The small non-coding RNA rli106 contributes to the environmental adaptation and pathogenicity of Listeria monocytogenes

1Azam M.S., Vanderpool C.K.: Translation inhibition from a distance: The small RNA SgrS silences a ribosomal protein S1-dependent enhancer. Mol Microbiol 2020, 114, 391–408, doi: 10.1111/mmi.14514. Azam M.S. Vanderpool C.K. Translation inhibition from a distance: The small RNA SgrS silences a ribosomal protein S1-dependent enhancer Mol Microbiol 2020 114 391 408 doi 10.1111/mmi.14514.Open DOISearch in Google Scholar

2Berdejo D., Pagán E., Merino N., García-Gonzalo D., Pagán R.: Emerging mutant populations of Listeria monocytogenes EGD-e under selective pressure of Thymbra capitata essential oil question its use in food preservation. Food Res Int 2021, 145, 110403, doi: 10.1016/j.foodres.2021.110403. Berdejo D. Pagán E. Merino N. García-Gonzalo D. Pagán R. Emerging mutant populations of Listeria monocytogenes EGD-e under selective pressure of Thymbra capitata essential oil question its use in food preservation Food Res Int 2021 145 110403 doi 10.1016/j.foodres.2021.110403.Open DOISearch in Google Scholar

3Bouvier M., Sharma C.M., Mika F., Nierhaus K.H., Vogel J.: Small RNA binding to 5' mRNA coding region inhibits translational initiation. Mol Cell 2008, 32, 827–837, doi: 10.1016/j.molcel.2008.10.027 Bouvier M. Sharma C.M. Mika F. Nierhaus K.H. Vogel J. Small RNA binding to 5' mRNA coding region inhibits translational initiation Mol Cell 2008 32 827 837 doi 10.1016/j.molcel.2008.10.027Open DOISearch in Google Scholar

4Burke T.P., Loukitcheva A., Zemansky J., Wheeler R., Boneca I.G., Portnoy D.A.: Listeria monocytogenes is resistant to lysozyme through the regulation, not the acquisition, of cell wall-modifying enzymes. J Bacteriol 2014, 196, 3756–3767, doi: 10.1128/JB.02053-14. Burke T.P. Loukitcheva A. Zemansky J. Wheeler R. Boneca I.G. Portnoy D.A. Listeria monocytogenes is resistant to lysozyme through the regulation, not the acquisition, of cell wall-modifying enzymes J Bacteriol 2014 196 3756 3767 doi 10.1128/JB.02053-14.Open DOISearch in Google Scholar

5Cerutti F., Mallet L., Painset A., Hoede C., Moisan A., Bécavin C., Duval M., Dussurget O., Cossart P., Gaspin C., Chiapello H.: Unraveling the evolution and coevolution of small regulatory RNAs and coding genes in Listeria. BMC Genomics 2017, 18, 882, doi: 10.1186/s12864-017-4242-0. Cerutti F. Mallet L. Painset A. Hoede C. Moisan A. Bécavin C. Duval M. Dussurget O. Cossart P. Gaspin C. Chiapello H. Unraveling the evolution and coevolution of small regulatory RNAs and coding genes in Listeria. BMC Genomics 2017 18 882 doi 10.1186/s12864-017-4242-0.Open DOISearch in Google Scholar

6Dbeibo L., van Rensburg J.J., Smith S.N., Fortney K.R., Gangaiah D., Gao H., Marzoa J., Liu Y., Mobley H.L.T., Spinola S.M.: Evaluation of CpxRA as a Therapeutic Target for Uropathogenic Escherichia coli Infections. Infect Immun 2018, 86, e00798–17, doi: 10.1128/IAI.00798-17. Dbeibo L. van Rensburg J.J. Smith S.N. Fortney K.R. Gangaiah D. Gao H. Marzoa J. Liu Y. Mobley H.L.T. Spinola S.M. Evaluation of CpxRA as a Therapeutic Target for Uropathogenic Escherichia coli Infections Infect Immun 2018 86 e00798 17 doi 10.1128/IAI.00798-17.Open DOISearch in Google Scholar

7Dos Santos P.T., Menendez-Gil P., Sabharwal D., Christensen J.H., Brunhede M.Z., Lillebæk E.M.S., Kallipolitis B.H.: The Small Regulatory RNAs LhrC1-5 Contribute to the Response of Listeria monocytogenes to Heme Toxicity. Front Microbiol 2018, 9, 599, doi: 10.3389/fmicb.2018.00599. Dos Santos P.T. Menendez-Gil P. Sabharwal D. Christensen J.H. Brunhede M.Z. Lillebæk E.M.S. Kallipolitis B.H. The Small Regulatory RNAs LhrC1-5 Contribute to the Response of Listeria monocytogenes to Heme Toxicity Front Microbiol 2018 9 599 doi 10.3389/fmicb.2018.00599.Open DOISearch in Google Scholar

