This work is licensed under the Creative Commons Attribution 4.0 International License.
Cinkornpumin, J. K., Wisidagama, D. R., Rapoport, V., Go, J. L., Dieterich, C., Wang, X., Sommer, R. J. and Hong, R. L. 2014. A host beetle pheromone regulates development and behavior in the nematode Pristionchus pacificus. eLife 3:e03229, doi: 10.7554/eLife.03229.CinkornpuminJ. K.WisidagamaD. R.RapoportV.GoJ. L.DieterichC.WangX.SommerR. J. and HongR. L.2014.A host beetle pheromone regulates development and behavior in the nematode Pristionchus pacificus.3:e03229, doi:10.7554/eLife.03229.427028825317948Open DOISearch in Google Scholar
Ekino, T., Yoshiga, T., Takeuchi-Kaneko, Y. and Kanzaki, N. 2017. Transmission electron microscopic observation of body cuticle structures of phoretic and parasitic stages of Parasitaphelenchinae nematodes. PLoS ONE 12:e0179465, doi: 10.1371/journal.pone.0179465.EkinoT.YoshigaT.Takeuchi-KanekoY. and KanzakiN.2017.Transmission electron microscopic observation of body cuticle structures of phoretic and parasitic stages of Parasitaphelenchinae nematodes.12:e0179465, doi:10.1371/journal.pone.0179465.547357528622353Open DOISearch in Google Scholar
Giblin-Davis, R. M., Ye, W., Kanzaki, N., Williams, D., Morris, K. and Thomas, W. K. 2006. Stomatal ultrastructure, molecular phylogeny, and description of Parasitodiplogaster laevigata n. sp. (Nematoda: Diplogastridae), a parasite of fig wasps from Ficus laevigata from Florida. Journal of Nematology 38:137–149.Giblin-DavisR. M.YeW.KanzakiN.WilliamsD.MorrisK. and ThomasW. K.2006.Stomatal ultrastructure, molecular phylogeny, and description of Parasitodiplogaster laevigata n. sp. (Nematoda: Diplogastridae), a parasite of fig wasps from Ficus laevigata from Florida.38:137–149.Search in Google Scholar
Herrmann, M., Mayer, W. E. and Sommer, R. J. 2006. Sex, bugs and Haldane’s rule: the nematode genus Pristionchus in the United States. Frontiers in Zoology 3:14, doi: 10.1186/1742-9994-3-14.HerrmannM.MayerW. E. and SommerR. J.2006.Sex, bugs and Haldane’s rule: the nematode genus Pristionchus in the United States.3:14, doi:10.1186/1742-9994-3-14.157855716968539Open DOISearch in Google Scholar
Herrmann, M., Kienle, S., Rochat, J., Mayer, W. and Sommer, R. J. 2010. Haplotype diversity of the nematode Pristionchus pacificus on Réunion in the Indian Ocean suggests multiple independent invasions. Biological Journal of the Linnean Society 100:170–179, doi: 10.1111/j.1095-8312.2010.01410.x.HerrmannM.KienleS.RochatJ.MayerW. and SommerR. J.2010.Haplotype diversity of the nematode Pristionchus pacificus on Réunion in the Indian Ocean suggests multiple independent invasions.100:170–179, doi:10.1111/j.1095-8312.2010.01410.x.Open DOISearch in Google Scholar
Herrmann, M., Neuner, J., Voetsch, M., Wörner, J., Kanzaki, N. and Sommer, R. J. 2015. Pristionchus Scratchpads – an online platform for taxonomy, systematics and phylogeny. Zootaxa 3949:597–600, doi: 10.11646/zootaxa.3949.4.10.HerrmannM.NeunerJ.VoetschM.WörnerJ.KanzakiN. and SommerR. J.2015.Pristionchus Scratchpads – an online platform for taxonomy, systematics and phylogeny.3949:597–600, doi:10.11646/zootaxa.3949.4.10.25947829Open DOISearch in Google Scholar
