This work is licensed under the Creative Commons Attribution 4.0 International License.
Abawi, G. S., and Chen, J. 1998. Concomitant pathogen and pest interactions. Pp. 135–158 in K. R. Barker, G. A. Pederson, G. L. Windham, and J. M. Bartels, eds. Plant and nematode interactions. Agronomy monograph 36. Madison: American Society of Agronomy, Crop Science Society of America and Soil Science Society of America.AbawiG. S.ChenJ.1998Concomitant pathogen and pest interactions135158inBarkerK. R.PedersonG. A.WindhamG. L.BartelsJ. M.eds.Plant and nematode interactions. Agronomy monograph 36MadisonAmerican Society of Agronomy, Crop Science Society of America and Soil Science Society of AmericaSearch in Google Scholar
Anonymous. 1996. Official methods of analysis. Arlington: Association of Official Analytical Chemists.Anonymous1996Official methods of analysisArlingtonAssociation of Official Analytical ChemistsSearch in Google Scholar
Aprà, E., Bylaska, E. J., de Jong, W. A, Govind, N., Kowalski, K., Straatsma, T. P., Valiev, M., van Dam, H. J. J., Alexeev, Y., Anchell, J., Anisimov, V., Aquino, F. W., Atta-Fynn, R., Autschbach, J., Bauman, N. P., Becca, J. C., Bernholdt, D. E., Bhaskaran-Nair, K., Bogatko, S., Borowski, P., Boschen, J., Brabec, J., Bruner, A., Cauët, E., Chen, Y., Chuev, G. N., Cramer, C. J., Daily, J., Deegan, M. J. O., Dunning Jr. T. H., Dupuis, M., Dyall, K. G., Fann, G. I., Fischer, S. A., Fonari, A., Früchtl, H., Gagliardi, L., Garza, J., Gawande, N., Ghosh, S., Glaesemann, K., Götz, A. W., Hammond, J., Helms, V., Hermes, E. D., Hirao, K., Hirata, S., Jacquelin, M., Jensen, L., Johnson, B. G., Jónsson, H., Kendall, R. A., Klemm, M., Kobayashi, R., Konkov, V., Krishnamoorthy, S., Krishnan, M., Lin, Z., Lins, R. D., Littlefield, R. J., Logsdail, A. J., Lopata, K., Ma, W., Marenich, A. V., Martin del Campo, J., Mejia-Rodriguez, D., Moore, J. E., Mullin, J. M., Nakajima, T., Nascimento, D. R., Nichols, J. A., Nichols, P. J., Nieplocha, J., Otero-de-la-Roza, A., Palmer, B., Panyala, A., Pirojsirikul, T., Peng, B., Peverati, R., Pittner, J., Pollack, L., Richard, R. M., Sadayappan, P., Schatz, G. C., Shelton, W. A., Silverstein, D. W., Smith, D. M. A., Soares, T. A., Song, D., Swart, M., Taylor, H. L., Thomas, G. S., Tipparaju, V., Truhlar, D. G., Tsemekhman, K., Van Voorhis, T., Vázquez-Mayagoitia, A., Verma, P., Villa, O., Vishnu, A., Vogiatzis, K. D., Wang, D., Weare, J. H., Williamson, M. J., Windus, T. L., Woliński, K., Wong, A. T., Wu, Q., Yang, C., Yu, Q., Zacharias, M., Zhang, Z., Zhao, Y., and Harrison, R. J. 2020. NWChem: past, present, and future. The Journal of Chemical Physics 152: 184102. doi/10.1063/5.0004997.ApràE.BylaskaE. J.de JongW. AGovindN.KowalskiK.StraatsmaT. P.ValievM.van DamH. J. J.AlexeevY.AnchellJ.AnisimovV.AquinoF. W.Atta-FynnR.AutschbachJ.BaumanN. P.BeccaJ. C.BernholdtD. E.Bhaskaran-NairK.BogatkoS.BorowskiP.BoschenJ.BrabecJ.BrunerA.CauëtE.ChenY.ChuevG. N.CramerC. J.DailyJ.DeeganM. J. O.DunningT. H.Jr.DupuisM.DyallK. G.FannG. I.FischerS. A.FonariA.FrüchtlH.GagliardiL.GarzaJ.GawandeN.GhoshS.GlaesemannK.GötzA. W.HammondJ.HelmsV.HermesE. D.HiraoK.HirataS.JacquelinM.JensenL.JohnsonB. G.JónssonH.KendallR. A.KlemmM.KobayashiR.KonkovV.KrishnamoorthyS.KrishnanM.LinZ.LinsR. D.LittlefieldR. J.LogsdailA. J.LopataK.MaW.MarenichA. V.Martin del CampoJ.Mejia-RodriguezD.MooreJ. E.MullinJ. M.NakajimaT.NascimentoD. R.NicholsJ. A.NicholsP. J.NieplochaJ.Otero-de-la-RozaA.PalmerB.PanyalaA.PirojsirikulT.PengB.PeveratiR.PittnerJ.PollackL.RichardR. M.SadayappanP.SchatzG. C.SheltonW. A.SilversteinD. W.SmithD. M. A.SoaresT. A.SongD.SwartM.TaylorH. L.ThomasG. S.TipparajuV.TruhlarD. G.TsemekhmanK.Van VoorhisT.Vázquez-MayagoitiaA.VermaP.VillaO.VishnuA.VogiatzisK. D.WangD.WeareJ. H.WilliamsonM. J.WindusT. L.WolińskiK.WongA. T.WuQ.YangC.YuQ.ZachariasM.ZhangZ.ZhaoY.HarrisonR. J.2020NWChem: past, present, and futureThe Journal of Chemical Physics15218410210.1063/5.0004997Open DOISearch in Google Scholar
Aukema, K. G., Tassoulas, L. J., Robinson, S. L., Konopatski, J. F., Bygd, M. D., and Wackett, L. P. 2020. Cyanuric acid biodegradation via biuret: physiology, taxonomy, and geospatial distribution. Applied and Environmental Microbiology 86: e01964–19. doi/10.1128/aem.01964-19.AukemaK. G.TassoulasL. J.RobinsonS. L.KonopatskiJ. F.BygdM. D.WackettL. P.2020Cyanuric acid biodegradation via biuret: physiology, taxonomy, and geospatial distributionApplied and Environmental Microbiology86e019641910.1128/aem.01964-19Open DOISearch in Google Scholar
