This work is licensed under the Creative Commons Attribution 4.0 International License.
Swarup, G., and Gupta P. 1971. On the earcockle and tundu diseases of wheat. II. Studies on Anguina tritici (Steinbuch, 1799) Filipjev, 1936 and Corynebacterium tritici (Hutch.) Burkh. Indian Phytopathology 24:359–365.SwarupG.GuptaP.1971On the earcockle and tundu diseases of wheat. II. Studies on Anguina tritici (Steinbuch, 1799) Filipjev, 1936 and Corynebacterium tritici (Hutch.) Burkh24359365Search in Google Scholar
Wasmuth, J., Schmid, R., Hedley, A., and Blaxter, M. 2008. On the extent and origins of genic novelty in the phylum Nematoda. PLOS Neglected Tropical Diseases 2(7):e258.WasmuthJ.SchmidR.HedleyA.BlaxterM.2008On the extent and origins of genic novelty in the phylum Nematoda27e258Search in Google Scholar
Limber, D.P. (1973). Notes on the longevity of Anguina tritici (Steinbuch, 1799) Filipjev, 1936, and its ability to invade wheat seedlings after thirty-two years of dormancy. Proceedings of the Helminthological Society, Volume 40, Number 2, July 1973.LimberD.P.1973Notes on the longevity of Anguina tritici (Steinbuch, 1799) Filipjev, 1936, and its ability to invade wheat seedlings after thirty-two years of dormancy402July1973Search in Google Scholar
Joshi, I., Kumar, A., Singh, A. K., Kohli, D., Raman, K. V., Sirohi, A., Chaudhury, A., and Jain, P. K. 2019. Development of nematode resistance in Arabidopsis by HD-RNAi-mediated silencing of the effector gene Mi-msp2. Scientific Reports 9:17404. https://doi.org/10.1038/s41598-019-53485-8.JoshiI.KumarA.SinghA. K.KohliD.RamanK. V.SirohiA.ChaudhuryA.JainP. K.2019Development of nematode resistance in Arabidopsis by HD-RNAi-mediated silencing of the effector gene Mi-msp2917404https://doi.org/10.1038/s41598-019-53485-8.Search in Google Scholar
Thomas, J. C., Khoury, R., Neeley, C. K., Akroush, A. M., and Davies, E. C. 1997. A fast CTAB method of human DNA isolation for polymerase chain reaction applications. Biochemical Education 25(4):233–235.ThomasJ. C.KhouryR.NeeleyC. K.AkroushA. M.DaviesE. C.1997A fast CTAB method of human DNA isolation for polymerase chain reaction applications254233235Search in Google Scholar
Masella, A. P., Bartram, A. K., Truszkowski, J. M., Brown, D. G., and Neufeld, J. D. 2012. PANDAseq: Paired-end Assembler for Illumina sequences. BMC Bioinformatics 13(1):31.MasellaA. P.BartramA. K.TruszkowskiJ. M.BrownD. G.NeufeldJ. D.2012PANDAseq: Paired-end Assembler for Illumina sequences13131Search in Google Scholar
Bolger, A. M., Lohse, M., and Usadel, B. 2014. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics 30(15):2114–2120.BolgerA. M.LohseM.UsadelB.2014Trimmomatic: a flexible trimmer for Illumina sequence data301521142120Search in Google Scholar
Simpson, J. T., Wong, K., Jackman, S. D., Schein, J. E., Jones, S. J., and Birol, I. 2009. ABySS: A parallel assembler for short read sequence data. Genome Research 19:1117–1123.SimpsonJ. T.WongK.JackmanS. D.ScheinJ. E.JonesS. J.BirolI.2009ABySS: A parallel assembler for short read sequence data1911171123Search in Google Scholar