8Frantz R., Teubner L., Schultze T., La Pietra L., Müller C., Gwozdzinski K., Pillich H., Hain T., Weber-Gerlach M., Panagiotidis G.D., Mostafa A., Weber F., Rohde M., Pleschka S., Chakraborty T., Abu Mraheil M.: The secRNome of Listeria monocytogenes Harbors Small Noncoding RNAs That Are Potent Inducers of Beta Interferon. mBio 2019, 10, e01223–19, doi: 10.1128/mBio.01223-19. Frantz R. Teubner L. Schultze T. La Pietra L. Müller C. Gwozdzinski K. Pillich H. Hain T. Weber-Gerlach M. Panagiotidis G.D. Mostafa A. Weber F. Rohde M. Pleschka S. Chakraborty T. Abu Mraheil M. The secRNome of Listeria monocytogenes Harbors Small Noncoding RNAs That Are Potent Inducers of Beta Interferon mBio 2019 10 e01223 19 doi 10.1128/mBio.01223-19.Open DOISearch in Google Scholar

9Ignatov D., Vaitkevicius K., Durand S., Cahoon L., Sandberg S.S., Liu X., Kallipolitis B.H., Rydén P., Freitag N., Condon C., Johansson J.: An mRNA-mRNA Interaction Couples Expression of a Virulence Factor and Its Chaperone in Listeria monocytogenes. Cell Rep 2020, 30, 4027–4040, doi: 10.1016/j.celrep.2020.03.006. Ignatov D. Vaitkevicius K. Durand S. Cahoon L. Sandberg S.S. Liu X. Kallipolitis B.H. Rydén P. Freitag N. Condon C. Johansson J. An mRNA-mRNA Interaction Couples Expression of a Virulence Factor and Its Chaperone in Listeria monocytogenes. Cell Rep 2020 30 4027 4040 doi 10.1016/j.celrep.2020.03.006.Open DOISearch in Google Scholar

10Jiang X., Ren S., Geng Y., Jiang C., Liu G., Wang H., Yu T., Liang Y.: Role of the VirSR-VirAB system in biofilm formation of Listeria monocytogenes EGD-e. Food Res Int 2021, 145, 110394, doi: 10.1016/j.foodres.2021.110394. Jiang X. Ren S. Geng Y. Jiang C. Liu G. Wang H. Yu T. Liang Y. Role of the VirSR-VirAB system in biofilm formation of Listeria monocytogenes EGD-e Food Res Int 2021 145 110394 doi 10.1016/j.foodres.2021.110394.Open DOISearch in Google Scholar

11Knudsen G.M., Olsen J.E., Dons L.: Characterization of DegU, a response regulator in Listeria monocytogenes, involved in regulation of motility and contributes to virulence. FEMS Microbiol Lett 2004, 240, 171–179, doi: 10.1016/j.femsle.2004.09.039. Knudsen G.M. Olsen J.E. Dons L. Characterization of DegU, a response regulator in Listeria monocytogenes, involved in regulation of motility and contributes to virulence FEMS Microbiol Lett 2004 240 171 179 doi 10.1016/j.femsle.2004.09.039.Open DOISearch in Google Scholar

12Lebreton A., Cossart P.: RNA- and protein-mediated control of Listeria monocytogenes virulence gene expression. RNA Biol 2017, 14, 460–470, doi: 10.1080/15476286.2016.1189069. Lebreton A. Cossart P. RNA- and protein-mediated control of Listeria monocytogenes virulence gene expression RNA Biol 2017 14 460 470 doi 10.1080/15476286.2016.1189069.Open DOISearch in Google Scholar

13Liu Y., Sun W., Sun T., Gorris L.G.M., Wang X., Liu B., Dong Q.: The prevalence of Listeria monocytogenes in meat products in China: A systematic literature review and novel meta-analysis approach. Int J Food Microbiol 2020, 312, 108358, doi: 10.1016/j.ijfoodmicro.2019.108358. Liu Y. Sun W. Sun T. Gorris L.G.M. Wang X. Liu B. Dong Q. The prevalence of Listeria monocytogenes in meat products in China: A systematic literature review and novel meta-analysis approach Int J Food Microbiol 2020 312 108358 doi 10.1016/j.ijfoodmicro.2019.108358.Open DOISearch in Google Scholar

