun, M. J., Chojnowski, J. L., Cox, W. A., Han, K., Harshman, J., Huddleston, C. J., Marks, B. D., Miglia, K. J., Moore, W. S., Sheldon, F. H., Steadman, D. W., Witt, C. C. & Yuri, T. 2008. A phylogenomic study of birds reveals their evolutionary history. - Science 320: 1763-1768. DOI: 10.1126/science.115770410.1126/science.115770418583609Search in Google Scholar

Hadfield, J. D. & Nakagawa, S. 2010. General quantitative genetic methods for comparative biology: phylogenies, taxonomies, and multi-trait models for continuous and categorical characters. - Journal of Evolutionary Biology 23: 494-508. DOI: 10.1111/j.1420-9101.2009.01915.x 10.1111/j.1420-9101.2009.01915.x20070460Search in Google Scholar

Harrison, C. J. O. & Walker, C. A. 1976. Birds of the British upper Eocene. - Zoological Journal of the Linnean Society 59: 323-351. DOI: 10.1111/ j.1096-3642.1976.tb01017.x 10.1111/j.1096-3642.1976.tb01017.xSearch in Google Scholar

Helbig, A. J., Kocum, A., Seibold, I. & Braun, M. J. 2005. A multi-gene phylogeny of aquiline eagles (Aves: Accipitriformes) reveals extensive paraphyly at the genus level. - Molecular Phylogenetics and Evolution 35: 147-164. DOI: 10.1016/j. ympev.2004.10.003Search in Google Scholar

Jetz, W., Thomas, G. H., Joy, J. B., Hartmann, K. & Mooers, A. O. 2012. The global diversity of birds in space and time. - Nature 491: 444-448. DOI: 10.1038/nature1163110.1038/nature1163123123857Search in Google Scholar

Joseph, L., Lessa, E. P. & Christidis, L. 1999. Phylogeny and biogeography in the evolution of migration: shorebirds of the Charadrius complex. - Journal of Biogeography 26: 329-342. DOI: 10.1046/j.1365-2699.1999.00269.x 10.1046/j.1365-2699.1999.00269.xSearch in Google Scholar

Katoh, K., Kuma, K., Toh, H. & Miyata, T. 2005. MAFFT Version 5: improvement in accuracy of multiple sequence alignment. - Nucleic Acids Research 33: 511-518. DOI: 10.1093/nar/gki19810.1093/nar/gki19854834515661851Search in Google Scholar

Kendall, C., Virani, M. Z., Kirui, P., Thomsett, S. & Githiru, M. 2012. Mechanisms of coexistence in vultures: understanding the patterns of vulture abundance at carcasses in Masai Mara National Reserve, Kenya. - The Condor 114: 523-531.Search in Google Scholar

Kondo, B. & Omland, K. E. 2007. Ancestral state reconstruction of migration: multistate analysis reveals rapid changes in New World orioles (Icterus spp.). - The Auk 124: 410-419. DOI: 10.1642/0004-8038(2007)124[410:ASROMM] 2.0.CO;2Search in Google Scholar

Landis, M. J., Matzke, N. J., Moore, B. R. & Huelsenbeck, J. P. 2013. Bayesian analysis of biogeography when the number of areas is large. - Systematic Biology 62: 789-804. DOI: 10.1093/sysbio/syt04010.1093/sysbio/syt040406400823736102Search in Google Scholar

Lerner, H. R. L. & Mindell, D. P. 2005. Phylogeny of eagles, old world vultures, and other Accipitridae based on nuclear and mitochondrial DNA. - Molecular Phylogenetics and Evolution 37: 327-346. DOI: 10.1016/j.ympev.2005.04.01010.1016/j.ympev.2005.04.01015925523Search in Google Scholar

Louchart, A. 2008. Emergence of long distance bird migrations: a new model integrating global climate changes. - Naturwissenschaften 95: 1109-1119. DOI: 10.1007/s00114-008-0435-310.1007/s00114-008-0435-318712337Search in Google Scholar

Matzke, N. J. 2013. Probabilistic historical biogeography: new models for founder-event speciation, imperfect detection, and fossils allow improved accuracy and model-testing. - Ph.D. thesis, Department Integrative Biology and Designated Emphasis in Computational and Genomic Biology, University of California, Berkeley. Available at http://phylo. wikidot.com/local-files/biogeobears/Matzke_ PhD_FINAL_v5_w_refs.pdf.10.21425/F5FBG19694Search in Google Scholar

Milá, B., Smith, T. B. & Wayne, R. K. 2006. Postglacial population expansion drives the evolution of long-distance migration in a songbird. - Evolution 60: 2403-2409. DOI: 10.1111/j.0014-3820.2006. tb01875.x Newton, I. 2008. The migration ecology of birds. - Academic Press, London, pp. 97610.1111/j.0014-3820.2006.tb01875.xSearch in Google Scholar

