This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.
Badran M, Khalyfa A, Ericsson A, Gozal D. Fecal microbiota transplantation from mice exposed to chronic intermittent hypoxia elicits sleep disturbances in naïve mice. Exp Neurol. 2020 Dec;334:113439. https://doi.org/10.1016/j.expneurol.2020.113439BadranMKhalyfaAEricssonAGozalDFecal microbiota transplantation from mice exposed to chronic intermittent hypoxia elicits sleep disturbances in naïve mice2020334113439https://doi.org/10.1016/j.expneurol.2020.11343910.1016/j.expneurol.2020.113439Search in Google Scholar
Becker SP, Luebbe AM, Langberg JM. Attention-deficit/hyperactivity disorder dimensions and sluggish cognitive tempo symptoms in relation to college students’ sleep functioning. Child Psychiatry Hum Dev. 2014 Dec;45(6):675–685. https://doi.org/10.1007/s10578-014-0436-8BeckerSPLuebbeAMLangbergJMAttention-deficit/hyperactivity disorder dimensions and sluggish cognitive tempo symptoms in relation to college students’ sleep functioning2014456675685https://doi.org/10.1007/s10578-014-0436-810.1007/s10578-014-0436-8Search in Google Scholar
Benedict C, Vogel H, Jonas W, Woting A, Blaut M, Schürmann A, Cedernaes J. Gut microbiota and glucometabolic alterations in response to recurrent partial sleep deprivation in normal-weight young individuals. Mol Metab. 2016 Oct 24;5(12):1175–1186. https://doi.org/10.1016/j.molmet.2016.10.003BenedictCVogelHJonasWWotingABlautMSchürmannACedernaesJGut microbiota and glucometabolic alterations in response to recurrent partial sleep deprivation in normal-weight young individuals2016Oct 2451211751186https://doi.org/10.1016/j.molmet.2016.10.00310.1016/j.molmet.2016.10.003Search in Google Scholar
Bowers SJ, Vargas F, González A, He S, Jiang P, Dorrestein PC, Knight R, Wright KP Jr, Lowry CA, Fleshner M, et al. Repeated sleep disruption in mice leads to persistent shifts in the fecal microbiome and metabolome. PLoS One. 2020 Feb 20;15(2):e0229001. https://doi.org/10.1371/journal.pone.0229001BowersSJVargasFGonzálezAHeSJiangPDorresteinPCKnightRWrightKP JrLowryCAFleshnerMet alRepeated sleep disruption in mice leads to persistent shifts in the fecal microbiome and metabolome2020Feb 20152e0229001https://doi.org/10.1371/journal.pone.022900110.1371/journal.pone.0229001Search in Google Scholar
Buysse DJ, Reynolds CF 3rd, Monk TH, Berman SR, Kupfer DJ. The Pittsburgh Sleep Quality Index: a new instrument for psychiatric practice and research. Psychiatry Res. 1989 May;28(2):193–213. https://doi.org/10.1016/0165-1781(89)90047-4BuysseDJReynoldsCF 3rdMonkTHBermanSRKupferDJThe Pittsburgh Sleep Quality Index: a new instrument for psychiatric practice and research1989282193213https://doi.org/10.1016/0165-1781(89)90047-410.1016/0165-1781(89)90047-4Search in Google Scholar
Carney CE, Edinger JD, Meyer B, Lindman L, Istre T. Daily activities and sleep quality in college students. Chronobiol Int. 2006; 23(3):623–623. https://doi.org/10.1080/07420520600650695CarneyCEEdingerJDMeyerBLindmanLIstreTDaily activities and sleep quality in college students2006233623623https://doi.org/10.1080/0742052060065069510.1080/0742052060065069516753946Search in Google Scholar
Dong X, Kleiner M, Sharp CE, Thorson E, Li C, Liu D, Strous M. Fast and simple analysis of MiSeq amplicon sequencing data with MetaAmp. Front Microbiol. 2017 Aug 3;8:1461. https://doi.org/10.3389/fmicb.2017.01461DongXKleinerMSharpCEThorsonELiCLiuDStrousMFast and simple analysis of MiSeq amplicon sequencing data with MetaAmp2017Aug 381461https://doi.org/10.3389/fmicb.2017.0146110.3389/fmicb.2017.01461554094928824589Search in Google Scholar