Back, M. A., Haydock, P. P. J., and Jenkinson, P. 2002. Disease complexes involving plant parasitic nematodes and soilborne pathogens. Plant Pathology 51: 683–697. doi/10.1046/j.1365-3059.2002.00785.x.BackM. A.HaydockP. P. J.JenkinsonP.2002Disease complexes involving plant parasitic nematodes and soilborne pathogensPlant Pathology5168369710.1046/j.1365-3059.2002.00785.xOpen DOISearch in Google Scholar
Bashir, O., Khan, K., Hakeem, K. R., Mir, N. A., Rather, G. H., and Mohiuddin, R. 2016. Soil microbe diversity and root exudates as important aspects of rhizosphere ecosystem. Pp. 337–357 in K. R. Hakeem, and M.S. Akhtar, eds. Plant, soil and microbes. Heidelberg: Springer Nature.BashirO.KhanK.HakeemK. R.MirN. A.RatherG. H.MohiuddinR.2016Soil microbe diversity and root exudates as important aspects of rhizosphere ecosystem337357inHakeemK. R.AkhtarM.S.eds.Plant, soil and microbesHeidelbergSpringer NatureSearch in Google Scholar
Berendsen, R. L., Pieterse, C. M. J., and Bakker, P. A. H. M. 2012. The rhizosphere microbiome and plant health. Trends in Plant Science 17:478–486. doi/10.1016/j.tplants.2012.04.001.BerendsenR. L.PieterseC. M. J.BakkerP. A. H. M.2012The rhizosphere microbiome and plant healthTrends in Plant Science1747848610.1016/j.tplants.2012.04.001Open DOISearch in Google Scholar
Bergeson, G. B., van Gundy, S. D., and Thomason, I. J. 1970. Effect of Meloidogyne javanica on rhizosphere microflora and Fusarium wilt of tomato. Phytopathology 60:1245–1249.BergesonG. B.van GundyS. D.ThomasonI. J.1970Effect of Meloidogyne javanica on rhizosphere microflora and Fusarium wilt of tomatoPhytopathology6012451249Search in Google Scholar
Cameron, S. M., Durchschein, K., Richman, J. E., Sadowsky, M. J., and Wackett, L. P. 2011. New family of biuret hydrolases involved in s-triazine ring metabolism. ACS Catalysis 1:1075–1082. doi/10.1021/cs200295n.CameronS. M.DurchscheinK.RichmanJ. E.SadowskyM. J.WackettL. P.2011New family of biuret hydrolases involved in s-triazine ring metabolismACS Catalysis11075108210.1021/cs200295nOpen DOISearch in Google Scholar
Campos, V. A. C., Machado, A. R. T., Oliveira, D. F., Campos, V. P., Chagas, R. C. R., and Nunes, A. S. 2012. Changes in metabolites in plant roots after inoculation with Meloidogyne incognita. Nematology 14:579–588. doi/10.1163/156854111X614494.CamposV. A. C.MachadoA. R. T.OliveiraD. F.CamposV. P.ChagasR. C. R.NunesA. S.2012Changes in metabolites in plant roots after inoculation with Meloidogyne incognitaNematology1457958810.1163/156854111X614494Open DOISearch in Google Scholar
Cao, Y., and Li, L. 2014. Improved protein-ligand binding affinity prediction by using a curvature dependent surface area model. Bioinformatics 30:1674–1680. doi/10.1093/bioinformatics/btu104.CaoY.LiL.2014Improved protein-ligand binding affinity prediction by using a curvature dependent surface area modelBioinformatics301674168010.1093/bioinformatics/btu104Open DOISearch in Google Scholar
Conroy, J. J., Green Jr., R. J., and Ferris, J. M. 1972. Interaction of Verticillium albo-atrum and the root lesion nematode, Pratylenchus penetrans, in tomato roots at controlled inoculum densities. Phytopathology 62:362–366.ConroyJ. J.GreenR. J.Jr.FerrisJ. M.1972Interaction of Verticillium albo-atrum and the root lesion nematode, Pratylenchus penetrans, in tomato roots at controlled inoculum densitiesPhytopathology62362366Search in Google Scholar
Denton, C.S., Bardgett, R. D., Cook, R., and Hobbs, P. J. 1999. Low amounts of root herbivory positively influence the rhizosphere microbial community in a temperate grassland soil. Soil Biology and Biochemistry 31:155–165.DentonC.S.BardgettR. D.CookR.HobbsP. J.1999Low amounts of root herbivory positively influence the rhizosphere microbial community in a temperate grassland soilSoil Biology and Biochemistry31155165Search in Google Scholar
Dromph, K. M., Cook, R., Ostlec, N. J., and Bardgetta, R. D. 2006. Root parasite induced nitrogen transfer between plants is density dependent. Soil Biology and Biochemistry 38: 2495–2498. doi/10.1016/j.soilbio.2006.02.005.DromphK. M.CookR.OstlecN. J.BardgettaR. D.2006Root parasite induced nitrogen transfer between plants is density dependentSoil Biology and Biochemistry382495249810.1016/j.soilbio.2006.02.005Open DOISearch in Google Scholar
Esbenshade, P. R., and Triantaphyllou, A. C. 1985. Use of enzyme phenotypes for identification of Meloidogyne species. Journal of Nematology 17:6–20.EsbenshadeP. R.TriantaphyllouA. C.1985Use of enzyme phenotypes for identification of Meloidogyne speciesJournal of Nematology17620Search in Google Scholar
