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Association of the Apolipoprotein A-I gene polymorphisms with cardiovascular disease risk factors and atherogenic indices in patients from assam, Northeast India

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Figure 1

Polyacrylamide gel (12.0%) picture showing restriction fragments of various sizes, representing the different genotypes obtained for the G-75A/C+83T polymorphic sites. Lane M: 50 bp DNA lane marker (Thermo Fischer Scientific, Waltham, MA, USA); lanes 1, 5, 6 and 8: GG/CC (46, 66, 114 and 209 bp fragments); lanes 2, 4 and 7: GA/CC (46, 66, 114, 18 and 209 bp fragments; lane 3: AA/CC (46, 180 and 209 bp fragments); lane 9: GG/CT (46, 66, 114, 209 and 255 bp fragments). No TT genotype for the C+83T site was detected in the study.
Polyacrylamide gel (12.0%) picture showing restriction fragments of various sizes, representing the different genotypes obtained for the G-75A/C+83T polymorphic sites. Lane M: 50 bp DNA lane marker (Thermo Fischer Scientific, Waltham, MA, USA); lanes 1, 5, 6 and 8: GG/CC (46, 66, 114 and 209 bp fragments); lanes 2, 4 and 7: GA/CC (46, 66, 114, 18 and 209 bp fragments; lane 3: AA/CC (46, 180 and 209 bp fragments); lane 9: GG/CT (46, 66, 114, 209 and 255 bp fragments). No TT genotype for the C+83T site was detected in the study.

Baseline characteristics of the study subjects. (Values are expressed as mean ± SD or n (%). Categorical variables were compared by the χ2 test. Continuous variables were compared by unpaired t-test.)

Study Subjects (n = 200)

Variables Case Group (n = 100) Control Group (n = 100) p Value
Age (years) 43.12 ± 11.64 42.95 ± 11.60 0.92

Sex
  males 66 (66.0%) 61 (61.0%) 0.56
  females 34 (34.0%) 39 (39.0%)

Smokers
  yes 35 (35.0%) 25 (25.0%) 0.16
  no 65 (65.0%) 75 (75.0%)

Alcohol use
  yes 20 (20.0%) 32 (32.0%) 0.08
  no 80 (80.0%) 68 (68.0%)

Body mass index (kg/m2) 24.79 ± 3.08 22.07 ± 3.18 <0.05

Waist circumference (cm) 87.14 ± 5.89 80.72 ± 6.06 <0.05

Systolic blood pressure (mmHg) 133.58 ± 16.44 117.86 ± 8.53 <0.05

Diastolic blood pressure (mmHg) 84.32 ± 8.84 77.20 ± 5.92 <0.05

HDL-C (mg/dL) 30.87 ± 5.19 54.61 ± 12.17 <0.05

Total cholesterol (mg/dL) 175.54 ± 35.98 160.79 ± 25.70 <0.05

Triglycerides (mg/dL) 145.95 ± 29.39 95.35 ± 23.55 <0.05

LDL-C (mg/dL) 116.41 ± 28.19 87.37 ± 22.96 <0.05

VLDL-C (mg/dL) 29.12 ± 7.62 19.03 ± 5.90 <0.05

Non-HDL-C (mg/dL) 144.67 ± 32.47 106.18 ± 24.83 <0.05

Castelli’s risk index I 5.71 ± 0.87 3.04 ± 0.65 <0.05

Castelli’s risk index II 3.78 ± 0.79 1.68 ± 0.56 <0.05

Atherogenic index of plasma 0.66 ± 0.13 0.26 ± 0.14 <0.05

Atherogenic coefficient 4.71 ± 0.87 2.04 ± 0.65 <0.05

Influence of C+83T polymorphism on cardiovascular risk factors. [Values are expressed as adjusted mean±SE. Adjusted means compared between genotypes by analysis of covariance (ANCOVA). Statistically significant (p <0.05) differences among genotypes are highlighted in bold. Furthermore, means in a genotype column bearing an ‘a’ or ‘b’ as a superscript are significantly different.]

