Phylogenetic Uniqueness of Honeybee Apis Cerana from the Korean Peninsula Inferred from The Mitochondrial, Nuclear, and Morphological Data

Arias, M.C., & Sheppard, W.S. (1996). Molecular phylogenetics of honey bee subspecies (Apis mellifera L.) Inferred from Mitochondrial DNA Sequence. Molecular Phylogenetics and Evolution, 5(3), 557-566. DOI: 10.1006/mpev.1996.005010.1006/mpev.1996.00508744768Open DOISearch in Google Scholar

Arias, M.C., & Sheppard, W.S. (2005). Phylogenetic relationships of honey bees (Hymenoptera: Apinae: Apini) inferred from nuclear and mitochondrial DNA sequence data. Molecular Phylogenetics and Evolution, 37(1), 25-35. DOI: 10.1016/j.ympev.2005.02.01710.1016/j.ympev.2005.02.01716182149Open DOISearch in Google Scholar

Ashokan, K.V. (2011). Molecular phylogenetic study on Apis mellifera subspecies inferred from Cytochrome Oxidase I sequence. Indian Journal of Fundamental and Applied Life Sciences, 1(4), 193-202.Search in Google Scholar

Behura, S.K. (2007). Analysis of nuclear copies of mitochondrial sequences in honeybee (Apis mellifera) genome. Molecular Biology and Evolution, 24(7), 1492-1505. DOI: 10.1093/molbev/msm06810.1093/molbev/msm06817404397Open DOISearch in Google Scholar

Belle, E.M., Piganeau, G., Gardner, M., & Eyre-Walker, A. (2005). An investigation of the variation in the transition bias among various animal mitochondrial DNA. Gene, 355, 58-66.10.1016/j.gene.2005.05.01916039074Search in Google Scholar

Bernt, M., Donath, A., Jühling, F., Externbrink, F., Florentz, C., Fritzsch, G., … Stadler, P.F. (2013). MITOS: improved de novo Metazoan mitochondrial genome annotation. Molecular Phylogenetics and Evolution, 69, 313-319. DOI: 10.1016/j.ympev.2012.08.02310.1016/j.ympev.2012.08.02322982435Open DOISearch in Google Scholar

Buttel-Reepen, H. (1906). Mitteilungen aus dem zoologischen museum in Berlin. Berlin: Springer Netherlands.Search in Google Scholar

Cameron, S.A. (1993). Multiple origins of advanced eusociality in bees inferred from mitochondrial DNA sequences. Proceedings of the National Academy of Sciences, 90, 8687–8691. DOI: 10.1073/pnas.90.18.868710.1073/pnas.90.18.8687474238378349Open DOISearch in Google Scholar

Choi, Y.S., Lee, M.Y., Hong, I.P., Kim, N.S., Kim, H.K., Lee, K.G., Lee, M L. (2010). Occurrence of sacbrood virus in Korean apiaries from Apis cerana (Hymenoptera: Apidae). Journal of Apiculture, 25(3), 187-191. DOI: 10.17519/apiculture.2017.11.32.4.34510.17519/apiculture.2017.11.32.4.345Search in Google Scholar

Clary, D.O., & Wolstenholme, D.R. (1985). The mitochondrial DNA molecule of Drosophila yakuba: nucleotide sequence, gene organization, and genetic code. Journal of Molecular Evolution, 22, 252-271. DOI: 10.1007/BF0209975510.1007/BF020997553001325Open DOISearch in Google Scholar

Cornuet, J.M., Garnery, L., & Solignac, M. (1991). Putative origin and function of the intergenic region between COI and COII of Apis mellifera L. mitochondrial DNA. Genetics, 128, 393-403. DOI: 10.1051/apido:200700710.1051/apido:2007007Open DOISearch in Google Scholar

Crane, E. (1999). The world history of beekeeping and honey hunting. New York: Routledge.10.4324/9780203819937Search in Google Scholar