El Aidy S, Bolsius YG, Raven F, Havekes R. A brief period of sleep deprivation leads to subtle changes in mouse gut microbiota. J Sleep Res. 2020 Dec;29(6):e12920. https://doi.org/10.1111/jsr.12920ElAidy SBolsiusYGRavenFHavekesRA brief period of sleep deprivation leads to subtle changes in mouse gut microbiota2020296e12920https://doi.org/10.1111/jsr.1292010.1111/jsr.12920775718131515894Search in Google Scholar
Guo S, Sun W, Liu C, Wu S. Structural validity of the Pittsburgh Sleep Quality Index in Chinese undergraduate students. Front Psychol. 2016 Aug 8;7:1126. https://doi.org/10.3389/fpsyg.2016.01126GuoSSunWLiuCWuSStructural validity of the Pittsburgh Sleep Quality Index in Chinese undergraduate students2016Aug 871126https://doi.org/10.3389/fpsyg.2016.0112610.3389/fpsyg.2016.01126497612427551270Search in Google Scholar
Hamer HM, Jonkers D, Venema K, Vanhoutvin S, Troost FJ, Brummer RJ. Review article: the role of butyrate on colonic function. Aliment Pharmacol Ther. 2008 Jan 15;27(2):104–119. https://doi.org/10.1111/j.1365-2036.2007.03562.xHamerHMJonkersDVenemaKVanhoutvinSTroostFJBrummerRJReview article: the role of butyrate on colonic function2008Jan 15272104119https://doi.org/10.1111/j.1365-2036.2007.03562.x10.1111/j.1365-2036.2007.03562.x17973645Search in Google Scholar
Heath AM, Haszard JJ, Galland BC, Lawley B, Rehrer NJ, Drummond LN, Sims IM, Taylor RW, Otal A, Taylor B, et al. Association between the faecal short-chain fatty acid propionate and infant sleep. Eur J Clin Nutr. 2020 Sep;74(9):1362–1365. https://doi.org/10.1038/s41430-019-0556-0HeathAMHaszardJJGallandBCLawleyBRehrerNJDrummondLNSimsIMTaylorRWOtalATaylorBet alAssociation between the faecal short-chain fatty acid propionate and infant sleep202074913621365https://doi.org/10.1038/s41430-019-0556-010.1038/s41430-019-0556-031969698Search in Google Scholar
Irwin MR. Why sleep is important for health: a psychoneuroimmunology perspective. Annu Rev Psychol. 2015 Jan 3;66:143–172. https://doi.org/10.1146/annurev-psych-010213-115205IrwinMRWhy sleep is important for health: a psychoneuroimmunology perspective2015Jan 366143172https://doi.org/10.1146/annurev-psych-010213-11520510.1146/annurev-psych-010213-115205496146325061767Search in Google Scholar
Kenney SR, LaBrie JW, Hummer JF, Pham AT. Global sleep quality as a moderator of alcohol consumption and consequences in college students. Addict Behav. 2012 Apr;37(4):507–512. https://doi.org/10.1016/j.addbeh.2012.01.006KenneySRLaBrieJWHummerJFPhamATGlobal sleep quality as a moderator of alcohol consumption and consequences in college students2012374507512https://doi.org/10.1016/j.addbeh.2012.01.00610.1016/j.addbeh.2012.01.006432977822285119Search in Google Scholar
Ko CY, Liu QQ, Su HZ, Zhang HP, Fan JM, Yang JH, Hu AK, Liu YQ, Chou D, Zeng YM. Gut microbiota in obstructive sleep apnea-hypopnea syndrome: disease-related dysbiosis and metabolic comorbidities. Clin Sci (Lond). 2019 Apr 12;133(7):905–917. https://doi.org/10.1042/CS20180891KoCYLiuQQSuHZZhangHPFanJMYangJHHuAKLiuYQChouDZengYMGut microbiota in obstructive sleep apnea-hypopnea syndrome: disease-related dysbiosis and metabolic comorbidities2019Apr 121337905917https://doi.org/10.1042/CS2018089110.1042/CS20180891646530230957778Search in Google Scholar