Robert, M. W., Mathieu S., Felipe, A., Simão, M., Manni, P. I., Guennadi, K., Evgenia, V. K., and Evgeny M. Z. 2017. BUSCO applications from quality assessments to gene prediction and phylogenomics. Molecular Biology and Evolution 35(3):543–548.RobertM. W.MathieuS.FelipeA.SimãoM.ManniP. I.GuennadiK.EvgeniaV. K.EvgenyM. Z.2017BUSCO applications from quality assessments to gene prediction and phylogenomics353543548Search in Google Scholar
Stanke, M., Steinkamp, R., Waack, S., and Morgenstern, B. 2004. AUGUSTUS: a web server for gene finding in eukaryotes. Nucleic Acids Research 32:W309–W312.StankeM.SteinkampR.WaackS.MorgensternB.2004AUGUSTUS: a web server for gene finding in eukaryotes32W309W312Search in Google Scholar
Yuzhen, Y., Choi, J. H., and Haixu, T. 2011. RAPSearch: a fast protein similarity search tool for short reads. BMC Bioinformatics 12:159.YuzhenY.ChoiJ. H.HaixuT.2011RAPSearch: a fast protein similarity search tool for short reads12159Search in Google Scholar
Sato, K., Kadota, Y., Gan, P., Bino, T., Uehara, T., Yamaguchi, K., and Shirasu, K. 2018. High-quality genome sequence of the root-knot nematode Meloidogyne arenaria genotype A2-O. Genome Announcements 6(26).SatoK.KadotaY.GanP.BinoT.UeharaT.YamaguchiK.ShirasuK.2018High-quality genome sequence of the root-knot nematode Meloidogyne arenaria genotype A2-O626Search in Google Scholar
Nyaku, S. T., Sripathi, V. R., Kantety, R. V., Cseke, S. B., Buyyarapu, R., Mc Ewan, R., and Sharma, G. C. 2014. Characterization of the reniform nematode genome by shotgun sequencing. Genome 57(4): 209–221.NyakuS. T.SripathiV. R.KantetyR. V.CsekeS. B.BuyyarapuR.Mc EwanR.SharmaG. C.2014Characterization of the reniform nematode genome by shotgun sequencing574209221Search in Google Scholar
Kikuchi, T., Cotton, J.A., Dalzell, J.J., Hasegawa, K., Kanzaki, N., McVeigh, P., Takanashi, T., Tsai, I.J., Assefa, S.A., Cock, P.J. and Otto, T.D. 2011. Genomic insight into the origin of parasitism in the emerging plant pathogen Bursaphelenchus xylophilus. PLoS Pathogen 7(9), p.e1002219.KikuchiT.CottonJ.A.DalzellJ.J.HasegawaK.KanzakiN.McVeighP.TakanashiT.TsaiI.J.AssefaS.A.CockP.J.OttoT.D.2011Genomic insight into the origin of parasitism in the emerging plant pathogen Bursaphelenchus xylophilus79e1002219Search in Google Scholar
Quist, C. W., Smant, G., and Helder, J. 2015. Evolution of plant parasitism in the phylum Nematoda. Annual Review of Phytopathology 53:289–310. doi: 10.1146/annurev-phyto-080614-120057. PMID: 26047569QuistC. W.SmantG.HelderJ.2015Evolution of plant parasitism in the phylum Nematoda5328931010.1146/annurev-phyto-080614-12005726047569Open DOISearch in Google Scholar
Mimee, B., Lord, E., Véronneau, P. Y., Masonbrink, R., Yu, Q., and Akker, S. E. D. 2019. The draft genome of Ditylenchus dipsaci. Journal of Nematology 51:1–3. doi: 10.21307/jofnem-2019-027. PMID: 31132003; PMCID: PMC6929663MimeeB.LordE.VéronneauP. Y.MasonbrinkR.YuQ.AkkerS. E. D.2019The draft genome of Ditylenchus dipsaci511310.21307/jofnem-2019-02731132003PMC6929663Open DOISearch in Google Scholar
Blanc-Mathieu, R., Perfus-Barbeoch, L., Aury, J.M., Da Rocha, M., Gouzy, J., Sallet, E., Martin-Jimenez, C., Bailly-Bechet, M., Castagnone-Sereno, P., Flot, J.F. and Kozlowski, D.K. 2017. Hybridization and polyploidy enable genomic plasticity without sex in the most devastating plant-parasitic nematodes. PLoS Genetics 13(6):e1006777. https://doi.org/10.1371/journal.pgen.1006777Blanc-MathieuR.Perfus-BarbeochL.AuryJ.M.Da RochaM.GouzyJ.SalletE.Martin-JimenezC.Bailly-BechetM.Castagnone-SerenoP.FlotJ.F.KozlowskiD.K.2017Hybridization and polyploidy enable genomic plasticity without sex in the most devastating plant-parasitic nematodes136e1006777https://doi.org/10.1371/journal.pgen.1006777Search in Google Scholar