Phenotypic Variables Case Group (n = 100) Control Group (n = 100) Study Subjects (n = 200)
Lipid Profile
CC CT CC CT CC CT
HDL-C

Means adjusted taking age, gender, smoking, alcohol use, TC, TG, WC and BMI as covariates.

30.8 ± 0.4 31.1 ± 1.1 54.7 ± 1.2 53.7 ± 3.1 43.1 ± 0.9 39.9 ± 2.5
TC

Means adjusted taking age, gender, smoking, alcohol use, WC and BMI as covariates.

176.5 ± 3.9 167.8 ± 11.2 162.6 ± 2.7 148.4 ± 7.1 169.7 ± 2.4 157.2 ± 6.5
TG

Means adjusted taking age, gender, smoking, alcohol use, WC and BMI as covariates.

148.8a ± 123.2 123.2b ± 11.4 96.6 ± 3.0 87.1 ± 7.9 122.7a± 2.9 105.3b ± 7.9
LDL-C

Means adjusted taking age, gender, smoking, alcohol use, WC and BMI as covariates.

116.9 ± 3.2 112.4 ± 9.1 88.7 ± 2.5 78.6 ± 6.4 102.9 ± 2.2 94.8 ± 5.9
VLDL-C

Means adjusted taking age, gender, smoking, alcohol use, WC and BMI as covariates.

29.7a ± 0.8 24.7b ± 2.3 19.3 ± 0.6 17.3 ± 1.6 24.5a ± 0.6 21.1b ± 1.6
Atherogenic Indices
Non-HDL-C

Means adjusted taking age, gender, smoking, alcohol use, WC and BMI as covariates.

145.6 ± 3.5 137.5 ± 10.1 107.7 ± 2.7 95.9 ± 6.9 126.7 ± 2.5 116.2 ± 6.8
CRI-I

Means adjusted taking age, gender, smoking, alcohol use, WC and BMI as covariates.

5.7 ± 0.1 5.6 ± 0.3 3.1 ± 0.1 2.9 ± 0.2 4.4 ± 0.1 4.2 ± 0.3
CRI-II

Means adjusted taking age, gender, smoking, alcohol use, WC and BMI as covariates.

3.8 ± 0.1 3.8 ± 0.2 1.7 ± 0.1 1.5 ± 0.2 2.7 ± 0.1 2.7 ± 0.2
AIP

Means adjusted taking age, gender, smoking, alcohol use, WC and BMI as covariates.

0.67a ± 0.01 0.59b ± 0.04 0.27 ± 0.01 0.23 ± 0.04 0.47a ± 0.01 0.41b ± 0.03
AC

Means adjusted taking age, gender, smoking, alcohol use, WC and BMI as covariates.

4.7 ± 0.1 4.6 ± 0.3 2.1 ± 0.1 1.8 ± 0.2 3.4 ± 0.1 3.2 ± 0.2
Obesity Indices
BMI

Means adjusted taking age, gender, smoking, alcohol use, TC, HDL-C and TG as covariates.

24.9 ± 0.3 23.5 ± 0.9 22.1 ± 0.3 22.1 ± 0.9 23.5 ± 0.3 22.8 ± 0.7
WC

Means adjusted taking age, gender, smoking, alcohol use, TC, HDL-C and TG as covariates.

87.3 ± 0.6 85.5 ± 1.7 80.6 ± 0.6 81.4 ± 1.7 84.0 ± 0.5 83.3 ± 1.4
Blood Pressure
Systolic BP

Means adjusted taking age, gender, smoking, alcohol use, TC, HDL-C, TG, BMI and WC as covariates.

133.6 ± 1.7 133.7 ± 4.9 117.7 ± 0.8 119.1 ± 2.2 125.6 ± 1.0 126.3 ± 28
Diastolic BP

Means adjusted taking age, gender, smoking, alcohol use, TC, HDL-C, TG, BMI and WC as covariates.