Kozich JJ, Westcott SL, Baxter NT, Highlander SK, Schloss PD. Development of a dual-index sequencing strategy and curation pipeline for analyzing amplicon sequence data on the MiSeq Illumina sequencing platform. Appl Environ Microbiol. 2013 Sep; 79(17): 5112–5120. https://doi.org/10.1128/AEM.01043-13KozichJJWestcottSLBaxterNTHighlanderSKSchlossPDDevelopment of a dual-index sequencing strategy and curation pipeline for analyzing amplicon sequence data on the MiSeq Illumina sequencing platform2013791751125120https://doi.org/10.1128/AEM.01043-1310.1128/AEM.01043-13375397323793624Search in Google Scholar
Langille MG, Zaneveld J, Caporaso JG, McDonald D, Knights D, Reyes JA, Clemente JC, Burkepile DE, Vega Thurber RL, Knight R, et al. Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences. Nat Biotechnol. 2013 Sep;31(9):814–821. https://doi.org/10.1038/nbt.2676LangilleMGZaneveldJCaporasoJGMcDonaldDKnightsDReyesJAClementeJCBurkepileDEVegaThurber RLKnightRet alPredictive functional profiling of microbial communities using 16S rRNA marker gene sequences2013319814821https://doi.org/10.1038/nbt.267610.1038/nbt.2676381912123975157Search in Google Scholar
Lendrum J, Seebach B, Klein B, Liu S. Sleep and the gut microbiome: antibiotic-induced depletion of the gut microbiota reduces nocturnal sleep in mice. bioRxiv. 2017 Oct;199075. https://doi.org/10.1101/199075LendrumJSeebachBKleinBLiuSSleep and the gut microbiome: antibiotic-induced depletion of the gut microbiota reduces nocturnal sleep in mice2017199075https://doi.org/10.1101/19907510.1101/199075Search in Google Scholar
Li L, Lu J, Xue W, Wang L, Zhai Y, Fan Z, Wu G, Fan F, Li J, Zhang C, et al. Target of obstructive sleep apnea syndrome merge lung cancer: based on big data platform. Oncotarget. 2017 Mar 28; 8(13):21567–21578. https://doi.org/10.18632/oncotarget.15372LiLLuJXueWWangLZhaiYFanZWuGFanFLiJZhangCet alTarget of obstructive sleep apnea syndrome merge lung cancer: based on big data platform2017Mar 288132156721578https://doi.org/10.18632/oncotarget.1537210.18632/oncotarget.15372540060728423489Search in Google Scholar
Lin A, Shih C-T, Chu H-F, Chen C-W, Cheng Y-T, Wu C-C, Yang CC, Tsai Y-C. Lactobacillus fermentum PS150 promotes non-rapid eye movement sleep in the first night effect of mice. Sci Rep. 2021 Aug 11;11(1):16313. https://doi.org/10.1038/s41598-021-95659-3LinAShihC-TChuH-FChenC-WChengY-TWuC-CYangCCTsaiY-CLactobacillus fermentum PS150 promotes non-rapid eye movement sleep in the first night effect of mice2021Aug 1111116313https://doi.org/10.1038/s41598-021-95659-310.1038/s41598-021-95659-3835794534381098Search in Google Scholar
Liu B, Lin W, Chen S, Xiang T, Yang Y, Yin Y, Xu G, Liu Z, Liu L, Pan J, et al. Gut microbiota as an objective measurement for auxiliary diagnosis of insomnia disorder. Front Microbiol. 2019 Aug; 10:1770. https://doi.org/10.3389/fmicb.2019.01770LiuBLinWChenSXiangTYangYYinYXuGLiuZLiuLPanJet alGut microbiota as an objective measurement for auxiliary diagnosis of insomnia disorder2019101770https://doi.org/10.3389/fmicb.2019.0177010.3389/fmicb.2019.01770670120531456757Search in Google Scholar
Liu Z, Wei ZY, Chen J, Chen K, Mao X, Liu Q, Sun Y, Zhang Z, Zhang Y, Dan Z, et al. Acute sleep-wake cycle shift results in community alteration of human gut microbiome. mSphere. 2020 Feb 12; 5(1):e00914-19. https://doi.org/10.1128/mSphere.00914-19LiuZWeiZYChenJChenKMaoXLiuQSunYZhangZZhangYDanZet alAcute sleep-wake cycle shift results in community alteration of human gut microbiome2020Feb 1251e0091419https://doi.org/10.1128/mSphere.00914-1910.1128/mSphere.00914-19702147232051239Search in Google Scholar