Esquirol, L., Peat, T. S., Wilding, M., Lucent, D., French, N. G., Hartley, C. J., Newman, J., and Scott, C. 2018. Structural and biochemical characterization of the biuret hydrolase (BiuH) from the cyanuric acid catabolism pathway of Rhizobium leguminasorum bv. viciae 3841. PLoS One 13: e0192736–e0192736. doi/10.1371/journal.pone.0192736.EsquirolL.PeatT. S.WildingM.LucentD.FrenchN. G.HartleyC. J.NewmanJ.ScottC.2018Structural and biochemical characterization of the biuret hydrolase (BiuH) from the cyanuric acid catabolism pathway of Rhizobium leguminasorum bv. viciae 3841PLoS One13e0192736e019273610.1371/journal.pone.0192736Open DOISearch in Google Scholar
Evans, K., and Haydock, P. P. 1993. Interactions of nematodes with root-rot fungi. Pp. 104–133 in M. W. Khan, ed. Nematode interactions. Dordrecht: Springer Science + Business Media.EvansK.HaydockP. P.1993Interactions of nematodes with root-rot fungi104133inKhanM. W.ed.Nematode interactionsDordrechtSpringer Science + Business MediaSearch in Google Scholar
Francl, L. J., and Wheeler, T. A. 1993. Interaction of plant-parasitic nematodes with wilt-inducing fungi. Pp. 79–103 in M. W. Khan, ed. Nematode interactions. Dordrecht: Springer Science + Business Media.FranclL. J.WheelerT. A.1993Interaction of plant-parasitic nematodes with wilt-inducing fungi79103inKhanM. W.ed.Nematode interactionsDordrechtSpringer Science + Business MediaSearch in Google Scholar
Golden, J. K., and van Gundy, S. D. 1975. A disease complex of okra and tomato involving the nematode, Meloidogyne incognita, and the soil-inhabiting fungus, Rhizoctonia solani. Phytopathology 65:265–273.GoldenJ. K.van GundyS. D.1975A disease complex of okra and tomato involving the nematode, Meloidogyne incognita, and the soil-inhabiting fungus, Rhizoctonia solaniPhytopathology65265273Search in Google Scholar
Gomes, V. M., Souza, R. M., Almeida, A. M., and Dolinski, C. 2014. Relationships between M. enterolobii and F. solani: spatial and temporal dynamics in the occurrence of guava decline. Nematoda 2:e01014. doi/10.4322/nematoda.01014.GomesV. M.SouzaR. M.AlmeidaA. M.DolinskiC.2014Relationships between M. enterolobii and F. solani: spatial and temporal dynamics in the occurrence of guava declineNematoda2e0101410.4322/nematoda.01014Open DOISearch in Google Scholar
Gomes, V. M., Souza, R. M., Mussi-Dias, V., Silveira, S. F., and Dolinski, C. 2011. Guava decline: a complex disease involving Meloidogyne mayaguensis and Fusarium solani. Journal of Phytopathology 159:45–50. doi/10.1111/j.1439-0434.2010.01711.x.GomesV. M.SouzaR. M.Mussi-DiasV.SilveiraS. F.DolinskiC.2011Guava decline: a complex disease involving Meloidogyne mayaguensis and Fusarium solaniJournal of Phytopathology159455010.1111/j.1439-0434.2010.01711.xOpen DOISearch in Google Scholar
Gomes, V. M., Souza, R. M., Silva, M. M., and Dolinski C. 2008. Caracterização do estado nutricional de goiabeiras em declínio parasitadas por Meloidogyne mayaguensis. Nematologia Brasileira 32:154–160.GomesV. M.SouzaR. M.SilvaM. M.DolinskiC.2008Caracterização do estado nutricional de goiabeiras em declínio parasitadas por Meloidogyne mayaguensisNematologia Brasileira32154160Search in Google Scholar
Gomes, V. M., Souza, R. M., Silveira, S. F., and Almeida, A. M. 2013. Guava decline: effect of root exudates from Meloidogyne enterolobii-parasitized plants on Fusarium solani in vitro and on growth and development of guava seedlings under controlled conditions. European Journal of Plant Pathology 137:393–401. doi/10.1007/s10658-013-0251-2.GomesV. M.SouzaR. M.SilveiraS. F.AlmeidaA. M.2013Guava decline: effect of root exudates from Meloidogyne enterolobii-parasitized plants on Fusarium solani in vitro and on growth and development of guava seedlings under controlled conditionsEuropean Journal of Plant Pathology13739340110.1007/s10658-013-0251-2Open DOISearch in Google Scholar
Gu, X., Wei, Z., Wang, X., Friman, V-P., Huang, J., Wang, X., Mei, X., Xu, Y., Shen, Q., and Jousset, A. 2016. Pathogen invasion indirectly changes the composition of soil microbiome via shifts in root exudation profile. Biology and Fertility of Soils 52:997–1005. doi/10.1007/s00374-016-1136-2.GuX.WeiZ.WangX.FrimanV-P.HuangJ.WangX.MeiX.XuY.ShenQ.JoussetA.2016Pathogen invasion indirectly changes the composition of soil microbiome via shifts in root exudation profileBiology and Fertility of Soils52997100510.1007/s00374-016-1136-2Open DOISearch in Google Scholar