83.8 ± 0.9 88.3 ± 2.7 77.0 ± 0.6 77.9 ± 1.5 80.4 ± 0.6 82.9 ± 1.6

Influence of G-75A polymorphism on cardiovascular risk factors. [Values are expressed as adjusted mean±standard error (SE). Adjusted means compared between genotypes by analysis of covariance (ANCOVA). Statistically significant (p <0.05) differences among genotypes are highlighted in bold. Furthermore, means in a genotype column bearing an ‘a’ or ‘b’ as a superscript are significantly different.]

Phenotypic Variables Case Group (n = 100) Control Group (n = 100) Study Subjects (n = 200)
Lipid Profile
GG GA AA GG GA AA GG GA AA
HDL-C

Means adjusted taking age, gender, smoking, alcohol use, TC, TG, WC and BMI as covariates.

30.7±0.5 31.3±0.6 29.5±2.3 55.4±1.5 54.8±2.0 47.0±4.6 42.7±1.1 42.9±1.5 42.2±3.9
TC

Means adjusted taking age, gender, smoking, alcohol use, WC and BMI as covariates.

179.0±4.7 172.9±6.3 134.9±21.9 156.5±3.3 166.1±4.5 172.9±10.1 168.2±2.9 169.2±3.9 161.3±10.5
TG

Means adjusted taking age, gender, smoking, alcohol use, WC and BMI as covariates.

145.5±4.9 148.1±6.7 129.6±23.2 93.8±3.7 94.9±4.9 110.3±11.2 120.4±3.5 121.1±4.8 121.5±12.7
LDL-C

Means adjusted taking age, gender, smoking, alcohol use, WC and BMI as covariates.

120.7±3.8 113.3±5.1 87.2±17.8 82.7a±2.9 92.2b±3.9 105.1b±8.9 102.4±2.7 101.6±3.6 97.9±9.6
VLDL-C

Means adjusted taking age, gender, smoking, alcohol use, WC and BMI as covariates.

29.0±0.9 29.6±1.3 25.8±4.7 18.7±0.7 18.9±0.9 21.9±2.2 24.2±2.5 24.2±0.9 24.0±0.7
Atherogenic Indices
Non-HDL-C

Means adjusted taking age, gender, smoking, alcohol use, WC and BMI as covariates.

147.9±4.2 141.9±5.7 109.5±19.8 101.1a±3.2 111.3a, b±4.3 125.9b±9.7 125.5±3.1 126.1±4.1 120.2±10.9
CRI-I

Means adjusted taking age, gender, smoking, alcohol use, WC and BMI as covariates.

5.8±0.1 5.6±0.2 5.4±0.5 2.9a±0.1 3.1a±0.1 3.7b±0.2 4.4±0.1 4.3±0.2 4.1±0.5
CRI-II

Means adjusted taking age, gender, smoking, alcohol use, WC and BMI as covariates.

3.9±0.1 3.6±0.1 3.4±0.5 1.6a±0.1 1.8a, b±0.1 2.2b±0.2 2.8±0.1 2.7±0.1 2.5±0.4
AIP

Means adjusted taking age, gender, smoking, alcohol use, WC and BMI as covariates.

0.66±0.02 0.67±0.02 0.69±0.08 0.24±0.02 0.26±0.02 0.36±0.05 0.46±0.02 0.46±0.03 0.48±0.07
AC

Means adjusted taking age, gender, smoking, alcohol use, WC and BMI as covariates.

4.8±0.1 4.6±0.2 4.4±0.5 1.9a±0.1 2.1a±0.1 2.7b±0.2 3.4±0.1 3.3±0.2 3.1±0.5
Obesity Indices
BMI

Means adjusted taking age, gender, smoking, alcohol use, TC, HDL-C and TG as covariates.

24.5±0.4 25.1±0.5 26.3±1.9 21.9±0.4 22.3±0.6 21.9±1.3 23.3±0.3 23.7±0.4 23.1±1.1
WC

Means adjusted taking age, gender, smoking, alcohol use, TC, HDL-C and TG as covariates.