Hooper, D. J. 1986. “Handling, fixing, staining and mounting nematodes”, In Southey, J. F. (Ed.), Laboratory Methods for Work with Plant and Soil Nematodes Her Majesty’s Stationery Office, London, pp. 59–80.HooperD. J.1986. “Handling, fixing, staining and mounting nematodes”, InSoutheyJ. F.(Ed.),Her Majesty’s Stationery Office,London, pp.59–80.Search in Google Scholar
Huelsenbeck, J. P. and Ronquist, F. 2001. MR BAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17:1754–1755, doi: 10.1093/bioinformatics/17.8.754.HuelsenbeckJ. P. and RonquistF.2001.MR BAYES: Bayesian inference of phylogenetic trees.17:1754–1755, doi:10.1093/bioinformatics/17.8.754.11524383Open DOISearch in Google Scholar
Kanzaki, N. and Futai, K. 2002. A PCR primer set for determination of phylogenetic relationships of Bursaphelenchus species within xylophilus group. Nematology 4:35–41, doi: 10.1163/156854102760082186.KanzakiN. and FutaiK.2002.A PCR primer set for determination of phylogenetic relationships of Bursaphelenchus species within xylophilus group.4:35–41, doi:10.1163/156854102760082186.Open DOISearch in Google Scholar
Kanzaki, N., Giblin-Davis, R. M. and Ragsdale, E. J. 2015. Allodiplogaster josephi n. sp. and A. seani n. sp. (Nematoda: Diplogastridae), associates of soil-dwelling bees in the eastern USA. Nematology 17:831–863, doi: 10.1163/15685411-00002908.KanzakiN.Giblin-DavisR. M. and RagsdaleE. J.2015.Allodiplogaster josephi n. sp. and A. seani n. sp. (Nematoda: Diplogastridae), associates of soil-dwelling bees in the eastern USA.17:831–863, doi:10.1163/15685411-00002908.Open DOISearch in Google Scholar
Kanzaki, N., Taki, H., Masuya, H. and Okabe, K. 2014. Isolation of Pristionchus bucculentus from the large mushroom beetle, Encaustes praenobilis. Bulletin of Forestry and Forest Products Research Institute 13:27–28.KanzakiN.TakiH.MasuyaH. and OkabeK.2014.Isolation of Pristionchus bucculentus from the large mushroom beetle, Encaustes praenobilis.13:27–28.Search in Google Scholar
Kanzaki, N., Ragsdale, E. J., Herrmann, M. and Sommer, R. J. 2012. Two new species of Pristionchus (Rhabditida: Diplogastridae): P. fissidentatus n. sp. from Nepal and La Réunion Island and P. elegans n. sp. from Japan. Journal of Nematology 44:80–91.KanzakiN.RagsdaleE. J.HerrmannM. and SommerR. J.2012.Two new species of Pristionchus (Rhabditida: Diplogastridae): P. fissidentatus n. sp. from Nepal and La Réunion Island and P. elegans n. sp. from Japan.44:80–91.Search in Google Scholar
Kanzaki, N., Ragsdale, E. J., Herrmann, M., Röseler, W. and Sommer, R. J. 2013. Pristionchus bucculentus n. sp. (Rhabditida: Diplogastridae) isolated from a shining mushroom beetle (Coleoptera: Scaphidiidae) in Hokkaido, Japan. Journal of Nematology 45:78–86.KanzakiN.RagsdaleE. J.HerrmannM.RöselerW. and SommerR. J.2013.Pristionchus bucculentus n. sp. (Rhabditida: Diplogastridae) isolated from a shining mushroom beetle (Coleoptera: Scaphidiidae) in Hokkaido, Japan.45:78–86.Search in Google Scholar
