SNP | OR (95% CI) | p |
---|---|---|
0.43 (0.07-1.88) | 0.344 | |
data missing for 2 controls | 1.50 (0.36-7.23) | 0.754 |
1.00 (0.27-3.74) | 1.000 | |
1.40 (0.38-5.59) | 0.774 | |
1.25 (0.27-6.30) | 1.000 | |
data missing for 1 control | 0.43 (0.07-1.88) | 0.344 |
data missing for 1 control | 2.00 (0.29-22.11) | 0.687 |
SNP | Genotype | All patients N (%) | Cases N (%) | Controls N (%) | PHWE controls |
---|---|---|---|---|---|
CC | 28 (58.3) | 16 (66.7) | 12 (50) | 0.967 | |
CT | 17 (35.4) | 7 (29.2) | 10 (41.7) | ||
TT | 3 (6.3) | 1 (4.2) | 2 (8.3) | ||
data missing for 2 controls | GG | 10 (21.7) | 4 (16.7) | 6 (27.3) | 0.338 |
GA | 31 (67.4) | 18 (75) | 13 (59.1) | ||
AA | 5 (10.9) | 2 (8.3) | 3 (13.6) | ||
GG | 32 (66.7) | 16 (66.7) | 16 (66.7) | 0.834 | |
GA | 14 (29.2) | 7 (29.2) | 7 (29.2) | ||
AA | 2 (4.2) | 1 (4.2) | 1 (4.2) | ||
AA | 22 (45.8) | 10 (41.7) | 12 (50) | 0.432 | |
AG | 23 (47.9) | 12 (50) | 11 (45.8) | ||
GG | 3 (6.3) | 2 (8.3) | 1 (4.2) | ||
CC | 39 (81.3) | 19 (79.2) | 20 (83.3) | 0.106 | |
CT | 8 (16.7) | 5 (20.8) | 3 (12.5) | ||
TT | 1 (2.1) | / | 1 (4.2) | ||
data missing for 1 control | non-null | 23 (48.9) | 14 (58.3) | 9 (39.1) | |
null | 24 (51.1) | 10 (41.7) | 14 (60.9) | ||
data missing for 1 control | non-null | 39 (83) | 19 (79.2) | 20 (87) | |
null | 8 (17) | 5 (20.8) | 3 (13) |