Glucose | Yeast extract | Sodium acetate | Ethanol | Caproic acid production (g/l) | |
---|---|---|---|---|---|
1 | 1 | 1 | 1 | 1.76 | |
1 | 2 | 2 | 2 | 1.99 | |
1 | 3 | 3 | 3 | 1.81 | |
1 | 4 | 4 | 4 | 1.63 | |
2 | 1 | 2 | 3 | 2.33 | |
2 | 2 | 1 | 4 | 2.22 | |
2 | 3 | 4 | 1 | 2.79 | |
2 | 4 | 3 | 2 | 1.96 | |
3 | 1 | 3 | 4 | 1.87 | |
3 | 2 | 4 | 3 | 2.43 | |
3 | 3 | 1 | 2 | 2.12 | |
3 | 4 | 2 | 1 | 1.96 | |
4 | 1 | 4 | 2 | 2.44 | |
4 | 2 | 3 | 1 | 2.56 | |
4 | 3 | 2 | 4 | 2.08 | |
4 | 4 | 1 | 3 | 1.56 | |
K1 | 1.798 | 2.1 | 1.915 | 2.268 | |
K2 | 2.325 | 2.3 | 2.09 | 2.127 | |
K3 | 2.095 | 2.22 | 2.05 | 2.033 | |
K4 | 2.16 | 1.777 | 2.322 | 1.95 | |
R | 0.527 | 0.523 | 0.407 | 0.318 |
Features | BF-1 |
---|---|
Read-Num | 8,697,842 bp |
HQ reads | 8,663,546 bp |
Genome size | 2,968,377 bp |
G + C content | 43.52% |
ORF number | 3270 |
ORF density | 0.967 genes per kb |
ORF average length | 907,76 bp |
Intergenetic region length | 414,643 bp |
Coding percentage | 87.74% |
rRNA | 3 |
tRNA | 53 |
ncRNA | 113 |
Q value | 40 |
Q20-rate | 98.84 |
Q30-rate | 95.83 |
Contig N50 | 372,495 bp |
Scaffold N50 | 570,209 bp |
Contig total sequence length | 3,383,020 bp |
Scaffold total sequence length | 3,383,020 bp |
Level | Factor A (glucose g/l) | Factor B (yeast extract g/l) | Factor C (sodium acetate g/l) | Factor D (ethanol %) |
---|---|---|---|---|
1 | 10 | 10 | 2 | 1 |
2 | 20 | 20 | 4 | 2 |
3 | 30 | 30 | 6 | 3 |
4 | 40 | 40 | 8 | 4 |
Variance source | Sum of squares | Freedom | Mean square | Significance | ||
---|---|---|---|---|---|---|
Correction model | 1.766a | 12 | 0.147 | 14.537 | 0.025 | |
Intercept | 70.183 | 1 | 70.183 | 6,933.032 | 0.000 | |
Factor A | 0.583 | 3 | 0.194 | 19.182 | 0.018 | * |
Factor B | 0.616 | 3 | 0.205 | 20.268 | 0.017 | * |
Factor C | 0.345 | 3 | 0.115 | 11.354 | 0.038 | * |
Factor D | 0.223 | 3 | 0.074 | 7.342 | 0.068 | – |
Error | 0.030 | 3 | 0.010 | |||
Total | 71.979 | 16 | ||||
Corrected total | 1.796 | 15 |
Related genes | VFclass |
---|---|
Adherence | |
Antiphagocytosis | |
Biofilm formation | |
– | Toxin |
– | Exoenzyme |
Copper up take | |
Immune evasion | |
Protease | |
Regulation |
BF-1strain | |||
---|---|---|---|
Voges-Proskauer test | – | Mannitol | + |
MRtest | + | Fructose | + |
Gelatin hydrolysis | – | Stachyose | + |
Starch hydrolysis | + | Cellobiose | + |
Nitrate reduction | – | Xylose | + |
Lactose | + | Galactose | + |
Sucrose | + | Glycerin | – |
Raffinose | + | Mannose | + |