Lund HG, Reider BD, Whiting AB, Prichard JR. Sleep patterns and predictors of disturbed sleep in a large population of college students. J Adolesc Health. 2010 Feb;46(2):124–132. https://doi.org/10.1016/j.jadohealth.2009.06.016LundHGReiderBDWhitingABPrichardJRSleep patterns and predictors of disturbed sleep in a large population of college students2010462124132https://doi.org/10.1016/j.jadohealth.2009.06.01610.1016/j.jadohealth.2009.06.01620113918Search in Google Scholar
Magoč T, Salzberg SL. FLASH: fast length adjustment of short reads to improve genome assemblies. Bioinformatics. 2011 Nov 1; 27(21): 2957–2963. https://doi.org/10.1093/bioinformatics/btr507MagočTSalzbergSLFLASH: fast length adjustment of short reads to improve genome assemblies2011Nov 1272129572963https://doi.org/10.1093/bioinformatics/btr50710.1093/bioinformatics/btr507319857321903629Search in Google Scholar
Magzal F, Even C, Haimov I, Agmon M, Asraf K, Shochat T, Tamir S. Associations between fecal short-chain fatty acids and sleep continuity in older adults with insomnia symptoms. Sci Rep. 2021 Feb 18;11(1):4052. https://doi.org/10.1038/s41598-021-83389-5MagzalFEvenCHaimovIAgmonMAsrafKShochatTTamirSAssociations between fecal short-chain fatty acids and sleep continuity in older adults with insomnia symptoms2021Feb 181114052https://doi.org/10.1038/s41598-021-83389-510.1038/s41598-021-83389-5789316133603001Search in Google Scholar
Maki KA, Burke LA, Calik MW, Watanabe-Chailland M, Sweeney D, Romick-Rosendale LE, Green SJ, Fink AM. Sleep fragmentation increases blood pressure and is associated with alterations in the gut microbiome and fecal metabolome in rats. Physiol Genomics. 2020 Jul 1;52(7):280–292. https://doi.org/10.1152/physiolgenomics.00039.2020MakiKABurkeLACalikMWWatanabe-ChaillandMSweeneyDRomick-RosendaleLEGreenSJFinkAMSleep fragmentation increases blood pressure and is associated with alterations in the gut microbiome and fecal metabolome in rats2020Jul 1527280292https://doi.org/10.1152/physiolgenomics.00039.202010.1152/physiolgenomics.00039.2020746869232567509Search in Google Scholar
Mashaqi S, Gozal D. “Circadian misalignment and the gut microbiome. A bidirectional relationship triggering inflammation and metabolic disorders” – a literature review. Sleep Med. 2020 Aug; 72:93–108. https://doi.org/10.1016/j.sleep.2020.03.020MashaqiSGozalD.“Circadian misalignment and the gut microbiome. A bidirectional relationship triggering inflammation and metabolic disorders” – a literature review20207293108https://doi.org/10.1016/j.sleep.2020.03.02010.1016/j.sleep.2020.03.02032559717Search in Google Scholar
Nakakita Y, Tsuchimoto N, Takata Y, Nakamura T. Effect of dietary heat-killed Lactobacillus brevis SBC8803 (SBL88™) on sleep: a non-randomised, double blind, placebo-controlled, and crossover pilot study. Benef Microbes. 2016 Sep;7(4):501–509. https://doi.org/10.3920/BM2015.0118NakakitaYTsuchimotoNTakataYNakamuraTEffect of dietary heat-killed Lactobacillus brevis SBC8803 (SBL88™) on sleep: a non-randomised, double blind, placebo-controlled, and crossover pilot study201674501509https://doi.org/10.3920/BM2015.011810.3920/BM2015.011827013460Search in Google Scholar