14Marinho C.M., Dos Santos P.T., Kallipolitis B.H., Johansson J., Ignatov D., Guerreiro D.N., Piveteau P., O’Byrne C.P.: The σB-dependent regulatory sRNA Rli47 represses isoleucine biosynthesis in Listeria monocytogenes through a direct interaction with the ilvA transcript. RNA Biol 2019, 16, 1424–1437, doi: 10.1080/15476286.2019.1632776. Marinho C.M. Dos Santos P.T. Kallipolitis B.H. Johansson J. Ignatov D. Guerreiro D.N. Piveteau P. O’Byrne C.P. The σB-dependent regulatory sRNA Rli47 represses isoleucine biosynthesis in Listeria monocytogenes through a direct interaction with the ilvA transcript RNA Biol 2019 16 1424 1437 doi 10.1080/15476286.2019.1632776.Open DOISearch in Google Scholar

15Mujahid S., Bergholz T.M., Oliver H.F., Boor K.J., Wiedmann M.: Exploration of the role of the non-coding RNA SbrE in L. monocytogenes stress response. Int J Mol Sci 2012, 14, 378–393, doi: 10.3390/ijms14010378. Mujahid S. Bergholz T.M. Oliver H.F. Boor K.J. Wiedmann M. Exploration of the role of the non-coding RNA SbrE in L. monocytogenes stress response Int J Mol Sci 2012 14 378 393 doi 10.3390/ijms14010378.Open DOISearch in Google Scholar

16Müller P., Gimpel M., Wildenhain T., Brantl S.: A new role for CsrA: promotion of complex formation between an sRNA and its mRNA target in Bacillus subtilis. RNA Biol 2019, 16, 972–987, doi: 10.1080/15476286.2019.1605811. Müller P. Gimpel M. Wildenhain T. Brantl S. A new role for CsrA: promotion of complex formation between an sRNA and its mRNA target in Bacillus subtilis. RNA Biol 2019 16 972 987 doi 10.1080/15476286.2019.1605811.Open DOISearch in Google Scholar

17Overlöper A., Kraus A., Gurski R., Wright P.R., Georg J., Hess W.R., Narberhaus F.: Two separate modules of the conserved regulatory RNA AbcR1 address multiple target mRNAs in and outside of the translation initiation region. RNA Biol 2014, 11, 624–640, doi: 10.4161/rna.29145. Overlöper A. Kraus A. Gurski R. Wright P.R. Georg J. Hess W.R. Narberhaus F. Two separate modules of the conserved regulatory RNA AbcR1 address multiple target mRNAs in and outside of the translation initiation region RNA Biol 2014 11 624 640 doi 10.4161/rna.29145.Open DOISearch in Google Scholar

18Peng Y.L., Meng Q.L., Qiao J., Xie K., Chen C., Liu T.L., Hu Z.X., Ma Y., Cai X.P., Chen C.F.: The Regulatory Roles of ncRNA Rli60 in Adaptability of Listeria monocytogenes to Environmental Stress and Biofilm Formation. Curr Microbiol 2016, 73, 77–83, doi: 10.1007/s00284-016-1028-6. Peng Y.L. Meng Q.L. Qiao J. Xie K. Chen C. Liu T.L. Hu Z.X. Ma Y. Cai X.P. Chen C.F. The Regulatory Roles of ncRNA Rli60 in Adaptability of Listeria monocytogenes to Environmental Stress and Biofilm Formation Curr Microbiol 2016 73 77 83 doi 10.1007/s00284-016-1028-6.Open DOISearch in Google Scholar

19Pombinho R., Vieira A., Camejo A., Archambaud C., Cossart P., Sousa S., Cabanes D.: Virulence gene repression promotes Listeria monocytogenes systemic infection. Gut Microbes 2020, 11, 868–881, doi: 10.1080/19490976.2020.1712983. Pombinho R. Vieira A. Camejo A. Archambaud C. Cossart P. Sousa S. Cabanes D. Virulence gene repression promotes Listeria monocytogenes systemic infection Gut Microbes 2020 11 868 881 doi 10.1080/19490976.2020.1712983.Open DOISearch in Google Scholar

20Quereda, J.J., Ortega A.D., Pucciarelli M.G., García-Del Portillo F.: The Listeria Small RNA Rli27 Regulates a Cell Wall Protein inside Eukaryotic Cells by Targeting a Long 5′-UTR Variant. PLoS Genet 2014, 10, e1004765, doi: 10.1371/journal.pgen.1004765. Quereda J.J. Ortega A.D. Pucciarelli M.G. García-Del Portillo F. The Listeria Small RNA Rli27 Regulates a Cell Wall Protein inside Eukaryotic Cells by Targeting a Long 5′-UTR Variant PLoS Genet 2014 10 e1004765 doi 10.1371/journal.pgen.1004765.Open DOISearch in Google Scholar

