Uneingeschränkter Zugang

Comparative analysis of sweet cherry (P. avium) genetic diversity revealed by two methods of SSR marker detection


Zitieren

Ahmad, R., Potter, D., Southwick, S. M. (2004). Identification and characterization of plum and plumcot cultivars by microsatellite markers. J. Hort. Sci. Biotechnol., 79, 164-169.10.1080/14620316.2004.11511743Search in Google Scholar

Aranzana, M. J., Cosson, P., Dirlewanger, E., Ascasibar, J., Cipriani, G., Arús, P., Testolin, R., Abbott, A., King, G. J., Iezzoni, A. F. (2003). A set of simplesequence repeat (SSR) markers covering the Prunus genome. Theor. Appl. Genet., 106, 819-825.10.1007/s00122-002-1094-y12647055Search in Google Scholar

Baránek, M., Raddová, J., Pidra, M. (2006). Comparative analysis of genetic diversity in Prunus L. as revealed by RAPD and SSR markers. Scientia Hort., 108, 253-259.10.1016/j.scienta.2006.01.023Search in Google Scholar

Beaver, J. A., Iezzoni, A. F., Ramm, C. W. (1995). Isozyme diversity in sour, sweet, and ground cherry. Theor. Appl. Genet., 90(6), 847-852.10.1007/BF0022202124172928Search in Google Scholar

Bianchi, V. J., Sansavini S., Fachinello J. C. (2004). Microsatellite markers for identification of Prunus spp. rootstocks. Scientia Agricola, 61(3), 303-306.10.1590/S0103-90162004000300011Search in Google Scholar

Callen, D. F., Thompson, A. D., Shen, Y., Phillips, H. A., Richards, R. I., Mulley, J. C., Sutherland, G. R. (1993). Incidence and origin of "null" alleles in the (AC)n microsatellite markers. Amer. J. Hum. Genet., 52, 922-927.Search in Google Scholar

Cantini, C., Iezzoni, A. F., Lamboy, W. F., Boritzki, M., Struss, D. (2001). DNA fingerprinting of tetraploid cherry germplasm using simple sequence repeats. J. Amer. Soc. Hort. Sci., 126, 205-209.10.21273/JASHS.126.2.205Search in Google Scholar

Dirlewanger, E., Cosson, P., Tavaud, M., Aranzana, M. J., Poizat, C., Zanetto, A., Arśs, P., Laigret, F. (2002). Development of microsatellite markers in peach [Prunus persica (L.) Batsch] and their use in genetic diversity analysis in peach and sweet cherry (Prunus avium L.). Theor. Appl. Genet., 105, 127-138.10.1007/s00122-002-0867-712582570Search in Google Scholar

Excoffier, L. Laval, G., Schneider, S. (2005). Arlequin ver. 3.0: An integrated software package for population genetics data analysis. Evolutionary Bioinformatics Online, 1, 47-50.Search in Google Scholar

Gerlach, H. K., Stosser, R., Ystaas, J. (1997). Sweet cherry cultivar identification using RAPD-derived DNA fingerprints. Acta Hort., 468, 63-69.Search in Google Scholar

Goulćo, L., Monte-Corvo, L., Oliveira, C. M. (2001). Phenetic characterization of plum cultivars by high multiplex ratio markers: Amplified fragment length polymorphisms and inter-simple sequence repeats. J. Amer. Soc. Hort. Sci., 126(1), 72-77.10.21273/JASHS.126.1.72Search in Google Scholar

Granger, A. R. (1996). Inheritance and linkage of isozymes in sweet cherry (Prunus avium L.). Theor. Appl. Genet., 93(3), 426-430.10.1007/BF0022318624162301Search in Google Scholar

Hampl, V., Pavlicek, A., Flegr, J. (2001). Construction and bootstrap analysis of DNA fingerprinting-based phylogenetic trees with a freeware program FreeTree: Application to trichomonad parasites. Int. J. Syst. Evol. Microbiol., 51, 731-735.10.1099/00207713-51-3-73111411692Search in Google Scholar

Höltken, A. M., Gregorius, H. R. (2006). Detecting local establishment strategies of wild cherry (Prunus avium L.). BMC Ecology, 6, 13. DOI: 10.1186/1472-6785-6-13.10.1186/1472-6785-6-13160909917020607Search in Google Scholar

Kacar, Y. A., Iezzoni, A., Cetiner, S. (2005). Sweet cherry cultivar identification by using SSR markers. J. Biol. Sci., 5(5), 616-619.10.3923/jbs.2005.616.619Search in Google Scholar

Lacis, G., Kaufmane, E., Rashal, I., Trajkovski, V., Iezzoni, A. F. (2008). Identification of self-incompatibility (S) alleles in Latvian and Swedish sweet cherry genetic resources collections by PCR based typing. Euphytica, 160, 155-163.10.1007/s10681-007-9496-1Search in Google Scholar

Lacis, G., Kaufmane, E., Trajkovski, V. & Rashal I. (2009a). Morphological variability and genetic diversity within Latvian and Swedish sweet cherry collections. Acta Univ. Latviensis, 753, 19-32.Search in Google Scholar