Ogawa Y, Miyoshi C, Obana N, Yajima K, Hotta-Hirashima N, Ikkyu A, Kanno S, Soga T, Fukuda S, Yanagisawa M. Gut microbiota depletion by chronic antibiotic treatment alters the sleep/wake architecture and sleep EEG power spectra in mice. Sci Rep. 2020 Nov 11;10(1):19554. https://doi.org/10.1038/s41598-020-76562-9OgawaYMiyoshiCObanaNYajimaKHotta-HirashimaNIkkyuAKannoSSogaTFukudaSYanagisawaMGut microbiota depletion by chronic antibiotic treatment alters the sleep/wake architecture and sleep EEG power spectra in mice2020Nov 1110119554https://doi.org/10.1038/s41598-020-76562-910.1038/s41598-020-76562-9765934233177599Search in Google Scholar
Ohayon MM, Roberts RE, Zulley J, Smirne S, Priest RG. Prevalence and patterns of problematic sleep among older adolescents. J Am Acad Child Adolesc Psychiatry. 2000 Dec;39(12):1549–1556. https://doi.org/10.1097/00004583-200012000-00019OhayonMMRobertsREZulleyJSmirneSPriestRGPrevalence and patterns of problematic sleep among older adolescents2000391215491556https://doi.org/10.1097/00004583-200012000-0001910.1097/00004583-200012000-0001911128333Search in Google Scholar
Parkar SG, Kalsbeek A, Cheeseman JF. Potential role for the gut microbiota in modulating host circadian rhythms and metabolic health. Microorganisms. 2019 Jan 31;7(2):41. https://doi.org/10.3390/microorganisms7020041ParkarSGKalsbeekACheesemanJFPotential role for the gut microbiota in modulating host circadian rhythms and metabolic health2019Jan 317241https://doi.org/10.3390/microorganisms702004110.3390/microorganisms7020041640661530709031Search in Google Scholar
Poroyko VA, Carreras A, Khalyfa A, Khalyfa AA, Leone V, Peris E, Almendros I, Gileles-Hillel A, Qiao Z, Hubert N, et al. Chronic sleep disruption alters gut microbiota, induces systemic and adipose tissue inflammation and insulin resistance in mice. Sci Rep. 2016 Oct 14;6:35405. https://doi.org/10.1038/srep35405PoroykoVACarrerasAKhalyfaAKhalyfaAALeoneVPerisEAlmendrosIGileles-HillelAQiaoZHubertNet alChronic sleep disruption alters gut microbiota, induces systemic and adipose tissue inflammation and insulin resistance in mice2016Oct 14635405https://doi.org/10.1038/srep3540510.1038/srep35405506436127739530Search in Google Scholar
Reutrakul S, So-ngern A, Chirakalwasan N, Saetung S, Chanprasertyothin S, Thakkinstian A, Chlipala GE. No changes in gut microbiota after two-week sleep extension in chronically sleep-deprived individuals. Sleep Med. 2020 Apr;68:27–30. https://doi.org/10.1016/j.sleep.2019.08.022ReutrakulSSo-ngernAChirakalwasanNSaetungSChanprasertyothinSThakkinstianAChlipalaGENo changes in gut microbiota after two-week sleep extension in chronically sleep-deprived individuals2020682730https://doi.org/10.1016/j.sleep.2019.08.02210.1016/j.sleep.2019.08.022706763132018189Search in Google Scholar
Szentirmai É, Millican NS, Massie AR, Kapás L. Butyrate, a metabolite of intestinal bacteria, enhances sleep. Sci Rep. 2019 May 7; 9(1): 7035. https://doi.org/10.1038/s41598-019-43502-1Szentirmai ÉMillican NSMassieARKapásLButyrate, a metabolite of intestinal bacteria, enhances sleep2019May 7917035https://doi.org/10.1038/s41598-019-43502-110.1038/s41598-019-43502-1650487431065013Search in Google Scholar
Thompson RS, Roller R, Mika A, Greenwood BN, Knight R, Chichlowski M, Berg BM, Fleshner M. Dietary prebiotics and bioactive milk fractions improve NREM sleep, enhance REM sleep rebound and attenuate the stress-induced decrease in diurnal temperature and gut microbial alpha diversity. Front Behav Neurosci. 2017 Jan 10;10:240. https://doi.org/10.3389/fnbeh.2016.00240ThompsonRSRollerRMikaAGreenwoodBNKnightRChichlowskiMBergBMFleshnerMDietary prebiotics and bioactive milk fractions improve NREM sleep, enhance REM sleep rebound and attenuate the stress-induced decrease in diurnal temperature and gut microbial alpha diversity2017Jan 1010240https://doi.org/10.3389/fnbeh.2016.0024010.3389/fnbeh.2016.00240522348528119579Search in Google Scholar