Haase, S., Ruess, L., Neumann, G., Marhan, S., and Kandeler, E. 2007. Low-level herbivory by root-knot nematodes (Meloidogyne incognita) modifies root hair morphology and rhizodeposition in host plants (Hordeum vulgare). Plant and Soil 301:151–164. doi/10.1007/s11104-007-9431-1.HaaseS.RuessL.NeumannG.MarhanS.KandelerE.2007Low-level herbivory by root-knot nematodes (Meloidogyne incognita) modifies root hair morphology and rhizodeposition in host plants (Hordeum vulgare)Plant and Soil30115116410.1007/s11104-007-9431-1Open DOISearch in Google Scholar
Hajihassani, A., Smiley, R. W., and Afshar, F. J. 2013. Effects of co-inoculation with Pratylenchus thornei and Fusarium culmorum on growth and yield of winter wheat. Plant Disease 97:1470–1477. doi.org/10.1094/PDIS-02-13-0168-REHajihassaniA.SmileyR. W.AfsharF. J.2013Effects of co-inoculation with Pratylenchus thornei and Fusarium culmorum on growth and yield of winter wheatPlant Disease9714701477doi.org/10.1094/PDIS-02-13-0168-RESearch in Google Scholar
Hasan, A. 1985. Breaking the resistance in chilli to root-knot nematodes by fungal pathogens. Nematologica 31:210–217.HasanA.1985Breaking the resistance in chilli to root-knot nematodes by fungal pathogensNematologica31210217Search in Google Scholar
Hasan, A., and Khan, M. N. 1985. The effect of Rhizoctonia solani, Sclerotium rolfsii, and Verticillium dahliae on the resistance of tomato to Meloidogyne incognita. Nematologia Mediterranea 13:133–136.HasanA.KhanM. N.1985The effect of Rhizoctonia solani, Sclerotium rolfsii, and Verticillium dahliae on the resistance of tomato to Meloidogyne incognitaNematologia Mediterranea13133136Search in Google Scholar
Huang, X., Liu, S., Liu, X., Zhang, S., Li, L., Zhao, H., Zhao, J., Zhang, J., and Cai, Z. 2020. Plant pathological condition is associated with fungal community succession triggered by root exudates in the plant-soil system. Soil Biology and Biochemistry 151: 108046. doi/10.1016/j.soilbio.2020.108046.HuangX.LiuS.LiuX.ZhangS.LiL.ZhaoH.ZhaoJ.ZhangJ.CaiZ.2020Plant pathological condition is associated with fungal community succession triggered by root exudates in the plant-soil systemSoil Biology and Biochemistry15110804610.1016/j.soilbio.2020.108046Open DOISearch in Google Scholar
Huang, X., Zhou, X., Zhang, J., and Cai, Z. 2019. Highly connected taxa located in the microbial network are prevalent in the rhizosphere soil of healthy plant. Biology and Fertility of Soils 55:299–312. doi/10.1007/s00374-019-01350-1.HuangX.ZhouX.ZhangJ.CaiZ.2019Highly connected taxa located in the microbial network are prevalent in the rhizosphere soil of healthy plantBiology and Fertility of Soils5529931210.1007/s00374-019-01350-1Open DOISearch in Google Scholar
Jones, W. W. 1954. Biuret toxicity of urea foliage sprays on citrus. Science 120:499–500. doi/10.1126/science.120.3117.499.JonesW. W.1954Biuret toxicity of urea foliage sprays on citrusScience12049950010.1126/science.120.3117.499Open DOISearch in Google Scholar
Katritzky, A. R., Scriven, E. F. V., Majumder, S., Akhmedov, R. G., Akhmedov, N. G., and Vakulenko, A. V. 2005. Direct nitration of five membered heterocycles. ARKIVOC 2005:179–191. doi/10.3998/ark.5550190.0006.320.KatritzkyA. R.ScrivenE. F. V.MajumderS.AkhmedovR. G.AkhmedovN. G.VakulenkoA. V.2005Direct nitration of five membered heterocyclesARKIVOC200517919110.3998/ark.5550190.0006.320Open DOISearch in Google Scholar
Khan, H., Mubarak, M. S., and Amin. S. 2017. Antifungal potential of alkaloids as an emerging therapeutic target. Current Drug Targets 18:1825–1835. doi/10.2174/1389450117666160719095517.KhanH.MubarakM. S.AminS.2017Antifungal potential of alkaloids as an emerging therapeutic targetCurrent Drug Targets181825183510.2174/1389450117666160719095517Open DOISearch in Google Scholar
Khan, M. W. 1993. Mechanisms of interactions between nematodes and other plant pathogens. Pp. 55–78 in M. W. Khan, ed. Nematode interactions. Dordrecht: Springer Science + Business Media.KhanM. W.1993Mechanisms of interactions between nematodes and other plant pathogens5578inKhanM. W.ed.Nematode interactionsDordrechtSpringer Science + Business MediaSearch in Google Scholar
Khan, T. A., and Husain, S. I. 1989. Relative resistance of six cowpea cultivars as affected by the concomitance of two nematodes and a fungus. Nematologia Mediterranea 17:39–41.KhanT. A.HusainS. I.1989Relative resistance of six cowpea cultivars as affected by the concomitance of two nematodes and a fungusNematologia Mediterranea173941Search in Google Scholar
