Genetic diversity detection of seed-propagated walnut ( L.) germplasm from Eastern Anatolia using SSR markers

Genotypes	Growth habit	Bearing habit	Tree vigour	Bud break	Nut weight (g)	Kernel ratio (g)	Kernel colour
KW1	Semi upright	Lateral	Medium	Late	9.28	51.4	Light amber
KW2	Spreading	Intermediate	Medium	Late	10.25	47.6	Light
KW3	Upright	Lateral	Strong	Mid Early	10.86	56.4	Light
KW4	Semi upright	Lateral	Medium	Early	8.76	55.3	Light
KW5	Spreading	Intermediate	Strong	Late	12.43	48.7	Light amber
KW6	Semi upright	Lateral	Medium	Late	11.78	62.5	Light
KW7	Semi upright	Lateral	Medium	Early	9.05	59.3	Light
KW8	Spreading	Lateral	Medium	Mid Early	13.20	48.3	Light amber
KW9	Upright	Lateral	Weak	Late	12.56	45.3	Light amber
KW10	Semi upright	Lateral	Medium	Late	8.94	59.9	Light
KW11	Spreading	Lateral	Strong	Early	11.46	55.9	Light
KW12	Semi upright	Intermediate	Medium	Late	9.44	56.9	Light amber
KW13	Upright	Lateral	Weak	Early	11.28	53.4	Light
KW14	Semi upright	Lateral	Strong	Late	11.67	60.4	Light amber
KW15	Spreading	Lateral	Strong	Mid Early	9.60	62.3	Light
KW16	Semi upright	Lateral	Medium	Early	12.54	43.8	Light
KW17	Upright	Lateral	Medium	Late	10.89	47.3	Very light
KW18	Semi upright	Intermediate	Medium	Mid Early	9.76	60.1	Light amber
KW19	Spreading	Lateral	Medium	Late	9.28	51.4	Light amber
KW20	Spreading	Lateral	Strong	Early	10.20	42.8	Very light
KW21	Spreading	Lateral	Medium	Late	11.55	61.8	Light
KW22	Semi upright	Lateral	Medium	Late	9.09	50.6	Light amber
KW23	Semi upright	Intermediate	Weak	Early	9.33	51.0	Light
KW24	Semi upright	Lateral	Medium	Late	12.44	56.3	Light
KW25	Upright	Intermediate	Strong	Early	9.80	55.0	Light amber
KW26	Semi upright	Lateral	Medium	Late	10.50	44.4	Light amber
KW27	Semi upright	Lateral	Strong	Mid Early	9.15	52.7	Light
KW28	Spreading	Lateral	Strong	Early	11.75	50.0	Light
KW29	Semi upright	Lateral	Medium	Early	10.80	57.0	Light amber
KW30	Semi upright	Lateral	Medium	Late	12.65	48.1	Light
KW31	Semi upright	Lateral	Medium	Late	9.28	51.4	Light amber
KW32	Upright	Intermediate	Weak	Early	8.88	52.5	Light
Sebin	Semi upright	Lateral	Medium	Late	11.80	58.9	Light amber
Bilecik	Semi upright	Lateral	Medium	Late	9.19	51.4	Light amber

SSRs, number of detected alleles, observed heterozygosity (Ho), expected heterozygosity (He) and PIC of 21 SSR markers on 32 walnut genotypes and 2 standard cultivars investigated

SSR primers	References	Number of alleles (n)	Observed heterozygosity (H_o)	Expected heterozygosity (H_e)	PIC
WGA001	Dangl et al. (2005)	7	0.47	0.58	0.67
WGA004	Woeste et al. (2002)	5	0.64	0.60	0.55
WGA005	Woeste et al. (2002)	6	0.80	0.71	0.77
WGA009	Dangl et al. (2005)	6	0.47	0.65	0.68
WGA027	Woeste et al. (2002)	3	0.55	0.49	0.72
WGA032	Woeste et al. (2002)	8	0.80	0.67	0.75
WGA054	Woeste et al. (2002)	9	0.53	0.60	0.58
WGA069	Woeste et al. (2002)	7	0.71	0.60	0.64
WGA071	Woeste et al. (2002)	4	0.52	0.49	0.69
WGA072	Woeste et al. (2002)	5	0.74	0.64	0.60
WGA079	Woeste et al. (2002)	4	0.58	0.53	0.55
WGA089	Dangl et al. (2005)	5	0.62	0.71	0.79
WGA118	Dangl et al. (2005)	5	0.58	0.80	0.65
WGA202	Dangl et al. (2005)	8	0.70	0.63	0.83
WGA225	Dangl et al. (2005)	5	0.41	0.64	0.62
WGA276	Dangl et al. (2005)	11	0.39	0.58	0.85
WGA321	Dangl et al. (2005)	8	0.70	0.60	0.54
WGA331	Dangl et al. (2005)	5	0.58	0.41	0.61
WGA332	Dangl et al. (2005)	6	0.68	0.61	0.58
WGA349	Dangl et al. (2005)	8	0.55	0.74	0.76
WGA376	Dangl et al. (2005)	10	0.52	0.59	0.80
Average		6.43	0.60	0.62	0.68

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Genetic diversity detection of seed-propagated walnut (Juglans regia L.) germplasm from Eastern Anatolia using SSR markers

Article Category: Research Article

Publié en ligne: 18 avr. 2020

Pages: 37 - 46

Reçu: 29 oct. 2019

Accepté: 13 janv. 2020

DOI: https://doi.org/10.2478/fhort-2020-0004

Mots clés
genetic diversity, landraces, local genotypes, SSR

© 2020 Emine Orhan et al., published by Sciendo

This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.

Figure 1

Figure 2

Some important morphological traits of walnut genotypes

SSRs, number of detected alleles, observed heterozygosity (Ho), expected heterozygosity (He) and PIC of 21 SSR markers on 32 walnut genotypes and 2 standard cultivars investigated

Genetic diversity detection of seed-propagated walnut (Juglans regia L.) germplasm from Eastern Anatolia using SSR markers

Article Category: Research Article

Publié en ligne: 18 avr. 2020

Pages: 37 - 46

Reçu: 29 oct. 2019

Accepté: 13 janv. 2020

DOI: https://doi.org/10.2478/fhort-2020-0004

Mots clésgenetic diversity, landraces, local genotypes, SSR

© 2020 Emine Orhan et al., published by Sciendo

This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.

Figure 1

Figure 2

Some important morphological traits of walnut genotypes

SSRs, number of detected alleles, observed heterozygosity (Ho), expected heterozygosity (He) and PIC of 21 SSR markers on 32 walnut genotypes and 2 standard cultivars investigated

Mots clés
genetic diversity, landraces, local genotypes, SSR