Crozier, R.H., & Crozier, Y.C. (1993). The mitochondrial genome of the honeybee Apis mellifera: complete sequence and genome organization. Genetics, 133(1), 97-117. DOI: 10.1111/j.1365-2583.1993.tb00131.x10.1111/j.1365-2583.1993.tb00131.x9087549Open DOISearch in Google Scholar

De Salle, R., Freedman, T., Prager, E.M., & Wilson, A.C. (1987). Tempo and mode of sequence evolution in mitochondrial DNA of Hawaiian Drosophila. Journal of Molecular Evolution, 26, 157-164. DOI: 10.1007/BF0211128910.1007/BF021112893125333Open DOISearch in Google Scholar

DeSalle, R., Freedman, T., Prager, E.M., & Wilson, A.C. (1987). Tempo and mode of sequence evolution in mitochondrial DNA of Hawaiian Drosophila. Journal of Molecular Evolution, 26(1–2), 157–164. DOI: 10.1007/BF0211128910.1007/BF02111289Open DOISearch in Google Scholar

Diniz-Filho, J.A.F., Malapsina, O., & Pignata, M.I.B. (1993). Geographic variation in Apis cerana indica F.: a spatial autocorrelation analysis of morphometric patterns. Journal of Apicultural Research, 32, 65-72. DOI: 10.1080/00218839.1993.1110128910.1080/00218839.1993.11101289Open DOISearch in Google Scholar

Eimanifar, A., Kimball, R.T., Braun, E.L., Moustafa, B.M., Haddad, N., Fuchs, S., Grünewald, B., Ellis, J.D. (2017). The complete mitochondrial genome of the Egyptian honey bee, Apis mellifera lamarckii (Insecta: Hymenoptera: Apidae). Mitochondrial DNA Part B, 2(1), 270-272. DOI: 10.1080/23802359.2017.132534310.1080/23802359.2017.1325343779982833473796Open DOISearch in Google Scholar

Engel, M.S. (1999). The taxonomy of recent and fossil honey bees (Hymenoptera Apidae Apis). Journal of Hymenoptera Research, 8(2), 165-196. DOI: 10.1007/978-1-4614-4960-7_1810.1007/978-1-4614-4960-7_18Open DOISearch in Google Scholar

Engel, M.S., & Schultz, T.R. (1997). Phylogeny and behavior in honey bees (Hymenoptera: Apidae). Annals of the Entomological Society of America, 90(1), 43-53. DOI: 10.1093/aesa/90.1.4310.1093/aesa/90.1.43Open DOISearch in Google Scholar

Garnery, L., Cornuet, J.M., & Solignac, M. (1992). Evolutionary history of the honey bee Apis mellifera inferred from mitochondrial DNA analysis. Molecular Ecology, 1(3), 145-154. DOI: 10.1111/j.1365-294X.1992.tb00170.x10.1111/j.1365-294X.1992.tb00170.x1364272Open DOISearch in Google Scholar

Garnery, L., Mosshine, E.H., Oldroyd, B.P., & Cornuet, J.M. (1995). Mitochondrial DNA variation in Moroccan and Spanish honey bee populations. Molecular Ecology, 4(4), 465-472. DOI: 10.1111/j.1365-294X.1995.tb00240.x10.1111/j.1365-294X.1995.tb00240.xOpen DOISearch in Google Scholar

Han, T., Lee, W., Lee, S., Park, I.G., Park, H. (2016). Reassessment of species diversity of the subfamily Denticollinae (Coleoptera: Elateridae) through DNA barcoding. PLoS ONE, 11(2), 1-28. DOI: 10.1371/journal.pone.014860210.1371/journal.pone.0148602474405326848744Open DOISearch in Google Scholar

Hepburn, H.R., & Radloff, S.E. (2011). Honeybees of Asia. Berlin, Heidelberg, Germany: Springer-Verlag. DOI: 10.1007/978-3-642-16422-410.1007/978-3-642-16422-4Open DOISearch in Google Scholar

Hepburn, H.R., Radloff, S.E., Verma, S., & Verma, L.R. (2001). Morphometric analysis of Apis cerana populations in the southern Himalayan region. Apidologie, 32(5), 435-447. DOI: 10.1051/apido:200114210.1051/apido:2001142Open DOISearch in Google Scholar