Burke, M., Scholl, E. H., Bird, D. M., Schaff, J. E., Colman, S. D., Crowell, R., Diener, S., Gordon, O., Graham, S., Wang, X., Windham, E., Wright, G. M., and Opperman, C. H. 2015. The plant parasite Pratylenchus coffeae carries a minimal nematode genome. Nematology 17(6):621–637. doi: https://doi.org/10.1163/15685411-00002901BurkeM.SchollE. H.BirdD. M.SchaffJ. E.ColmanS. D.CrowellR.DienerS.GordonO.GrahamS.WangX.WindhamE.WrightG. M.OppermanC. H.2015The plant parasite Pratylenchus coffeae carries a minimal nematode genome176621637doi: https://doi.org/10.1163/15685411-00002901Search in Google Scholar
Zheng, J., Peng, D., Chen, L., Liu, H., Chen, F., Xu, M., and Sun, M. 2016. The Ditylenchus destructor genome provides new insights into the evolution of plant parasitic nematodes. Proceedings of the Royal Society B: Biological Sciences 283(1835):20160942.ZhengJ.PengD.ChenL.LiuH.ChenF.XuM.SunM.2016The Ditylenchus destructor genome provides new insights into the evolution of plant parasitic nematodes283183520160942Search in Google Scholar
Lai, C.K., Lee, Y.C., Ke, H.M., Lu, M.R., Liu, W.A., Lee, H.H., Liu, Y.C., Yoshiga, T., Kikuchi, T., Chen, P.J. and Tsai, I.J. 2023. The Aphelenchoides genomes reveal substantial horizontal gene transfers in the last common ancestor of free-living and major plant parasitic nematodes. Molecular Ecology Resources 23(4):905–919.LaiC.K.LeeY.C.KeH.M.LuM.R.LiuW.A.LeeH.H.LiuY.C.YoshigaT.KikuchiT.ChenP.J.TsaiI.J.2023The Aphelenchoides genomes reveal substantial horizontal gene transfers in the last common ancestor of free-living and major plant parasitic nematodes234905919Search in Google Scholar
Ji, H., Xie, J., Han, Z., Yang, F., Yu, W., Peng, Y., and Qing, X. 2023. Complete genome sequencing of nematode Aphelenchoides besseyi, an economically important pest causing rice white-tip disease. Phytopathology Research 5(1):1–13.JiH.XieJ.HanZ.YangF.YuW.PengY.QingX.2023Complete genome sequencing of nematode Aphelenchoides besseyi, an economically important pest causing rice white-tip disease51113Search in Google Scholar
van Megen, H., van den Elsen, S., Holterman, M., Karssen, G., Mooyman, P., Bongers, T., Holovachov, O., Bakker, J. and Helder, J. 2009. A phylogenetic tree of nematodes based on about 1200 full-length small subunit ribosomal DNA sequences. Nematology 11(6):927–950.van MegenH.van den ElsenS.HoltermanM.KarssenG.MooymanP.BongersT.HolovachovO.BakkerJ.HelderJ.2009A phylogenetic tree of nematodes based on about 1200 full-length small subunit ribosomal DNA sequences116927950Search in Google Scholar
Cralley, E. M. 1949. White tip of rice. Phytopathology 39:5.CralleyE. M.1949White tip of rice395Search in Google Scholar
Yoshi, H., and Yamamoto, S. 1950. A rice nematode disease “Sencha Shingane Byo”. II. hibernation of Aphelenchoides oryzae. Journal of Faculty of Agriculture, Kyusha University 9:223–233.YoshiH.YamamotoS.1950A rice nematode disease “Sencha Shingane Byo”. II. hibernation of Aphelenchoides oryzae9223233Search in Google Scholar