Outlaw, D. C., Voelker, G., Milá, B. & Girman, D. J. 2003. Evolution of long-distance migration in and historical biogeography of Catharus thrushes: a molecular phylogenetic approache. - The Auk 120: 299-310. DOI: 10.1642/00048038(2003)120[0299:EOLMIA] 2.0.CO;2Search in Google Scholar

Padian, K. & Chiappe, L. M. 1998. The origin and early evolution of birds. - Biological Reviews 73: 1-42. DOI: 10.1111/j.1469-185X.1997.tb00024.x Pagel, M., Meade, A. & Barker, D. 2004. Bayesian estimation of ancestral character states on phylogenies. - Systematic Biology 53: 673-684. DOI: 10.1080/1063515049052223210.1080/1063515049052223215545248Search in Google Scholar

Pagel, M. & Meade, A. 2006. Bayesian analysis of correlated evolution of discrete characters by reversible- jump Markov Chain Monte Carlo. - The American Naturalist 167: 808-825. DOI: 10.1086/50344410.1086/50344416685633Search in Google Scholar

Paradis, E., Claude, J. & Strimmer, K. 2004. APE: analyses of phylogenetics and evolution in R language. - Bioinformatics 20: 289-290. DOI: 10.1093/bioinformatics/ btg412Search in Google Scholar

Rappole, J. H. & Jones, P. 2002. Evolution of Old and New World migration systems. - Ardea 90: 525-537.Search in Google Scholar

R Development Core Team. 2012. R: a language and environment for statistical computing. - R Foundation for Statistical Computing, Vienna. Available at http://www. R-project.org.Search in Google Scholar

Ree, R. H., Moore, B. R., Webb, C. O. & Donoghue, M. J. 2005. A likelihood framework for inferring the evolution of geographic range on phylogenetic trees. - Evolution 59: 2299-2311. DOI: 10.1111/ j.0014-3820.2005.tb00940.x 10.1111/j.0014-3820.2005.tb00940.xSearch in Google Scholar

Ree, R. H. & Smith, S. A. 2008. Maximum likelihood inference of geographic range evolution by dispersal, local extinction, and cladogenesis. - Systematic Biology 57: 4-14. DOI: 10.1080/1063515070188388110.1080/1063515070188388118253896Search in Google Scholar

Ronquist, F. 1997. Dispersal-vicariance analysis: a new approach to the quantification of historical biogeography. - Systematic Biology 46: 195-203. DOI: 10.1093/sysbio/46.1.19510.1093/sysbio/46.1.195Search in Google Scholar

Roulin, A. & Wink, M. 2004. Predator-prey relationships and the evolution of colour polymorphism: a comparative analysis in diurnal raptors. - Biological Journal of the Linnean Society 81: 565-578. DOI: 10.1111/j.1095-8312.2004.00308.x 10.1111/j.1095-8312.2004.00308.xSearch in Google Scholar

Stamatakis, A. 2006. RAxML-VI-HPC: maximum likelihood- based phylogenetic analyses with thousands of taxa and mixed models. - Bioinformatics 22: 2688-2690. DOI: 10.1093/bioinformatics/btl44610.1093/bioinformatics/btl44616928733Search in Google Scholar

Stiles, F. G. 1980. Evolutionary implications of habitat relations between permanent and winter resident landbirds in Costa Rica. - In: Keast, A. & Morton, E. S. (eds.) Migrant Birds in the Neotropics. - Smithsonian Institution Press, Washington D.C., pp. 421-435.Search in Google Scholar

Tökölyi, J. & Barta, Z. 2011. Breeding phenology determines evolutionary transitions in migratory behaviour in finches and allies. - Oikos 120: 184-193. DOI: 10.1111/j.1600-0706.2010.18592.x 10.1111/j.1600-0706.2010.18592.xSearch in Google Scholar

Wink, M. & Sauer-Gürth, H. 2004. Phylogenetic relationships in diurnal raptors based on nucleotide sequences of mitochondrial and nuclear marker genes. - In: Motta-Junior, J. C., Bueno, A., Chancellor, R. & Meyburg, B. U. (eds.) Raptors worldwide. WWGBP, Berlin, pp. 483-498.Search in Google Scholar

Zachos, J., Pagani, M., Sloan, L., Thomas, E. & Billups, K. 2001. Trends, rhythms, and aberrations in global climate 65 Ma to present. - Science 292: 686-693. DOI: 10.1126/science.105941210.1126/science.105941211326091Search in Google Scholar

Zink, R. M. 2011. The evolution of avian migration. - Biological Journal of the Linnean Society 104: 237-250. DOI: 10.1111/j.1095-8312.2011.01752.x 10.1111/j.1095-8312.2011.01752.xSearch in Google Scholar

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