An Agent-Based Metapopulation Model Simulating Virus-Based Biocontrol of Heterodera Glycines

Alizon, S., Hurford, A., Mideo, N., and van Baalen, M.. 2009. Virulence evolution and the trade-off hypothesis: History, current state of affairs and the future. Journal of Evolutionary Biology 22: 245-259. Alizon S. Hurford A. Mideo N. , and van Baalen M. . 2009 . Virulence evolution and the trade-off hypothesis: History, current state of affairs and the future . Journal of Evolutionary Biology 22 : 245 - 259 . 10.1111/j.1420-9101.2008.01658.x Search in Google Scholar

Anderson, R., and May, R.. 1982. Coevolution of host and parasites. Parasitology 85: 411-426. Anderson R. , and May R. . 1982 . Coevolution of host and parasites . Parasitology 85 : 411 - 426 . 10.1017/S0031182000055360 Search in Google Scholar

Bekal, S., Domier, L. L., Gonfa, B., McCoppin, N. K., Lambert, K. N., and Bhalerao, K.. 2014. A novel flavivirus in the soybean cyst nematode. Journal of General Virology 95: 1272-1280. Bekal S. Domier L. L. Gonfa B. McCoppin N. K. Lambert K. N. , and Bhalerao K. . 2014 . A novel flavivirus in the soybean cyst nematode . Journal of General Virology 95 : 1272 - 1280 . 10.1099/vir.0.060889-0 Search in Google Scholar

Bekal, S., Domier, L. L., Niblack, T. L., and Lambert, K. N.. 2011. Discovery and initial analysis of novel viral genomes in the soybean cyst nematode. Journal of General Virology 92: 1870-1879. Bekal S. Domier L. L. Niblack T. L. , and Lambert K. N. . 2011 . Discovery and initial analysis of novel viral genomes in the soybean cyst nematode . Journal of General Virology 92 : 1870 - 1879 . 10.1099/vir.0.030585-0 Search in Google Scholar

Berngruber, T. W., Froissart, R., Choisy, M., and Gandon, S.. 2013. Evolution of virulence in emerging epidemics. PLoS Pathogens 9: e1003209. Berngruber T. W. Froissart R. Choisy M. , and Gandon S. . 2013 . Evolution of virulence in emerging epidemics . PLoS Pathogens 9 : e1003209 . 10.1371/journal.ppat.1003209 Search in Google Scholar

Brauer, F.. 2008. Compartmental models in epidemiology”, in Brauer, F., Wu, J., and van den Driessche, P. (Eds), Mathematical epidemiology, 1945, Springer, Berlin Heidelberg, 19-79. Brauer F. . 2008 . Compartmental models in epidemiology ”, in Brauer F. Wu J. , and van den Driessche P. (Eds), Mathematical epidemiology, 1945 , Springer , Berlin Heidelberg , 19 - 79 . Search in Google Scholar

Daniel, W.. 1990. Kolmogorov–Smirnov one-sample test. Pp. 319–330. in Applied Nonparametric Statistics, 2nd ed., PWS-Kent, Boston, MA. Daniel W. . 1990 . Kolmogorov–Smirnov one-sample test. Pp. 319–330. in Applied Nonparametric Statistics , 2nd ed. , PWS-Kent , Boston, MA . Search in Google Scholar

Demas, G. E., Greives, T., Chester, E., and French, S.. 2012. The energetics of immunity: mechanisms mediating trade-offs in ecoimmunology, in Demas, G. E., and Nelson, R. J. (Eds), Ecoimmunology, Oxford University Press, Oxford, UK, 259-296. Demas G. E. Greives T. Chester E. , and French S. . 2012 . The energetics of immunity: mechanisms mediating trade-offs in ecoimmunology , in Demas G. E. , and Nelson R. J. (Eds), Ecoimmunology , Oxford University Press , Oxford, UK , 259 - 296 . Search in Google Scholar