Kanzaki, N., Masuya, H., Ichihara, Y., Maehara, N., Aikawa, T., Ekino, T. and Ide, T. 2019. Bursaphelenchus carpini n. sp., B. laciniatae n. sp. and B. cryphali okhotskensis n. subsp. (Nematoda: Aphelenchoididae) isolated from Japan. Nematology 21:361–388, doi: 10.1163/15685411-00003220.KanzakiN.MasuyaH.IchiharaY.MaeharaN.AikawaT.EkinoT. and IdeT.2019.Bursaphelenchus carpini n. sp., B. laciniatae n. sp. and B. cryphali okhotskensis n. subsp. (Nematoda: Aphelenchoididae) isolated from Japan.21:361–388, doi:10.1163/15685411-00003220.Open DOISearch in Google Scholar
Kanzaki, N., Herrmann, M., Weiler, C., Röseler, W., Theska, T., Berger, J., Rödelsperger, C. and Sommer, R. J. 2021. Nine new Pristionchus (Nematoda: Diplogastridae) species from China. Zootaxa 4943:1–66, doi: 10.11646/zootaxa.4943.1.KanzakiN.HerrmannM.WeilerC.RöselerW.TheskaT.BergerJ.RödelspergerC. and SommerR. J.2021.Nine new Pristionchus (Nematoda: Diplogastridae) species from China.4943:1–66, doi:10.11646/zootaxa.4943.1.Open DOISearch in Google Scholar
Katoh, K., Misawa, K., Kuma, K. and Miyata, T. 2002. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Research 30:3059–3066, doi: 10.1093/nar/gkf436.KatohK.MisawaK.KumaK. and MiyataT.2002.MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform.30:3059–3066, doi:10.1093/nar/gkf436.13575612136088Open DOISearch in Google Scholar
Kikuchi, T., Aikawa, T., Oeda, Y., Karim, N. and Kanzaki, N. 2009. A rapid and precise diagnostic method for detecting the pinewood nematode Bursaphelenchus xylophilus by loop-mediated isothermal amplification (LAMP). Phytopathology 99:1365–1369.KikuchiT.AikawaT.OedaY.KarimN. and KanzakiN.2009.A rapid and precise diagnostic method for detecting the pinewood nematode Bursaphelenchus xylophilus by loop-mediated isothermal amplification (LAMP).99:1365–1369.10.1094/PHYTO-99-12-136519900002Search in Google Scholar
Kreis, H. A. 1932. Beiträge zur Kenntnis pflanzenparasitischer Nematoden. Zeitschrift für Parasitenkunde 5:184–194.KreisH. A.1932.Beiträge zur Kenntnis pflanzenparasitischer Nematoden.5:184–194.10.1007/BF02120641Search in Google Scholar
Kumar, S., Stecher, G., Li, M., Knyaz, C. and Tamura, K. 2018. MEGA X: molecular evolutionary genetics analysis across computing platforms. Molecular Biology and Evolution 35:1547–1549, doi: 10.1093/molbev/msy096.KumarS.StecherG.LiM.KnyazC. and TamuraK.2018.MEGA X: molecular evolutionary genetics analysis across computing platforms.35:1547–1549, doi:10.1093/molbev/msy096.596755329722887Open DOISearch in Google Scholar
Kuraku, S., Zmasek, C. M., Nishimura, O. and Katoh, K. 2013. aLeaves facilitates on-demand exploration of metazoan gene family trees on MAFFT sequence alignment server with enhanced interactivity. Nucleic Acids Research 41:W22–W28, doi: 10.1093/nar/gkt389.KurakuS.ZmasekC. M.NishimuraO. and KatohK.2013.aLeaves facilitates on-demand exploration of metazoan gene family trees on MAFFT sequence alignment server with enhanced interactivity.41:W22–W28, doi:10.1093/nar/gkt389.369210323677614Open DOISearch in Google Scholar
Larget, B. and Simon, D. L. 1999. Markov chain Monte Carlo algorithms for the Bayesian analysis of phylogenetic trees. Molecular Biology and Evolution 16:750–759, doi: 10.1093/oxfordjournals.molbev.a026160.LargetB. and SimonD. L.1999.Markov chain Monte Carlo algorithms for the Bayesian analysis of phylogenetic trees.16:750–759, doi:10.1093/oxfordjournals.molbev.a026160.Open DOISearch in Google Scholar