HsuChen, C.C., Kotin, R.M., & Dubin, D.T. (1984). Sequences of the coding and flanking regions of the large ribosomal subunit RNA gene of mosquito mitochondria. Nucleic Acids Research, 12(20), 7771-7785. DOI: 10.1093/nar/12.20.777110.1093/nar/12.20.77713201996093053Open DOISearch in Google Scholar

Ilyasov, R.A., Poskryakov, A.V., & Nikolenko, A.G. (2015). New SNP markers of the honeybee vitellogenin gene (Vg) used for identification of subspecies Apis mellifera mellifera L. Russian Journal of Genetics, 51(2), 163-168. DOI: 10.1134/S102279541502008810.1134/S1022795415020088Open DOISearch in Google Scholar

Jinam, T., Nishida, N., Hirai, M., Kawamura, S., Oota, H., Umetsu, K., Saitou, N. (2012). The history of human populations in the Japanese Archipelago inferred from genome-wide SNP data with a special reference to the Ainu and the Ryukyuan populations. Journal of Human Genetics, 57(12), 787-795. DOI: 10.1038/jhg.2012.11410.1038/jhg.2012.11423135232Open DOISearch in Google Scholar

Jukes, T.H., & Cantor, C.R. (1969) Evolution of protein molecules. In Munro, H. N., editor, Mammalian protein metabolism. (21-132 pp.). New York: Academic Press.10.1016/B978-1-4832-3211-9.50009-7Search in Google Scholar

Kartavtsev, Y.F. (2009). Molecular evolution and population genetics. (280 pp.). Vladivostok: Far Eastern University Publishing.Search in Google Scholar

Ken, T., Fuchs, S., Koeniger, N., & Ruiguang, Z. (2003). Morphological characterization of Apis cerana in the Yunnan Province of China. Apidologie, 34(6), 553-561. DOI: 10.1051/apido:200304910.1051/apido:2003049Open DOISearch in Google Scholar

Kent, C.F., Issa, A., Bunting, A.C., & Zayed, A. (2011). Adaptive evolution of a key gene affecting queen and worker traits in the honey bee, Apis mellifera. Molecular Ecology, 20(24), 5226-5235. DOI: 10.1111/j.1365-294X.2011.05299.x10.1111/j.1365-294X.2011.05299.x21981322Open DOISearch in Google Scholar

Koetz, A.H. (2013). Ecology, behaviour and control of Apis cerana with a focus on relevance to the Australian incursion. Insects, 4, 558-592. DOI: 10.3390/insects404055810.3390/insects4040558455350426462524Open DOISearch in Google Scholar

Kumar, S., Stecher, G., & Tamura, K. (2016). MEGA7: Molecular Evolutionary Genetics Analysis version 7.0 for bigger datasets. Molecular Biology and Evolution, 33, 1870-1874. DOI: 10.1093/molbev/msw05410.1093/molbev/msw054821082327004904Search in Google Scholar

LaSalle, J., & Gauld, I.D. (1993). Hymenoptera: their diversity and their impact on the diversity of other organisms. In Hymenoptera and biodiversity. Wallingford, United Kingdom: CAB International.Search in Google Scholar

Lee, J.Y., Wang, A.R., Choi, Y.S., Thapa, R., Kwon, H.W., Kim, I. (2016). Mitochondrial DNA variations in Korean Apis cerana (Hymenoptera: Apidae) and development of another potential marker. Apidologie, 47(1), 123-134. DOI: 10.1007/s13592-015-0381-y.10.1007/s13592-015-0381-yOpen DOISearch in Google Scholar

Lee, M.L., & Choi, S.Y. (1986). Biometrical studies on the variation of some morphological characters in Korean Honeybees, Apis cerana F. and A. mellifera L. Korean Journal of Apiculture, 1(1), 5-23.Search in Google Scholar

Lindahl, T. (1993). Instability and decay of the primary structure of DNA. Nature, 362, 709-715. DOI: 10.1038/362709a010.1038/362709a08469282Open DOISearch in Google Scholar