Fenner, F., and Ratcliffe, F.. 1965. Rabbit populations and myxoma virus. Science 150: 1146-1151. Fenner F. , and Ratcliffe F. . 1965 . Rabbit populations and myxoma virus . Science 150 : 1146 - 1151 . 10.1126/science.150.3700.1146.b Search in Google Scholar

Galvani, A. P.. 2003. Epidemiology meets evolutionary ecology. Trends in Ecology and Evolution 18: 132-139. Galvani A. P. . 2003 . Epidemiology meets evolutionary ecology . Trends in Ecology and Evolution 18 : 132 - 139 . 10.1016/S0169-5347(02)00050-2 Search in Google Scholar

Illinois State Climatologist’s Office 2014. Monthly data for station 118740 (Urbana, IL). Technical report Illinois State Climatologist’s Office Champaign, IL. Illinois State Climatologist’s Office 2014 . Monthly data for station 118740 (Urbana, IL) . Technical report Illinois State Climatologist’s Office Champaign, IL . Search in Google Scholar

Kerr, P. J., Ghedin, E., DePasse, J. V., Fitch, A., Cattadori, I. M., Hudson, P. J., Tscharke, D. C., Read, A. F., and Holmes, E. C.. 2012. Evoevolution history and attenuation of myxoma virus on two continents. PLoS Pathogens 8: 1-9. Kerr P. J. Ghedin E. DePasse J. V. Fitch A. Cattadori I. M. Hudson P. J. Tscharke D. C. Read A. F. , and Holmes E. C. . 2012 . Evoevolution history and attenuation of myxoma virus on two continents . PLoS Pathogens 8 : 1 - 9 . 10.1371/journal.ppat.1002950346422523055928 Search in Google Scholar

Koenning, S.. 2004. Population biology biology and management of soybean cyst nematode, Schmitt & Associates of Marceline, 73-110. Koenning S. . 2004 . Population biology biology and management of soybean cyst nematode , Schmitt & Associates of Marceline , 73 - 110 . Search in Google Scholar

Koenning, S. R., and Wrather, J. A.. 2010. Suppression of soybean yield potential in the continental united states by plant diseases from 2006 to 2009. Plant Health Progress, Pp. PHP–2010–1122–01–RS. Koenning S. R. , and Wrather J. A. . 2010 . Suppression of soybean yield potential in the continental united states by plant diseases from 2006 to 2009 . Plant Health Progress , Pp. PHP–2010–1122–01–RS . 10.1094/PHP-2010-1122-01-RS Search in Google Scholar

Kruskal, W., and Wallis, W.. 1952. Use of ranks in one-criterion variance analysis. Journal of the American Statistical Association 47: 583-621. Kruskal W. , and Wallis W. . 1952 . Use of ranks in one-criterion variance analysis . Journal of the American Statistical Association 47 : 583 - 621 . 10.1080/01621459.1952.10483441 Search in Google Scholar

Kurle, J., Malvick, D., Potter, B., and Orf, J.. 2011. Soybean Cyst Nematode Management Guide, University of Minnesota Extension, St. Paul. Kurle J. Malvick D. Potter B. , and Orf J. . 2011 . Soybean Cyst Nematode Management Guide , University of Minnesota Extension , St. Paul . Search in Google Scholar

Mackinnon, M. J., and Read, A. F.. 2004a. Immunity promotes virulence evolution in a malaria model. PLoS Biology 2: e230. Mackinnon M. J. , and Read A. F. . 2004a . Immunity promotes virulence evolution in a malaria model . PLoS Biology 2 : e230 . 10.1371/journal.pbio.002023043415315221031 Search in Google Scholar

Mackinnon, M. J., and Read, A. F.. 2004b. Virulence in malaria: an evolutionary viewpoint. Philosophical Transactions of the Royal Society Biological Sciences 359: 965-986. Mackinnon M. J. , and Read A. F. . 2004b . Virulence in malaria: an evolutionary viewpoint . Philosophical Transactions of the Royal Society Biological Sciences 359 : 965 - 986 . 10.1098/rstb.2003.1414169337515306410 Search in Google Scholar