Lightfoot, J. W., Wilecki, M., Rödelsperger, C., Moreno, E., Susoy, V., Witte, H. and Sommer, R. J. 2019. Small peptide–mediated self-recognition prevents cannibalism in predatory nematodes. Science 364:86–89, doi: 10.1126/science.aav9856.LightfootJ. W.WileckiM.RödelspergerC.MorenoE.SusoyV.WitteH. and SommerR. J.2019.Small peptide–mediated self-recognition prevents cannibalism in predatory nematodes.364:86–89, doi:10.1126/science.aav9856.30948551Open DOISearch in Google Scholar
Mayer, W. E., Herrmann, M. and Sommer, R. J. 2007. Phylogeny of the nematode genus Pristionchus and implications for biodiversity, biogeography and the evolution of hermaphroditism. BMC Evolutionary Biology 7:104, doi: 10.1186/1471-2148-7-104.MayerW. E.HerrmannM. and SommerR. J.2007.Phylogeny of the nematode genus Pristionchus and implications for biodiversity, biogeography and the evolution of hermaphroditism.7:104, doi:10.1186/1471-2148-7-104.192905717605767Open DOISearch in Google Scholar
Minagawa, N. and Mizukubo, T. 1994. A simplified procedure of transferring nematodes to glycerol for permanent mounts. Japanese Journal of Nematology 24:75, doi: 10.3725/jjn1993.24.2_75.MinagawaN. and MizukuboT.1994.A simplified procedure of transferring nematodes to glycerol for permanent mounts.24:75, doi:10.3725/jjn1993.24.2_75.Open DOISearch in Google Scholar
Morgan, K., McGaughran, A., Ganeshan, S., Herrmann, M. and Sommer, R. J. 2014. Landscape and oceanic barriers shape dispersal and population structure in the Island nematode Pristionchus pacificus. Biological Journal of the Linnean Society 112:1–15, doi: 10.1111/bij.12255.MorganK.McGaughranA.GaneshanS.HerrmannM. and SommerR. J.2014.Landscape and oceanic barriers shape dispersal and population structure in the Island nematode Pristionchus pacificus.112:1–15, doi:10.1111/bij.12255.Open DOISearch in Google Scholar
Poinar, G. O. Jr 1979. Parasitodiplogaster sycophilon gen. n., sp. n. (Diplogasteridae: Nematoda), a parasite of Elisabethiella stuckenbergi Grandi (Agaonidae: Hymenoptera) in Rhodesia. Proceedings of the Koninklijke Nederlandse Akademie van Wetenschappen, Series C, Biological and Medical Sciences 82:375–381.PoinarG. O.Jr1979.Parasitodiplogaster sycophilon gen. n., sp. n. (Diplogasteridae: Nematoda), a parasite of Elisabethiella stuckenbergi Grandi (Agaonidae: Hymenoptera) in Rhodesia.82:375–381.Search in Google Scholar
Ragsdale, E. J., Kanzaki, N. and Herrmann, M. 2015. “Taxonomy and natural history: the genus Pristionchus”, In Sommer, R. J., Hunt, D. J. and Perry, R. N. (Eds), Pristionchus Pacificus – a Nematode Model for Comparative and Evolutionary Biology. Nematology Monographs and Perspectives vol. 11 Brill, Leiden, pp. 77–120.RagsdaleE. J.KanzakiN. and HerrmannM.2015. “Taxonomy and natural history: the genus Pristionchus”, InSommerR. J.HuntD. J. and PerryR. N.(Eds),Brill,Leiden, pp.77–120.Search in Google Scholar
Ragsdale, E. J., Müller, M. R., Rödelsperger, C. and Sommer, R. J. 2013. A developmental switch coupled to the evolution of plasticity acts through a sulfatase. Cell 155:922–933, doi: 10.1016/j.cell.2013.09.054.RagsdaleE. J.MüllerM. R.RödelspergerC. and SommerR. J.2013.A developmental switch coupled to the evolution of plasticity acts through a sulfatase.155:922–933, doi:10.1016/j.cell.2013.09.054.24209628Open DOISearch in Google Scholar