Klamt, A., and Schüümann, G. 1993. COSMO: A new approach to dielectric screening in solvents with explicit expressions for the screening energy and its gradient. Journal of the Chemical Society. Perkin Transactions 2:799–805. doi/10.1039/P29930000799.KlamtA.SchüümannG.1993COSMO: A new approach to dielectric screening in solvents with explicit expressions for the screening energy and its gradientJournal of the Chemical Society. Perkin Transactions279980510.1039/P29930000799Open DOISearch in Google Scholar
Koo, B-J., Adriano, D. C., Bolan, N. S., and Barton, C. D. 2005. Root exudates and microorganisms. Pp. 421–428 in D. Hillel, ed. Encyclopedia of soils in the environment. Amsterdam: Elsevier.KooB-J.AdrianoD. C.BolanN. S.BartonC. D.2005Root exudates and microorganisms421428inHillelD.ed.Encyclopedia of soils in the environmentAmsterdamElsevierSearch in Google Scholar
Lamelas, A., Desgarennes, D., López-Lima, D., Villain, L., Alonso-Sánchez, A., Artacho, A., Latorre, A., Moya, A., and Carrión, G. 2020. The bacterial microbiome of Meloidogyne-based disease complex in coffee and tomato. Frontiers in Plant Science 11. doi/10.3389/fpls.2020.00136.LamelasA.DesgarennesD.López-LimaD.VillainL.Alonso-SánchezA.ArtachoA.LatorreA.MoyaA.CarriónG.2020The bacterial microbiome of Meloidogyne-based disease complex in coffee and tomatoFrontiers in Plant Science1110.3389/fpls.2020.00136Open DOISearch in Google Scholar
Manzanilla-López, R. H., and Starr, J. L. 2009. Interactions with other pathogens. Pp. 223–245 in R. N. Perry, M. Moens, and J. L. Starr, eds. Root-knot nematodes. Oxfordshire: CABI.Manzanilla-LópezR. H.StarrJ. L.2009Interactions with other pathogens223245inPerryR. N.MoensM.StarrJ. L.eds.Root-knot nematodesOxfordshireCABISearch in Google Scholar
Marley, P. S., and Hillocks, R. J. 1994. Effect of root-knot nematodes on cajanol accumulation in the vascular tissues of pigeonpea after stem inoculation with Fusarium udum. Plant Pathology 43:172–176. doi/10.1111/j.1365-3059.1994.tb00567.x.MarleyP. S.HillocksR. J.1994Effect of root-knot nematodes on cajanol accumulation in the vascular tissues of pigeonpea after stem inoculation with Fusarium udumPlant Pathology4317217610.1111/j.1365-3059.1994.tb00567.xOpen DOISearch in Google Scholar
Martínez, L., Andreani, R., and Martínez, J. M. 2007. Convergent algorithms for protein structural alignment. BMC Bioinformatics 8:306. doi/10.1186/1471-2105-8-306.MartínezL.AndreaniR.MartínezJ. M.2007Convergent algorithms for protein structural alignmentBMC Bioinformatics830610.1186/1471-2105-8-306Open DOISearch in Google Scholar
Miyazaki, Y., Kono, Y., Shimazu, A., Takeuchi, S., and Yonehara, H. 1968. Production of nitraminoacetic acid by Streptomyces noursei 8054-MC 3. The Journal of Antibiotics 21:279–282. doi/10.7164/antibiotics.21.279.MiyazakiY.KonoY.ShimazuA.TakeuchiS.YoneharaH.1968Production of nitraminoacetic acid by Streptomyces noursei 8054-MC 3The Journal of Antibiotics2127928210.7164/antibiotics.21.279Open DOISearch in Google Scholar
Navi, S. S., and Yang, X. B. 2016. Sudden death syndrome - a growing threat of losses in soybeans. CAB Reviews. doi/10.1079/PAVSNNR201611039.NaviS. S.YangX. B.2016Sudden death syndrome - a growing threat of losses in soybeansCAB Reviews10.1079/PAVSNNR201611039Open DOISearch in Google Scholar
Niu, W., Molefe, M. N., and Frost, J. W. 2003. Microbial synthesis of the energetic material precursor 1,2,4-butanetriol. Journal of the American Chemical Society 125:12998–12999. doi/10.1021/ja036391+.NiuW.MolefeM. N.FrostJ. W.2003Microbial synthesis of the energetic material precursor 1,2,4-butanetriolJournal of the American Chemical Society125129981299910.1021/ja036391+Open DOISearch in Google Scholar
O’Boyle, N. M., Banck, M., James, C. A., Morley, C., Vandermeersch, T., and Hutchison, G. R. 2011. Open Babel: An open chemical toolbox. Journal of Cheminformatics 3. doi/10.1186/1758-2946-3-33.O’BoyleN. M.BanckM.JamesC. A.MorleyC.VandermeerschT.HutchisonG. R.2011Open Babel: An open chemical toolboxJournal of Cheminformatics310.1186/1758-2946-3-33Open DOISearch in Google Scholar
Ochiai, K., Uesugi, A., Masuda, Y., Nishii, M., and Matoh, T. 2020. Overexpression of exogenous biuret hydrolase in rice plants confers tolerance to biuret toxicity. Plant Direct 4:e00290. doi/10.1002/pld3.290.OchiaiK.UesugiA.MasudaY.NishiiM.MatohT.2020Overexpression of exogenous biuret hydrolase in rice plants confers tolerance to biuret toxicityPlant Direct4e0029010.1002/pld3.290Open DOISearch in Google Scholar