86.7±0.7 88.3±0.9 83.7±3.4 80.6±0.8 80.8±1.1 81.2±2.4 83.7±0.6 84.6±0.8 81.7±2.2
Blood Pressure
Systolic BP

Means adjusted taking age, gender, smoking, alcohol use, TC, HDL-C, TG, BMI and WC as covariates.

135.4±2.1 130.7±2.8 129.1±9.7 118.1±1.0 117.2±1.4 118.7±3.1 127.0±1.2 124.0±1.6 121.5±4.5
Diastolic BP

Means adjusted taking age, gender, smoking, alcohol use, TC, HDL-C, TG, BMI and WC as covariates.

85.1±1.1 83.7±1.6 77.2±5.4 77.1±0.7 77.1±0.9 78.3±2.2 120.4±3.5 80.3±0.9 78.4±2.4

Association of decreased high density lipoprotein cholesterol with G-75A and C+83T polymorphisms under different genetic models. [Values are expressed as n (%) or OR (95% CI).]

SNPs Model Genotype/Allele Case Control Crude OR (95% CI) Adjusted OR

Odds ratio was adjusted for gender, age, smoking, alcohol use, WC, BMI, TC and TG. In every model, for each OR value, the corresponding 95% CI extended across 1. None of the OR values were statistically significant (p >0.05).

(95% CI)
G-75A Additive: GG vs. GA vs. AA GGGAAA 62 (62.0%)35 (35.0%)3 (3.0%) 60 (60.0%)33 (33.0%)7 (7.0%) reference1.03 (0.57-1.86)0.42 (0.10-1.68) reference0.82 (0.36-1.88)0.23 (0.04-1.24)
Dominant: GG vs. (GA + AA) GGGA +AA 62 (62.0%)38 (38.0%) 60 (60.0%)40 (40.0%) reference0.92 (0.52-1.63) reference0.67 (0.30-1.47)
Recessive: (GG + GA) vs. AA GG + GAAA 97 (97.0%)3 (3.0%) 93 (93.0%)7 (7.0%) reference0.41 (0.08-1.62) reference0.24 (0.05-1.29)
Allelic: G vs. A GA 159 (79.5%)41 (20.5%) 153 (76.5%)47 (23.5%) reference0.84 (0.52-1.35) reference0.61 (0.32-1.17)
C+83 T CC vs. CT CCCT 89 (89.0%)11 (11.0%) 87 (87.0%)13 (13.0%) reference0.83 (0.34-1.97) reference1.66 (0.54-5.13)
Allelic: C vs.T CT 189 (94.5%)11 (5.5%) 187 (93.5%)13 (6.5%) reference0.84 (0.36-1.94) reference1.58 (0.54-4.59)

The distribution of G-75A and C+83T polymorphisms in the case and control groups. [Values are expressed as n (%).]

Genotype Frequency Allelic Frequency
SNPs Group GG GA AA G A
G-75A Case 62 (62.0%) 35 (35.0%) 3 (3.0%) 159 (79.5%) 41 (20.5%)
Control 60 (60.0%) 33 (33.0%) 7 (7.0%) 153 (76.5%) 47 (23.5%)
χ2 = 1.692 (df = 2; p = 0.43 χ2 = 0.364 (df = 1; p = 0.55)
CC CT TT C T
C+83T Case 89 (89.0%) 11 (11.0%) 189 (94.5%) 11 (5.5%)
Control 87 (87.0%) 13 (13.0%) 187 (93.5%) 13 (6.5%)
χ2 = 0.047 (df = 1; p = 0.83) χ2 = 0.044 (df = 1; p = 0.83)
Diplotype Frequency
GG/CC GA/CC AA/CC GG/CT GA/CT
Combined Case 54 (54.0%) 32 (32.0%) 3 (3.0%) 8 (8.0%) 3 (3.0%)
Control 50 (50.0%) 30 (30.0%) 7 (7.0%) 10 (10.0%) 3 (3.0%)
χ2 = 2.041 (df = 4; p = 0.73)
eISSN:
1311-0160
Lingua:
Inglese
Frequenza di pubblicazione:
2 volte all'anno
Argomenti della rivista:
Medicina, Scienze medicali di base, altro