Renahan, T., Lo, W. -S., Werner, M. S., Rochat, J., Herrmann, M. and Sommer, R. J. 2021. Nematode biphasic “boom and bust” dynamics are dependent on host bacterial load while linking dauer and mouth-form polyphenisms. Environmental Microbiology 23, doi: 10.1111/1462-2920.15438.RenahanT.LoW. -S.WernerM. S.RochatJ.HerrmannM. and SommerR. J.2021.Nematode biphasic “boom and bust” dynamics are dependent on host bacterial load while linking dauer and mouth-form polyphenisms.23, doi:10.1111/1462-2920.15438.33587771Open DOISearch in Google Scholar
Rödelsperger, C., Röseler, W., Prabh, N., Yoshida, K., Weiler, C., Herrmann, M. and Sommer, R. J. 2018. Phylotranscriptomics of Pristionchus nematodes reveals parallel gene loss in six hermaphroditic lineages. Current Biology 28:3123–3127, doi: 10.1016/j.cub.2018.07.041.RödelspergerC.RöselerW.PrabhN.YoshidaK.WeilerC.HerrmannM. and SommerR. J.2018.Phylotranscriptomics of Pristionchus nematodes reveals parallel gene loss in six hermaphroditic lineages.28:3123–3127, doi:10.1016/j.cub.2018.07.041.30245109Open DOISearch in Google Scholar
Ronquist, F., Teslenko, M., van der Mark, P., Ayres, D. L., Darling, A., Höhna, S., Larget, B., Liu, L., Suchard, M. A. and Huelsenbeck, J. P. 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 61:539–542, doi: 10.1093/sysbio/sys029.RonquistF.TeslenkoM.van der MarkP.AyresD. L.DarlingA.HöhnaS.LargetB.LiuL.SuchardM. A. and HuelsenbeckJ. P.2012.MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space.61:539–542, doi:10.1093/sysbio/sys029.332976522357727Open DOISearch in Google Scholar
Skrjabin, K. I., Shikobalova, N. P., Sobolev, A. A., Paramonov, A. A. and Sudarikov, A. A. 1954. Camellanata, Rhabditata, Tylenchata, Trichocephalata and Dioctophymata and the distribution of parasitic nematodes by hosts. Izdatel’stvo Akademii Nauk SSSR (Moskva) 4:1–927 (in Russian).SkrjabinK. I.ShikobalovaN. P.SobolevA. A.ParamonovA. A. and SudarikovA. A.1954.Camellanata, Rhabditata, Tylenchata, Trichocephalata and Dioctophymata and the distribution of parasitic nematodes by hosts.4:1–927(in Russian).Search in Google Scholar
Sommer, R. J. 2009. The future of evo–devo: model systems and evolutionary theory. Nature Reviews Genetics 10:416–422, doi: 10.1038/nrg2567.SommerR. J.2009.The future of evo–devo: model systems and evolutionary theory.10:416–422, doi:10.1038/nrg2567.19369972Open DOISearch in Google Scholar
Sommer, R. J. 2015. “Integrative evolutionary biology and mechanistic approaches in comparative biology”, In Sommer, R. J., Hunt, D. J. and Perry, R. N. (Eds), Pristionchus Pacificus – a Nematode Model for Comparative and Evolutionary Biology. Nematology monographs and perspectives vol. 11 Brill, Leiden, pp. 19–41.SommerR. J.2015. “Integrative evolutionary biology and mechanistic approaches in comparative biology”, InSommerR. J.HuntD. J. and PerryR. N.(Eds),Brill,Leiden, pp.19–41.Search in Google Scholar