Parry, R., Nishino, S., and Spain, J. 2011. Naturally-occurring nitro compounds. Natural Products Report 28:152–167. doi/10.1039/c0np00024h.ParryR.NishinoS.SpainJ.2011Naturally-occurring nitro compoundsNatural Products Report2815216710.1039/c0np00024hOpen DOISearch in Google Scholar
Passos, L. P. 1996. Métodos analíticos e laboratoriais em fisiologia vegetal. Coronel Pacheco: Embrapa.PassosL. P.1996Métodos analíticos e laboratoriais em fisiologia vegetalCoronel PachecoEmbrapaSearch in Google Scholar
Pereira, F. M., Souza, R.M., Souza, P. M., Dolinski, C., and Santos, G. K. 2009. Estimativa do impacto econômico e social direto de Meloidogyne mayaguensis na cultura da goiaba no Brasil. Nematologia Brasileira 33:176–181.PereiraF. M.SouzaR.M.SouzaP. M.DolinskiC.SantosG. K.2009Estimativa do impacto econômico e social direto de Meloidogyne mayaguensis na cultura da goiaba no BrasilNematologia Brasileira33176181Search in Google Scholar
Pettersen, E. F., Goddard, T. D., Huang, C. C., Couch, G. S., Greenblatt, D. M., Meng, E. C., and Ferrin, T. E. 2004. UCSF Chimera - a visualization system for exploratory research and analysis. Journal of Computational Chemistry 25:1605–1612. doi/10.1002/jcc.20084.PettersenE. F.GoddardT. D.HuangC. C.CouchG. S.GreenblattD. M.MengE. C.FerrinT. E.2004UCSF Chimera - a visualization system for exploratory research and analysisJournal of Computational Chemistry251605161210.1002/jcc.20084Open DOISearch in Google Scholar
R Core Team. 2021. R: A language and environment for statistical computing. R Foundation for Statistical Computing. http://www.R-project.org/.R Core Team2021R: A language and environment for statistical computingR Foundation for Statistical Computinghttp://www.R-project.org/.Search in Google Scholar
Sanchez-Cañizares, C., Beatriz J., Poole, P. S., and Tkacz, A. 2017. Understanding the holobiont: the interdependence of plants and their microbiome. Current Opinion in Microbiology 38:188–196. http://dx.doi.org/10.1016/j.mib.2017.07.001.Sanchez-CañizaresC.BeatrizJ.PooleP. S.TkaczA.2017Understanding the holobiont: the interdependence of plants and their microbiomeCurrent Opinion in Microbiology38188196http://dx.doi.org/10.1016/j.mib.2017.07.001.Search in Google Scholar
Sanford, W. G., Gowing, D. P., Young, H. Y., and Leeper, R. W. 1954. Toxicity to pineapple plants of biuret found in urea fertilizers from different sources. Science 120:349–350. doi/10.1126/science.120.3113.349.SanfordW. G.GowingD. P.YoungH. Y.LeeperR. W.1954Toxicity to pineapple plants of biuret found in urea fertilizers from different sourcesScience12034935010.1126/science.120.3113.349Open DOISearch in Google Scholar
Sanogo, S., and Zhang, J. 2015. Resistance sources, resistance screening techniques and disease management for Fusarium wilt in cotton. Euphytica 207:255–271. doi/10.1007/s10681-015-1532-y.SanogoS.ZhangJ.2015Resistance sources, resistance screening techniques and disease management for Fusarium wilt in cottonEuphytica20725527110.1007/s10681-015-1532-yOpen DOISearch in Google Scholar
Sasse, J., Martinoia, E., and Northen, T. 2018. Feed your friends: do plant exudates shape the root microbiome? Trends in Plant Science. 23:25–41. doi/10.1016/j.tplants.2017.09.003.SasseJ.MartinoiaE.NorthenT.2018Feed your friends: do plant exudates shape the root microbiome?Trends in Plant Science23254110.1016/j.tplants.2017.09.003Open DOISearch in Google Scholar
Scott, A. J., and Knott, M. A. 1974. Cluster analysis method for grouping means in the analysis of variance. Biometrics 30:507–512. doi/10.2307/2529204.ScottA. J.KnottM. A.1974Cluster analysis method for grouping means in the analysis of varianceBiometrics3050751210.2307/2529204Open DOISearch in Google Scholar
Snedecor, G. W., and Cochran, W. G. 1989. Statistical methods. Ames: Iowa State University Press.SnedecorG. W.CochranW. G.1989Statistical methodsAmesIowa State University PressSearch in Google Scholar
Sreevidya, N., and Mehrotra, S. 2003. Spectrophotometric method for estimation of alkaloids precipitable with Dragendorff’s reagent in plant materials. Journal of AOAC International 86:1124–1127. doi/10.1093/jaoac/86.6.1124.SreevidyaN.MehrotraS.2003Spectrophotometric method for estimation of alkaloids precipitable with Dragendorff’s reagent in plant materialsJournal of AOAC International861124112710.1093/jaoac/86.6.1124Open DOISearch in Google Scholar