Lindauer, M. (1956). Uber die Verstandigung bei indischen Bienen. Zeitschrift für vergleichende Physiologie, 38, 521-557.10.1007/BF00341108Search in Google Scholar

Lindblad-Toh, K., Winchester, E., Daly, M.J., Wang, D.G., Hirschhorn, J.N. (2000). Large-scale discovery and genotyping of single nucleotide polymorphisms in the mouse. Nature Genetics, 24, 381-386. DOI: 10.1038/7421510.1038/7421510742102Open DOISearch in Google Scholar

Martin, A., (1995). Metabolic rate and directional substitution in animal mitochondrial DNA. Molecular Biology and Evolution, 12, 1124-1131. DOI: 10.1093/oxfordjournals.molbev.a04028610.1093/oxfordjournals.molbev.a0402868524045Open DOISearch in Google Scholar

Moriyama, E.N., & Powell, J.R. (1996). Intraspecific nuclear DNA variation in Drosophila. Molecular Biology and Evolution, 13, 261-277. DOI: 10.1093/oxford-journals.molbev.a02556310.1093/oxford-journals.molbev.a025563Open DOISearch in Google Scholar

Nei, M. (1987). Molecular evolutionary genetics. (512 pp.). New York, USA: Columbia University Press.10.7312/nei-92038Search in Google Scholar

Nei, M., & Kumar, S. (2000). Molecular evolution and phylogenetics. New York: Oxford University Press. DOI: 10.1046/j.1365-2540.2001.0923a.x10.1046/j.1365-2540.2001.0923a.xOpen DOISearch in Google Scholar

Okuyama, H., Wakamiya, T., Fujiwara, A., Washitani, I., Takahashi, J. (2017). Complete mitochondrial genome of the honeybee Apis cerana native to two remote islands in Japan. Conservation Genetics Resources, 9(4), 557-560. DOI: 10.1007/s12686-017-0721-510.1007/s12686-017-0721-5Open DOISearch in Google Scholar

Pesenko, Y.A., Lelei, A.S., Radchenko, V.G., Filatkin, G.N. (1989). Chinese wax-bee, Apis cerana cerana F. (Hymenoptera, Apidae) in the Far East of the USSR (in Russian). Entomologicheskoe Obozrenie, 68, 527-548.Search in Google Scholar

Radloff, S.E., Hepburn, C., Hepburn, H.R., Fuchs, S., Hadisoesilo, S., Tan, K., Engel, M.S., Kuznetsov, V. (2010). Population structure and classification of Apis cerana. Apidologie, 41, 589-601. DOI: 10.1051/apido/201000810.1051/apido/2010008Open DOISearch in Google Scholar

Raffiudin, R., & Crozier, R.H. (2007). Phylogenetic analysis of honey bee behavioral evolution. Molecular Phylogenetics and Evolution, 43(2), 543–552. DOI: 10.1016/j.ympev.2006.10.01310.1016/j.ympev.2006.10.013Open DOISearch in Google Scholar

Ramírez, S.R., Roubik, D.W., Skov, C.E., & Pierce, N.E. (2010). Phylogeny, diversification patterns and historical biogeography of euglossine orchid bees (Hymenoptera: Apidae). Biological Journal of the Linnean Society, 100(3), 552-572. DOI: 10.1111/j.1095-8312.2010.01440.x10.1111/j.1095-8312.2010.01440.xOpen DOISearch in Google Scholar

Rinderer, T.E. (1986). Bee genetics and breeding. San Diego: Academic Press. DOI: 10.1016/B978-0-12-588920-9.50011-X10.1016/B978-0-12-588920-9.50011-XOpen DOISearch in Google Scholar

Ruttner, F. (1988). Biogeography and taxonomy of honeybees. Berlin, Heidelberg, Germany: Springer-Verlag. DOI: 10.1016/0169-5347(89)90176-610.1016/0169-5347(89)90176-6Open DOISearch in Google Scholar