Sommer, R. J., Carta, L. K., Kim, S. -Y. and Sternberg, P. W. 1996. Morphological, genetic and molecular description of Pristionchus pacificus sp. n. (Nematoda, Diplogastridae). Fundamental and Applied Nematology 19:511–521.SommerR. J.CartaL. K.KimS. -Y. and SternbergP. W.1996.Morphological, genetic and molecular description of Pristionchus pacificus sp. n. (Nematoda, Diplogastridae).19:511–521.Search in Google Scholar
Sudhaus, W. and Fürst von Lieven, A. 2003. Phylogenetic classification of the Diplogastridae (Secernentea, Nematoda). Journal of Nematode Morphology and Systematics 6:43–90.SudhausW. and Fürst von LievenA.2003.Phylogenetic classification of the Diplogastridae (Secernentea, Nematoda).6:43–90.Search in Google Scholar
Susoy, V., Ragsdale, E. J., Kanzaki, N. and Sommer, R. J. 2015. Rapid diversification associated with a macroevolutionary pulse of developmental plasticity. eLife 4:e05463, doi: 10.7554/eLife.05463.SusoyV.RagsdaleE. J.KanzakiN. and SommerR. J.2015.Rapid diversification associated with a macroevolutionary pulse of developmental plasticity.4:e05463, doi:10.7554/eLife.05463.435728725650739Open DOISearch in Google Scholar
Susoy, V., Herrmann, M., Kanzaki, N., Kruger, M., Nguyen, C. N., Rödelsperger, C., Röseler, W., Weiler, C., Giblin-Davis, R. M., Ragsdale, E. J. and Sommer, R. J. 2016. Large-scale diversification without genetic isolation in nematode symbionts of figs. Science Advances 2:e1501031, doi: 10.1126/sciadv.1501031.SusoyV.HerrmannM.KanzakiN.KrugerM.NguyenC. N.RödelspergerC.RöselerW.WeilerC.Giblin-DavisR. M.RagsdaleE. J. and SommerR. J.2016.Large-scale diversification without genetic isolation in nematode symbionts of figs.2:e1501031, doi:10.1126/sciadv.1501031.473085526824073Open DOISearch in Google Scholar
Tanaka, R., Kikuchi, T., Aikawa, T. and Kanzaki, N. 2012. Simple and quick methods for nematode DNA preparation. Applied Entomology and Zoology 47:291–294, doi: 10.1007/s13355-012-0115-9.TanakaR.KikuchiT.AikawaT. and KanzakiN.2012.Simple and quick methods for nematode DNA preparation.47:291–294, doi:10.1007/s13355-012-0115-9.Open DOISearch in Google Scholar
Wöhr, M., Greeff, J. M., Kanzaki, N., Ye, W. and Giblin-Davis, R. M. 2014. Molecular and morphological observations of Parasitodiplogaster sycophilon Poinar 1979 (Nematoda: Diplogastrina) associated with Ficus burkei in Africa. Nematology 16:453–462, doi: 10.1163/15685411-00002777.WöhrM.GreeffJ. M.KanzakiN.YeW. and Giblin-DavisR. M.2014.Molecular and morphological observations of Parasitodiplogaster sycophilon Poinar 1979 (Nematoda: Diplogastrina) associated with Ficus burkei in Africa.16:453–462, doi:10.1163/15685411-00002777.Open DOISearch in Google Scholar
Ye, W., Giblin-Davis, R. M., Braasch, H., Morris, K. and Thomas, W. K. 2007. Phylogenetic relationships among Bursaphelenchus species (Nematoda: Parasitaphelenchidae) inferred from nuclear ribosomal and mitochondrial DNA sequence data. Molecular Phylogenetics and Evolution 43:1185–1197, doi: 10.1016/j.ympev.2007.02.006.YeW.Giblin-DavisR. M.BraaschH.MorrisK. and ThomasW. K.2007.Phylogenetic relationships among Bursaphelenchus species (Nematoda: Parasitaphelenchidae) inferred from nuclear ribosomal and mitochondrial DNA sequence data.43:1185–1197, doi:10.1016/j.ympev.2007.02.006.17433722Open DOISearch in Google Scholar