Voigt RM, Forsyth CB, Green SJ, Mutlu E, Engen P, Vitaterna MH, Turek FW, Keshavarzian A. Circadian disorganization alters intestinal microbiota. PLoS One. 2014 May 21;9(5):e97500. https://doi.org/10.1371/journal.pone.0097500VoigtRMForsythCBGreenSJMutluEEngenPVitaternaMHTurekFWKeshavarzianACircadian disorganization alters intestinal microbiota2014May 2195e97500https://doi.org/10.1371/journal.pone.009750010.1371/journal.pone.0097500402976024848969Search in Google Scholar
Weiss S, Xu ZZ, Peddada S, Amir A, Bittinger K, Gonzalez A, Lozupone C, Zaneveld JR, Vázquez-Baeza Y, Birmingham A, et al. Normalization and microbial differential abundance strategies depend upon data characteristics. Microbiome. 2017 Mar 3;5(1):27. https://doi.org/10.1186/s40168-017-0237-yWeissSXuZZPeddadaSAmirABittingerKGonzalezALozuponeCZaneveldJRVázquez-BaezaYBirminghamAet alNormalization and microbial differential abundance strategies depend upon data characteristics2017Mar 35127https://doi.org/10.1186/s40168-017-0237-y10.1186/s40168-017-0237-y533549628253908Search in Google Scholar
Withrow D, Bowers SJ, Depner CM, González A, Reynolds AC, Wright KP Jr. Sleep and circadian disruption and the gut microbiome-possible links to dysregulated metabolism. Curr Opin Endocr Metab Res. 2021 Apr;17:26–37. https://doi.org/10.1016/j.coemr.2020.11.009WithrowDBowersSJDepnerCMGonzálezAReynoldsACWrightKP JrSleep and circadian disruption and the gut microbiome-possible links to dysregulated metabolism2021172637https://doi.org/10.1016/j.coemr.2020.11.00910.1016/j.coemr.2020.11.009859797834805616Search in Google Scholar
Withrow D, Gonzalez A, Sprecher K, Depner C, Burke T, Fleshner M, Lowry C, Turek F, Vitaterna M, Dorrestein P, et al. Stability of gut microbiome alpha diversity during combined sleep restriction and circadian misalignment. Sleep. 2021 May; 44(Suppl_2): A46–A47. https://doi.org/10.1093/sleep/zsab072.113WithrowDGonzalezASprecherKDepnerCBurkeTFleshnerMLowryCTurekFVitaternaMDorresteinPet alStability of gut microbiome alpha diversity during combined sleep restriction and circadian misalignment202144Suppl_2A46A47https://doi.org/10.1093/sleep/zsab072.11310.1093/sleep/zsab072.113Search in Google Scholar
Yang T, Peng S, Barnett R, Zhang C. Regional contextual influences on short sleep duration: a 50 universities population-based multilevel study in China. Glob Health Action. 2018;11(1):1442684. https://doi.org/10.1080/16549716.2018.1442684YangTPengSBarnettRZhangCRegional contextual influences on short sleep duration: a 50 universities population-based multilevel study in China20181111442684https://doi.org/10.1080/16549716.2018.144268410.1080/16549716.2018.1442684584402429495949Search in Google Scholar
Zhang SL, Bai L, Goel N, Bailey A, Jang CJ, Bushman FD, Meerlo P, Dinges DF, Sehgal A. Human and rat gut microbiome composition is maintained following sleep restriction. Proc Natl Acad Sci USA. 2017 Feb 21;114(8):E1564–E1571. https://doi.org/10.1073/pnas.1620673114ZhangSLBaiLGoelNBaileyAJangCJBushmanFDMeerloPDingesDFSehgalAHuman and rat gut microbiome composition is maintained following sleep restriction2017Feb 211148E1564E1571https://doi.org/10.1073/pnas.162067311410.1073/pnas.1620673114533841828179566Search in Google Scholar