Ruttner, F., & Maul, V. (1983). Experimental analysis of the reproductive interspecific isolation of Apis mellifera L. and Apis cerana Fabr. Apidologie, 14(4), 309-327. DOI: 10.1051/apido:1983040510.1051/apido:19830405Open DOISearch in Google Scholar

Saitou, N., & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution, 4, 406-425.Search in Google Scholar

Seplyarskiy, V.B., Kharchenko, P., Kondrashov, A.S., & Bazykin, G.A. (2012). Heterogeneity of the transition/transversion ratio in Drosophila and Hominidae genomes. Molecular Biology and Evolution, 29(8), 1943-1955. DOI: 10.1093/molbev/mss07110.1093/molbev/mss07122337862Search in Google Scholar

Shufran, K.A., Burd, J.D., Anstead, J.A., & Lushai, G. (2000). Mitochondrial DNA sequence divergence among greenbug (Homoptera: Aphididae) biotypes: Evidence for host-adapted races. Insect Molecular Biology, 9(2), 179–184. DOI: 10.1046/j.1365-2583.2000.00177.x10.1046/j.1365-2583.2000.00177.x10762425Open DOISearch in Google Scholar

Smith, D.R. (1990). Mitochondrial DNA and biogeography of Apis species. Proceedings, XI Congress, IUSSI, India, 113-114.Search in Google Scholar

Smith, D.R., Warrit, N., & Hepburn, H.R. (2004). Apis cerana from Myanmar (Burma): unusual distribution of mitochondrial lineages. Apidologie, 35, 637–644. DOI: 10.1051/apido:200405810.1051/apido:2004058Open DOISearch in Google Scholar

Songrarn, O., Sittipraneed, S., & Klinbunga, S. (2006). Mitochondrial DNA diversity and genetic differentiation of the honeybee (Apis cerana) in Thailand. Biochemical Genetics, 44 (5-6), 256-269. DOI: 10.1007/s10528-006-9030-510.1007/s10528-006-9030-517028787Open DOISearch in Google Scholar

Sugawara, M. (2000). Feral colonies of Japanese honey bees, Apis cerana japonica and their life history. 2. Natural nests and swarming. Mitsubachi Kagaku (Honeybee Science), 21(1), 35-39.Search in Google Scholar

Takahashi, J., Wakamiya, T., Kiyoshi, T., Uchiyama, H., Yajima, S., Kimura, K., Nomura, T. (2016). The complete mitochondrial genome of the Japanese honeybee, Apis cerana japonica (Insecta: Hymenoptera: Apidae). Mitochondrial DNA Part B, 1(1), 156-157. DOI: 10.1080/23802359.2016.114410810.1080/23802359.2016.1144108780052933473444Open DOISearch in Google Scholar

Takahashi, J., & Yoshida, T. (2003). The origin of Japanese honey bee Apis cerana japonica inferred from mitochondrial DNA (in Japanese). Mitsubachi Kagaku (Honeybee Science), 24(2), 71-76.Search in Google Scholar

Tamura, K, & Nei, M. (1993). Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Molecular Biology and Evolution, 10(3), 512-526. DOI: 10.1093/molbev/msl14910.1093/molbev/msl149Open DOISearch in Google Scholar

Tamura, K., Battistuzzi, F.U., Billing-Ross, P., Murillo, O., Filipski, A., Kumar, S. (2012). Estimating divergence times in large molecular phylogenies. Proceedings of the National Academy of Sciences of the United States of America, 109(47), 19333-19338. DOI: 10.1073/pnas.121319910910.1073/pnas.1213199109Open DOISearch in Google Scholar

Tan, H.W., Liu, G.H., Dong, X., Lin, R.Q., Song, H.Q., Huang, S.Y., Yuan, Z.G., Zhao, X.Q. (2011). The Complete Mitochondrial Genome of the Asiatic Cavity-Nesting Honeybee Apis cerana (Hymenoptera: Apidae). PLoS ONE, 6(8), e23008. DOI: 10.1371/journal.pone.002300810.1371/journal.pone.0023008Open DOISearch in Google Scholar

