Uneingeschränkter Zugang

A Comparative Study: Taxonomic Grouping of Alkaline Protease Producing Bacilli


Zitieren

Arellano-Carbajal F. and J. Olmos-Soto. 2002. Thermostable α-1, 4-and α-1, 6-glucosidase enzymes from Bacillus sp. isolated from a marine environment. World J. Microb. Biot. 18: 791–795. Search in Google Scholar

Cihan A.C. 2013. Taxonomic classification of Anoxybacillus isolates from geothermal regions in Turkey by 16S rRNA gene sequences and ARDRA, ITS-PCR, Rep-PCR analyses. Pol. J. Microbiol. 62: 149–163. Search in Google Scholar

Cihan A.C., B. Ozcan, N. Tekin and C. Cokmus. 2011. Phylogenetic diversity of isolates belonging to genera Geobacillus and Aeribacillus isolated from different geothermal regions of Turkey. World J. Microb. Biot. 27: 2683–2696.10.1007/s11274-011-0742-2 Search in Google Scholar

Clarridge J.E. 2004. Impact of 16S rRNA gene sequence analysis for identification of bacteria on clinical microbiology and infectious diseases. Clin. Microbiol. Rev. 17: 840–62.10.1128/CMR.17.4.840-862.2004 Search in Google Scholar

Claus D. and C.W. Berkeley. 1986. The genus Bacillus, pp. 1105– 1139. In: Sneath pHA (eds). Bergey’s Manual of Systematic Bacteriology. Volume 2. Williams, Wilkins, Baltimore. Search in Google Scholar

Daffonchio D, S. Borin, A.D. Consolandi, D. Mora, P.L. Manachini and C. Sorlini. 1998a. 16S–23S rRNA internal transcribed spacers as molecular markers for the species of the 16S rRNA group I of the genus Bacillus. FEMS Microbiol. Lett. 163: 229–236.10.1111/j.1574-6968.1998.tb13050.x Search in Google Scholar

Daffonchio D., S. Borin, G. Frova, P.L. Manachini and C. Sorlini. 1998b. PCR fingerprinting of whole genomes: the spacers between the 16S and 23S rRNA genes and of intergenic tRNA gene regions reveal a different intraspecific genomic variability of Bacillus cereus and Bacillus licheniformis. Int. J. Syst. Bacteriol. 48: 107–116.10.1099/00207713-48-1-107 Search in Google Scholar

De Clerck E. and P. De Vos. 2004. Genotypic diversity among Bacillus licheniformis strains from various sources. FEMS Microbiol. Lett. 231: 91–98.10.1016/S0378-1097(03)00935-2 Search in Google Scholar

Denizci A.A., D. Kazan, E.C.A Abeln and A. Erarslan. 2004. Newly isolated Bacillus clausii GMBAE 42: an alkaline protease producer capable to grow under higly alkaline conditions. J. Appl. Microbiol. 96: 320–327.10.1046/j.1365-2672.2003.02153.x14723693 Search in Google Scholar

Felsenstein J. 1985. Confidence-limits on phylogenies – an approach using the bootstrap. Evolution. 39: 783–791.10.1111/j.1558-5646.1985.tb00420.x28561359 Search in Google Scholar

Freitas D.B., M.P. Reis, C.I. Lima-Bittencourt, P.S. Costa, P.S. Assis, E. Chartone-Souza and A.M.A. Nascimento. 2008. Genotypic and phenotypic diversity of Bacillus spp. isolated from steel plant waste. BMC Res. Notes. 1: 92.10.1186/1756-0500-1-92258845318928552 Search in Google Scholar

Gessesse A. and B.A. Gashe BA. 1997. Production of alkaline protease by an alkaliphilic bacteria isolated from an alkaline soda lake. Biotechnol. Lett. 19: 479–481.10.1023/A:1018308513853 Search in Google Scholar

Haddar A., R. Agrebi, A. Bougatef, N. Hmidet, A. Sellami-Kamoun and M. Nasri. 2009. Two detergent stable alkaline serineproteases from Bacillus mojavensis A21: purification, characterization and potential application as a laundry detergent additive. Bioresour. Technol. 100: 3366–3373. Search in Google Scholar

Horikoshi K. 1999. Alkaliphiles: some applications of their products for biotechnology. Microbiol. Mol. Biol. Rev. 63: 735–50.10.1128/MMBR.63.4.735-750.19999897510585964 Search in Google Scholar

Huang T.-P., D.D.-S. Tzeng, A.C.L. Wong, C.-H. Chen, K.-M. Lu. Y.-H. Lee, W.-D. Huang, B.-F. Hwang and K.-C. Tzeng. 2012. DNA polymorphisms and biocontrol of Bacillus antagonistic to citrus bacterial canker with indication of the interference of phyllosphere biofilms. PLoS ONE. 7: 421–424.10.1371/journal.pone.0042124 Search in Google Scholar

