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New insights into the prevalence and phylogenetic diversity of Cysticercus ovis isolates in sheep from Sulaymaniyah, Iraq

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Fig.1

Comparison of pairwise nucleotide sequence variations between six haplotypes related to the COX1 gene of T. ovis (current study) and other associated taeniids
Comparison of pairwise nucleotide sequence variations between six haplotypes related to the COX1 gene of T. ovis (current study) and other associated taeniids

Fig. 2

Phylogeny of sheep T. ovis isolates from this work, and other related taeniid sequences. The phylogenetic tree was analysed using the neighbour-joining method from partial mitochondrial COX1 gene sequences. The scale bar shows 2% of variation. MW017206–MW017211 – GenBank accession numbers illustrating T. ovis sequences discovered in the presented work; IQTOH1–IQTOH6 – haplotypes of T. ovis
Phylogeny of sheep T. ovis isolates from this work, and other related taeniid sequences. The phylogenetic tree was analysed using the neighbour-joining method from partial mitochondrial COX1 gene sequences. The scale bar shows 2% of variation. MW017206–MW017211 – GenBank accession numbers illustrating T. ovis sequences discovered in the presented work; IQTOH1–IQTOH6 – haplotypes of T. ovis

The nucleotide sequences of T. ovis and other taeniids from GenBank used for phylogeny

Species of parasite Accession No. Country Host Citation (reference)
T. ovis AB731675 New Zealand Canine Nakao et al., 2013 (17)
T. ovis JX134111-JX134114 Iran Sheep Rostami et al., 2019 (23)
JX134120-JX134122
T. solium AB066491 Ecuador Pig Nakao et al., 2002 (18)
T. saginata AB533173 Thailand Human Okamoto, 2016 unpublished
T. multiceps DQ321830 Italy Sheep Varcasia et al., 2006 (28)
T. hydatigena MT086500 Iraq Sheep Mohammed unpublished and Hama-Soor, 2020
Echinococcus granulosus GQ168811 India Buffalo Pan et al., 2016 unpublished

Nucleic acid substitution and related amino acid changes in the T. ovis sheep profiles of six COX1 sequences in Iraq compared to New Zealand (accession number AB731675)

Haplotype (present study) No. and position of nucleotide substitution Substitution of amino acid
IQTOH1 225 (TC) Tyr Tyr
264 (TC) Ile Ile
IQTOH2 163 (TC) Phe Leu
234 (GT) Leu Leu
IQTOH3 96 (TG) Cys Trp
183 (CT) Ile Ile
IQTOH4

No substitution

No substitution

IQTOH5 223 (TC) Tyr His
345 (TC) Asp Asp
IQTOH6 144 (TA) Asp Glu
163 (TC) Phe Leu
229 (CT) Leu Phe
352 (CT) Leu Phe

Frequency distribution of C. ovis cysts in sheep (NTotal number of examined sheep= 6,411) from Sulaymaniyah, Iraq

Predilection sites Number of infected (%) 95% CI% P value of X2
Heart muscle 81(1.26) 0.29–2.23
Diaphragm 65(1.01) 0.17–1.85
Intercostal muscles 55(0.85) 0.19–1.51 < 0.05
Abdominal muscles 42(0.65) 0.03–1.33

Haplotype distribution patterns of T. ovis from Iraqi sheep based on mitochondrial COX1 gene with associated accession numbers

Haplotype Number of specimens (isolates) GenBank accession No.
IQTOH1 13 MW017206
IQTOH2 8 MW017207
IQTOH3 6 MW017208
IQTOH4 4 MW017209
IQTOH5 3 MW017210
IQTOH6 1 MW017211

Prevalence of C. ovis cysts based on sex and age, in sheep (NTotal number of examined sheep = 6,411) from Sulaymaniyah, Iraq

Sheep
Number of examined Number of infected (%) 95% CI% P value of X2
Overall 84(1.31) 0.21–2.41
Sex Male 3,438 54(1.57) 0.82–2.32
Female 2,973 30(1.00) 0.21–1.79 = 0.062
Age Young (<1 y) 3,009 25(0.83) 0.33–1.33
Adult(>1 y) 3,402 59(1.73) 0.96–0.50 < 0.001
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Anglais
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Sujets de la revue:
Life Sciences, Molecular Biology, Microbiology and Virology, other, Medicine, Veterinary Medicine