Tan, K., Warrit, N., & Smith, D.R. (2007). Mitochondrial DNA diversity of Chineses Apis cerana. Apidologie, 38, 238-246. DOI: 10.1051/apido:200700810.1051/apido:2007008Open DOISearch in Google Scholar

Tanaka, H., Roubik, D.W., Kato, M., Liew, F., Gunsalam, G. (2001). Phylogenetic position of Apis nuluensis of northern Borneo and phylogeography of A. cerana as inferred from mitochondrial DNA sequences. Insectes Sociaux, 48(1), 44-51. DOI: 10.1007/PL0000174410.1007/PL00001744Open DOISearch in Google Scholar

Vavilov, N.I. (1951). The origin, variation, immunity and breeding of cultivated plants. (364 pp.). Waltham, Massachusetts: Chronica Botanica; New York: Stechert-Hafner.Search in Google Scholar

Voris, H.K. (2000). Maps of Pleistocene sea levels in Southeast Asia: shorelines, river systems and time durations. Journal of Biogeography, 27, 1153-1167. DOI: 10.1046/j.1365-2699.2000.00489.x10.1046/j.1365-2699.2000.00489.xOpen DOISearch in Google Scholar

Vung, N.N., Lee, M.L., Lee, M.Y., Kim, H.K., Kang, E.J., Kim, J.E., Choi, Y.S. (2017). Breeding and Selection for Resistance to Sacbrood Virus for Apis cerana. Journal of Apiculture, 32(4), 345-352. DOI: 10.17519/apiculture.2017.11.32.4.34510.17519/apiculture.2017.11.32.4.345Search in Google Scholar

Wallberg, A., Han, F., Wellhagen, G., Dahle, B., Kawata, M., Haddad, N., … Webster, M.T. (2014). A worldwide survey of genome sequence variation provides insight into the evolutionary history of the honeybee Apis mellifera. Nature Genetics, 46(10), 1081-1088. DOI: 10.1038/ng.307710.1038/ng.3077Search in Google Scholar

Wang, J.F., & Qiao, G.X. (2009). DNA barcoding of genus Toxoptera Koch (Hemiptera: Aphididae): Identification and molecular phylogeny inferred from mitochondrial COI sequences. Insect Science, 16(6), 475-484. DOI: 10.1111/j.1744-7917.2009.01270.x10.1111/j.1744-7917.2009.01270.xOpen DOISearch in Google Scholar

Willis, L.G., Winston, M.L., & Honda, B.M. (1992). Phylogenetic relationships in the honeybee (Genus Apis) as determined by the sequence of the cytochrome oxidase II region of mitochondrial DNA. Molecular Phylogenetics and Evolution, 1(3), 169-178. DOI: 10.1016/1055-7903(92)90013-710.1016/1055-7903(92)90013-7Open DOISearch in Google Scholar

Wilson, A.C. (1976). Gene regulation in evolution. In Ayala, F. J. editor, Molecular evolution. (225-234 pp.). Sunderland, Massachusetts: Sinauer Associates Inc.Search in Google Scholar

Xiao, J.H., Wang, N.X., Li, Y.W., Murphy, R.W., Wan, D.G., Niu, L.M., … Huang, D.W. (2010). Molecular approaches to identify cryptic species and polymorphic species within a complex community of fig wasps. PLoS ONE, 5(11). DOI: 10.1371/journal.pone.001506710.1371/journal.pone.0015067299396121124735Open DOISearch in Google Scholar

Zhao, W., Tan, K., Zhou, D., Wang, M., Cheng, C., Yu, Z., Miao, Y., He, S. (2013). Phylogeographic analysis of Apis cerana populations on Hainan Island and southern mainland China, based on mitochondrial DNA sequences. Apidologie, 45(1), 21-33. DOI: 10.1007/s13592-013-0223-810.1007/s13592-013-0223-8Open DOISearch in Google Scholar

Zhen-ming, J., Yang, G., Huang, S., Liang, S., Ren, Z. (1992). The advancement of beekeeping science and technology in China. In Verma, L. R., editor, Honeybees in mountain agriculture. (274 pp). New Delhi: Oxford and IBH Publishing.Search in Google Scholar