Niblack, T. L., Lambert, K. N., and Tylka, G. L.. 2006. A model plant pathogen from the kingdom animalia: Heterodera glycines, the soybean cyst nematode. Annual Review of Phytopathology 44: 283-303. Niblack T. L. Lambert K. N. , and Tylka G. L. . 2006 . A model plant pathogen from the kingdom animalia: Heterodera glycines, the soybean cyst nematode . Annual Review of Phytopathology 44 : 283 - 303 . 10.1146/annurev.phyto.43.040204.14021816704359 Search in Google Scholar

Niblack, T., Colgrove, A., Colgrove, K., and Bond, J.. 2008. Shift in virulence of soybean cyst nematode is associated with use of resistance from PI 88788. Plant Health Progress, Pp. PHP–2008–0118–01–RS. Niblack T. Colgrove A. Colgrove K. , and Bond J. . 2008 . Shift in virulence of soybean cyst nematode is associated with use of resistance from PI 88788 . Plant Health Progress , Pp. PHP–2008–0118–01–RS . 10.1094/PHP-2008-0118-01-RS Search in Google Scholar

R Core Team 2013. R: A Language and environment for statistical computing. Vienna, Austria. R Core Team 2013 . R: A Language and environment for statistical computing . Vienna, Austria . Search in Google Scholar

Raberg, L., and Stjernman, M.. 2012. The evolutionary ecology of infectious disease virulence. Ecoimmunology, Oxford University Press, Oxford, 548-578. Raberg L. , and Stjernman M. . 2012 . The evolutionary ecology of infectious disease virulence . Ecoimmunology , Oxford University Press , Oxford , 548 - 578 . Search in Google Scholar

Rock, K., Brand, S., Moir, J., and Keeling, M. J.. 2014. Dynamics of infectious diseases. Reports on Progress in Physics 77: 026602. Rock K. Brand S. Moir J. , and Keeling M. J. . 2014 . Dynamics of infectious diseases . Reports on Progress in Physics 77 : 026602 . 10.1088/0034-4885/77/2/02660224444713 Search in Google Scholar

Schmitt, D. P., Riggs, R. D., and Wrather, J. A.. 2004. Biology and Management of Soybean Cyst Nematode, 2nd ed., Schmitt & Associates, Marceline, MI. Schmitt D. P. Riggs R. D. , and Wrather J. A. . 2004 . Biology and Management of Soybean Cyst Nematode , 2nd ed. , Schmitt & Associates , Marceline, MI . Search in Google Scholar

Shapiro, S., and Wilk, M.. 1965. An analysis of variance test for normality (complete samples). Biometrika 52: 591-611. Shapiro S. , and Wilk M. . 1965 . An analysis of variance test for normality (complete samples) . Biometrika 52 : 591 - 611 . 10.1093/biomet/52.3-4.591 Search in Google Scholar

Shea, K., and Possingham, H.. 2000. Optimal release strategies for biological control agents: an application of stochastic dynamic programming to population management. Journal of Applied Ecology 37: 77-86. Shea K. , and Possingham H. . 2000 . Optimal release strategies for biological control agents: an application of stochastic dynamic programming to population management . Journal of Applied Ecology 37 : 77 - 86 . 10.1046/j.1365-2664.2000.00467.x Search in Google Scholar

Siettos, C. I., and Russo, L.. 2013. Mathematical modeling of infectious disease dynamics. Virulence 4: 295-306. Siettos C. I. , and Russo L. . 2013 . Mathematical modeling of infectious disease dynamics . Virulence 4 : 295 - 306 . 10.4161/viru.24041371033223552814 Search in Google Scholar

Wheeler, B.. 2010. lmperm: Permutation Tests for Linear Models, r Package Version 1: 1-2Vienna, Austria. Wheeler B. . 2010 . lmperm: Permutation Tests for Linear Models, r Package Version 1 : 1 - 2 Vienna, Austria . Search in Google Scholar