Still, W. C., Kahn, M., and Mitra, A. 1978. Rapid chromatographic technique for preparative separations with moderate resolution. Journal of Organic Chemistry 43:2923–2925. doi/10.1021/jo00408a041.StillW. C.KahnM.MitraA.1978Rapid chromatographic technique for preparative separations with moderate resolutionJournal of Organic Chemistry432923292510.1021/jo00408a041Open DOISearch in Google Scholar
Suntsova, M. A., Marochkin, I. I., and Dorofeeva, O. V. 2013. Structure and energetic properties of 1,5-dinitrobiuret. Structural Chemistry 24:745–750. doi/10.1007/s11224-012-0176-y.SuntsovaM. A.MarochkinI. I.DorofeevaO. V.2013Structure and energetic properties of 1,5-dinitrobiuretStructural Chemistry2474575010.1007/s11224-012-0176-yOpen DOISearch in Google Scholar
Taheri, A., Hollamby, G. J., Vanstone, V. A., and Neate, S. M. 1994. Interaction between root lesion nematode, Pratylenchus neglectus (Rensch 1924) Chitwood and Oteifa 1952, and root rotting fungi of wheat. New Zealand Journal of Crop and Horticultural Science 22:181–185. doi/10.1080/01140671.1994.9513823.TaheriA.HollambyG. J.VanstoneV. A.NeateS. M.1994Interaction between root lesion nematode, Pratylenchus neglectus (Rensch 1924) Chitwood and Oteifa 1952, and root rotting fungi of wheatNew Zealand Journal of Crop and Horticultural Science2218118510.1080/01140671.1994.9513823Open DOISearch in Google Scholar
Tian, B-Y., Cao, Y., and Zhang, K-Q. 2015. Metagenomic insights into communities, functions of endophytes, and their associates with infection by root-knot nematode, Meloidogyne incognita, in tomato roots. Scientific Reports 5:17087. doi/10.1038/srep17087.TianB-Y.CaoY.ZhangK-Q.2015Metagenomic insights into communities, functions of endophytes, and their associates with infection by root-knot nematode, Meloidogyne incognita, in tomato rootsScientific Reports51708710.1038/srep17087Open DOISearch in Google Scholar
Tosco, P., Balle, T., and Shiri, F. 2011. Open3DALIGN: an open-source software aimed at unsupervised ligand alignment. Journal of Computer-Aided Molecular Design 25:777–783. doi/10.1007/s10822-011-9462-9.ToscoP.BalleT.ShiriF.2011Open3DALIGN: an open-source software aimed at unsupervised ligand alignmentJournal of Computer-Aided Molecular Design2577778310.1007/s10822-011-9462-9Open DOISearch in Google Scholar
Tu, C., Koenning, S. R., and Hu, S. 2003. Root-parasitic nematodes enhance soil microbial activities and nitrogen mineralization. Microbial Ecology 46:134–144. doi/10.1007/s00248-002-1068-2.TuC.KoenningS. R.HuS.2003Root-parasitic nematodes enhance soil microbial activities and nitrogen mineralizationMicrobial Ecology4613414410.1007/s00248-002-1068-2Open DOISearch in Google Scholar
van Gundy, S. D., Kirkpatrick, J. D., and Golden, J. 1977. The nature and role of metabolic leakage from root-knot nematode galls and infection by Rhizoctonia solani. Journal of Nematology 9:113–121.van GundyS. D.KirkpatrickJ. D.GoldenJ.1977The nature and role of metabolic leakage from root-knot nematode galls and infection by Rhizoctonia solaniJournal of Nematology9113121Search in Google Scholar
Veloso, J. S., Câmara, M. P. S., Souza, R. M. 2020. Guava decline: updating its etiology from ‘Fusarium solani’ to Neocosmospora falciformis. European Journal of Plant Pathology 159:455–460. doi/10.1007/s10658-020-02161-zVelosoJ. S.CâmaraM. P. S.SouzaR. M.2020Guava decline: updating its etiology from ‘Fusarium solani’ to Neocosmospora falciformisEuropean Journal of Plant Pathology15945546010.1007/s10658-020-02161-zOpen DOISearch in Google Scholar
Villain, L., Sarah, J. L., Hernández, A., Bertrand, B., Anthony, F., Lashermes P., Charmetant, P., Anzueto, F., Figueroa, P., and Carneiro, R. M. D. G. 2013. Diversity of root-knot nematodes associated with coffee orchards in Central America. Nematropica 43: 194–206.VillainL.SarahJ. L.HernándezA.BertrandB.AnthonyF.LashermesP.CharmetantP.AnzuetoF.FigueroaP.CarneiroR. M. D. G.2013Diversity of root-knot nematodes associated with coffee orchards in Central AmericaNematropica43194206Search in Google Scholar
Vives-Peris, V., Ollas, C., Gómez-Cadenas, A., and Pérez-Clemente, R. M. 2020. Root exudates: from plant to rhizosphere and beyond. Plant Cell Reports 39:3–17. doi/10.1007/s00299-019-02447-5.Vives-PerisV.OllasC.Gómez-CadenasA.Pérez-ClementeR. M.2020Root exudates: from plant to rhizosphere and beyondPlant Cell Reports3931710.1007/s00299-019-02447-5Open DOISearch in Google Scholar