Ito S., T. Kobayashi, K. Ara, K. Ozaki, S. Kawai and Y. Hatada. 1998. Alkaline detergent enzymes from alkaliphiles: enzymatic properties, genetics, and structures. Extremophiles 2: 185–190.10.1007/s007920050059 Search in Google Scholar

Klappenbach J.A. and J.M. Dunbar. 2000. rRNA operon copy number reflects ecological strategies of bacteria. Appl. Environ. Microb. 66: 1328–133310.1128/AEM.66.4.1328-1333.2000 Search in Google Scholar

Kumar C.G. and H. Takagi. 1999. Microbial alkaline proteases: from a bioindustrial viewpoint. Biotechnol. Adv. 17: 561–59410.1016/S0734-9750(99)00027-0 Search in Google Scholar

Logan N.A., O. Berge, A.H. Bishop, H.J. Busse, P. De Vos, D. Fritze, M. Heyndrickx, P. Kämpfer, L. Rabinovitch, M.S. Salkinoja-Salonen and others. 2009. Proposed minimal standards for describing new taxa of aerobic, endospore-forming bacteria. Int. J. Syst. Evol. Microbiol. 59: 2114–2121. Search in Google Scholar

Mora D., M.G. Fortina, G. Nicastro, C. Parini and P.L. Manachini. 1998. Genotypic characterization of thermophilic bacilli: a study on new soil isolates and several reference strains. Res. Microbiol. 149: 711–722.10.1016/S0923-2508(99)80018-7 Search in Google Scholar

Nielsen P., D. Fritze and F.G. Priest. 1995. Phenetic diversity of alkaliphilic Bacillus strains: proposal for nine new species. Microbiology 141: 1745–1761.10.1099/13500872-141-7-1745 Search in Google Scholar

Niyonzima F.N. and S.S. More. 2014. Concomitant production of detergent compatible enzymes by Bacillus flexus XJU-1. Braz. J. Microbiol. 45: 903–910.10.1590/S1517-83822014000300020420497525477924 Search in Google Scholar

Saitou N. and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406–425. Search in Google Scholar

Sari E., E. Loğoğlu and A. Öktemer. 2015. Purification and characterization of organic solvent stable serine alkaline protease from newly isolated Bacillus circulans M34. Biomed. Chromatogr. 29: 1356–1363.10.1002/bmc.343125677873 Search in Google Scholar

Stackebrandt E., W. Frederiksen, G.M. Garrity, P.A Grimont, P. Kämpfer, M.C. Maiden, X. Nesme, R. Rosselló-Mora, J. Swings, H.G. Trüper and others. 2002. Report of the ad hoc committee for the re-evaluation of the species definition in bacteriology. Int. J. Syst. Evol. Microbiol. 52: 1043–1047.10.1099/00207713-52-3-104312054223 Search in Google Scholar

Suzuki Y., T. Kishigami and S. Abe. 1976. Production of extracellular alpha-glucosidase by a thermophilic Bacillus species. Appl. Environ. Microbiol. 31: 807–812.10.1128/aem.31.6.807-812.19761698387193 Search in Google Scholar

Tamura K., M. Nei and S. Kumar. 2004. Prospects for inferring very large phylogenies by using the neighbor-joining method. Proc. Natl. Acad. Sci. USA 101: 11030–11035.10.1073/pnas.040420610149198915258291 Search in Google Scholar

Tamura K., J. Dudley, M. Nei and S. Kumar. 2007. MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24: 1596–1599.10.1093/molbev/msm09217488738 Search in Google Scholar

Tekin N., A.C. Cihan, Z.S. Takaç, C. Yagci, K. Tunc and C. Cokmus. 2012. Alkaline protease production of Bacillus cohnii APT5. Turk. J. Biol. 36: 430–440.10.3906/biy-1104-6 Search in Google Scholar

Versalovic J., M. Schneider and F.J. De Bruijn. 1994. Genomic fingerprinting of bacteria using repetitive sequence-based polymerase chain reaction. Method. Mol. Cell. Biol. 5: 25–40. Search in Google Scholar

White D., R.J. Sharpand and F.G. Priest. 1993. A polyphasic taxonomic study of thermophilic bacilli from a wide geographical area. Antonie Van Leeuwenhoek. 64: 357–386.10.1007/BF008730938085796 Search in Google Scholar

eISSN:
2544-4646
Sprache:
Englisch
Zeitrahmen der Veröffentlichung:
4 Hefte pro Jahr
Fachgebiete der Zeitschrift:
Biologie, Mikrobiologie und Virologie