21Radoshevich L., Cossart P.: Listeria monocytogenes: towards a complete picture of its physiology and pathogenesis. Nat Rev Microbiol 2018, 16, 32–46, doi: 10.1038/nrmicro.2017.126. Radoshevich L. Cossart P. Listeria monocytogenes towards a complete picture of its physiology and pathogenesis Nat Rev Microbiol 2018 16 32 46 doi 10.1038/nrmicro.2017.126.Open DOISearch in Google Scholar

22Roberts B.N., Chakravarty D., Gardner J.C. 3rd, Ricke S.C., Donaldson J.R.: Listeria monocytogenes Response to Anaerobic Environments. Pathogens 2020, 9, 210, doi: 10.3390/pathogens9030210. Roberts B.N. Chakravarty D. Gardner J.C. 3rd Ricke S.C. Donaldson J.R. Listeria monocytogenes Response to Anaerobic Environments Pathogens 2020 9 210 doi 10.3390/pathogens9030210.Open DOISearch in Google Scholar

23Schneider C.A., Rasband W.S., Eliceiri K.W.: NIH Image to ImageJ: 25 years of image analysis. Nat Methods 2012, 9, 671–675, doi: 10.1038/nmeth.2089. Schneider C.A. Rasband W.S. Eliceiri K.W. NIH Image to ImageJ: 25 years of image analysis Nat Methods 2012 9 671 675 doi 10.1038/nmeth.2089.Open DOISearch in Google Scholar

24Tamburro M., Sammarco M.L., Fanelli I., Ripabelli G.: Characterization of Listeria monocytogenes serovar 1/2a, 1/2b, 1/2c and 4b by high resolution melting analysis for epidemiological investigations. Int J Food Microbiol 2019, 310, 108289, doi: 10.1016/j.ijfoodmicro.2019.108289. Tamburro M. Sammarco M.L. Fanelli I. Ripabelli G. Characterization of Listeria monocytogenes serovar 1/2a, 1/2b, 1/2c and 4b by high resolution melting analysis for epidemiological investigations Int J Food Microbiol 2019 310 108289 doi 10.1016/j.ijfoodmicro.2019.108289.Open DOISearch in Google Scholar

25Taneja S., Dutta T.: On a stake-out: Mycobacterial small RNA identification and regulation. Noncoding RNA Res 2019, 4, 86–95, doi: 10.1016/j.ncrna.2019.05.001. Taneja S. Dutta T. On a stake-out: Mycobacterial small RNA identification and regulation Noncoding RNA Res 2019 4 86 95 doi 10.1016/j.ncrna.2019.05.001.Open DOISearch in Google Scholar

26Wurtzel O., Sesto N., Mellin J.R., Karunker I., Edelheit S., Bécavin C., Archambaud C., Cossart P., Sorek R.: Comparative transcriptomics of pathogenic and non-pathogenic Listeria species. Mol Syst Biol 2012, 8, 583, doi: 10.1038/msb.2012.11. Wurtzel O. Sesto N. Mellin J.R. Karunker I. Edelheit S. Bécavin C. Archambaud C. Cossart P. Sorek R. Comparative transcriptomics of pathogenic and non-pathogenic Listeria species Mol Syst Biol 2012 8 583 doi 10.1038/msb.2012.11.Open DOISearch in Google Scholar

27Yi Z., Wang D., Xin S., Zhou D., Li T., Tian M., Qi J., Ding C., Wang S., Yu S.: The CpxR regulates type VI secretion system 2 expression and facilitates the interbacterial competition activity and virulence of avian pathogenic Escherichia coli. Vet Res 2019, 50, 40, doi: 10.1186/s13567-019-0658-7. Yi Z. Wang D. Xin S. Zhou D. Li T. Tian M. Qi J. Ding C. Wang S. Yu S. The CpxR regulates type VI secretion system 2 expression and facilitates the interbacterial competition activity and virulence of avian pathogenic Escherichia coli. Vet Res 2019 50 40 doi 10.1186/s13567-019-0658-7.Open DOISearch in Google Scholar

28Zetzmann M., Bucur F.I., Crauwels P., Borda D., Nicolau A.I., Grigore-Gurgu L., Seibold G.M., Riedel C.U.: Characterization of the biofilm phenotype of a Listeria monocytogenes mutant deficient in agr peptide sensing. Microbiologyopen 2019, 8, e00826, doi: 10.1002/mbo3.826. Zetzmann M. Bucur F.I. Crauwels P. Borda D. Nicolau A.I. Grigore-Gurgu L. Seibold G.M. Riedel C.U. Characterization of the biofilm phenotype of a Listeria monocytogenes mutant deficient in agr peptide sensing Microbiologyopen 2019 8 e00826 doi 10.1002/mbo3.826.Open DOISearch in Google Scholar