Wang, E. L. H., and Bergeson, G. B. 1974. Biochemical changes in root exudate and xylem sap of tomato plants infected with Meloidogyne incognita. Journal of Nematology 6: 194–202.WangE. L. H.BergesonG. B.1974Biochemical changes in root exudate and xylem sap of tomato plants infected with Meloidogyne incognitaJournal of Nematology6194202Search in Google Scholar
Wang, E. L. H., Hodges, T. K., and Bergeson, G. B. 1975. Meloidogyne incognita-induced changes in cell permeability of galled roots. Journal of Nematology 7:256–260.WangE. L. H.HodgesT. K.BergesonG. B.1975Meloidogyne incognita-induced changes in cell permeability of galled rootsJournal of Nematology7256260Search in Google Scholar
Wang, J., Wang, W., Kollman, P. A., and Case, D. A. 2006. Automatic atom type and bond type perception in molecular mechanical calculations. Journal of Molecular Graphics & Modelling 25:247–60. doi/10.1016/j.jmgm.2005.12.005.WangJ.WangW.KollmanP. A.CaseD. A.2006Automatic atom type and bond type perception in molecular mechanical calculationsJournal of Molecular Graphics & Modelling252476010.1016/j.jmgm.2005.12.005Open DOISearch in Google Scholar
Wang, J., Wolf, R. M., Caldwell, J. W., Kollman, P. A., and Case, D. A. 2004. Development and testing of a general amber force field. Journal of Computational Chemistry 25:1157–1174. doi/10.1002/jcc.20035.WangJ.WolfR. M.CaldwellJ. W.KollmanP. A.CaseD. A.2004Development and testing of a general amber force fieldJournal of Computational Chemistry251157117410.1002/jcc.20035Open DOISearch in Google Scholar
Wei, Z., Hu, J., Gu, Y., Yin, S., Xu, Y., Jousset, A., Shen, Q., and Friman, V-P. 2017. Ralstonia solanacearum pathogen disrupts bacterial rhizosphere microbiome during an invasion. Soil Biology and Biochemistry 118:8–17. doi/10.1016/j.soilbio.2017.11.012.WeiZ.HuJ.GuY.YinS.XuY.JoussetA.ShenQ.FrimanV-P.2017Ralstonia solanacearum pathogen disrupts bacterial rhizosphere microbiome during an invasionSoil Biology and Biochemistry11881710.1016/j.soilbio.2017.11.012Open DOISearch in Google Scholar
Wurst, S., van Beersum, S., Wagenaar, R., Bakx-Schotman, T., Drigo, B., Janzik, I., Lanoue, A., and van der Putten, W. H. 2009. Plant defence against nematodes is not mediated by changes in the soil microbial community. Functional Ecology 23:488–495. doi/10.1111/j.1365-2435.2009.01543.x.WurstS.van BeersumS.WagenaarR.Bakx-SchotmanT.DrigoB.JanzikI.LanoueA.van der PuttenW. H.2009Plant defence against nematodes is not mediated by changes in the soil microbial communityFunctional Ecology2348849510.1111/j.1365-2435.2009.01543.xOpen DOISearch in Google Scholar
Yeates, G. W., Saggar, S., Denton, C. S., and Mercer, C. F. 1998. Impact of clover cyst nematode (Heterodera trifolii) infection on soil microbial activity in the rhizosphere of white clover (Trifolium repens) - a pulse-labelling experiment. Nematologia 44: 81–90.YeatesG. W.SaggarS.DentonC. S.MercerC. F.1998Impact of clover cyst nematode (Heterodera trifolii) infection on soil microbial activity in the rhizosphere of white clover (Trifolium repens) - a pulse-labelling experimentNematologia448190Search in Google Scholar
Yeates, G. W., Saggar, S., Hedley, C. B., and Mercer, C.F. 1999. Increase in 14C-carbon translocation to the soil microbial biomass when five species of plant-parasitic nematodes infect roots of white clover. Nematology 1:295–300.YeatesG. W.SaggarS.HedleyC. B.MercerC.F.1999Increase in 14C-carbon translocation to the soil microbial biomass when five species of plant-parasitic nematodes infect roots of white cloverNematology1295300Search in Google Scholar
Xiaolong, C., Lingling, G., Xiaopeng, D., Yongfeng, Y., Jianwei, W., Zhan, Z., Yongzhan, C., Feiyan, H., Min, Y., Wenjie, T., and Lei, Y. 2022. Effects of Meloidogyne incognita on the fungal community in tobacco rhizosphere. Revista Brasileira de Ciência do Solo 46:e0210127. doi/10.36783/18069657rbcs20210127.XiaolongC.LinglingG.XiaopengD.YongfengY.JianweiW.ZhanZ.YongzhanC.FeiyanH.MinY.WenjieT.LeiY.2022Effects of Meloidogyne incognita on the fungal community in tobacco rhizosphereRevista Brasileira de Ciência do Solo46e021012710.36783/18069657rbcs20210127Open DOISearch in Google Scholar
Zahid, M. I., Gurr, G. M., Nikandrowb, A., Hoddac, M., Fulkersond, W. J., and Nicol, H. I. 2002. Effects of root-and stolon-infecting fungi on root-colonizing nematodes of white clover. Plant Pathology 51:242–250. doi/10.1046/j.1365-3059.2002.00686.x.ZahidM. I.GurrG. M.NikandrowbA.HoddacM.FulkersondW. J.NicolH. I.2002Effects of root-and stolon-infecting fungi on root-colonizing nematodes of white cloverPlant Pathology5124225010.1046/j.1365-3059.2002.00686.xOpen DOISearch in Google Scholar