Lacis, G., Rashal, I., Ruisa, S., Trajkovski, V., Iezzoni, A. F. (2009b). Assessment of genetic diversity of Latvian and Swedish sweet cherry (Prunus avium L.) genetic resources collections by using SSR (microsatellite) markers. Scientia Hort., 121, 451-457.10.1016/j.scienta.2009.03.016Search in Google Scholar

Lamboy, W. F., Alpha, C. G. (1998). Using simple sequence repeats (SSRs) for fingerprinting germplasm accessions of grape (Vitis L.) species, J. Amer. Soc. Hortic. Sci., 123, 182-188.10.21273/JASHS.123.2.182Search in Google Scholar

Nei, M., Li, W. H. (1979). Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc. Natl. Acad. Sci. U. S. A., 76, 3269-3273.10.1073/pnas.76.10.5269413122291943Search in Google Scholar

Nybom, H., Schaal, B. A. (1990). DNA ‘fingerprints’ reveal genotypic distributions in natural populations of blackberries and raspberries (Rubus, Rosaceae). Amer. J. Botany, 44, 883-888.10.1002/j.1537-2197.1990.tb15183.xSearch in Google Scholar

Ohta, S., Katsuki, T., Tanaka, T., Hayashi, T., Sato, Y. I., Yamamoto, T. (2005). Genetic variation in flowering cherries (Prunus subgenus Cerasus) characterized by SSR markers. Breeding Sci., 55, 415-424.10.1270/jsbbs.55.415Search in Google Scholar

Panda, S., Martín, J. P. & Aguinagalde, I. (2003). Chloroplast DNA study in sweet cherry cultivars (Prunus avium L.) using PCR-RFLP method. Gen. Res. Crop Evol., 50, 489-495.10.1023/A:1023986416037Search in Google Scholar

Peakall, R., Smouse, P. E. (2006). GENALEX 6: Genetic analysis in Excel. Population genetic software for teaching and research. Mol. Ecology Notes, 6, 288-295.10.1111/j.1471-8286.2005.01155.xSearch in Google Scholar

Pedersen, B. H. (2006). DNA fingerprints of 51 sweet and sour Prunus accessions using Simple Sequence Repeats. J. Hort. Sci. Biotechnol., 81(1), 118-124.10.1080/14620316.2006.11512037Search in Google Scholar

Ricciardi, L., Giorgio, V., de Giovanni, C., Lotti, C., Gallotta, A., Fanizza, G. (2002). The genetic diversity of Apulian apricot genotypes (Prunus armeniaca L.) assessed using AFLP markers. Cell. Mol. Biol. Lett., 7, 431-436.Search in Google Scholar

Ruisa, S. (1998). Genetic resources of Latvian sweet cherries and their use. Acta Hort., 468, 153-160.10.17660/ActaHortic.1998.468.17Search in Google Scholar

Sánchez-Pérez, R., Ruiz, D., Dicenta, F., Egea, J., Martínez-Gómez, P. (2005). Application of simple sequence repeat (SSR) markers in apricot breeding: Molecular characterization, protection, and genetic relationships. Scientia Hort., 103, 305-315.10.1016/j.scienta.2004.06.009Search in Google Scholar

Sánchez-Pérez, R., Ballester, J., Dicenta, F., Arús, P., Martínez-Gómez, P. (2006). Comparison of SSR polymrphisms using automated capillary sequencers, and polyacrylamide and agarose gel electrophoresis: Implications for the assessment of genetic diversity and relatedness in almond. Scientia Hort., 108(3), 310-316.10.1016/j.scienta.2006.02.004Search in Google Scholar

Schueler, S., Tusch, A., Schuster, M., Ziegenhangen, B. (2003). Characterization of microsatellites in wild and sweet cherry (Prunus avium L.) — markers for individual identification and reproductive processes. Genome, 46, 95-102.10.1139/g02-10712669801Search in Google Scholar

Stockinger, E. J., Mulinix, C. A., Long, C. M., Brettin, T. S., Iezzony, A. F. (1996). A linkage map of sweet cherry based on RAPD analysis of a microspore-derived callus culture population. J. Heredity, 37, 214-218.10.1093/oxfordjournals.jhered.a0229878683097Search in Google Scholar

Tamura, K., Dudley, J., Nei, M., Kumar, S. (2007). MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24, 1596-1599.10.1093/molbev/msm09217488738Search in Google Scholar

Trajkovski, V. (1996). A review of the cherry breeding program in Sweden. Acta Hort., 410, 387-388.10.17660/ActaHortic.1996.410.61Search in Google Scholar

Vaughan, S. P., Russell, K. (2004). Characterization of novel microsatellites and development of multiplex PCR for large-scale population studies in wild cherry, Prunus avium. Mol. Ecology Notes, 4, 429-431.10.1111/j.1471-8286.2004.00673.xSearch in Google Scholar

Wünsch, A., Hormaza, J. I. (2002a). Molecular characterisation of sweet cherry (Prunus avium L.) genotypes using peach [Prunus persica (L.) Batsch] SSR sequences. Heredity, 89, 56-63.10.1038/sj.hdy.680010112080370Search in Google Scholar

Wünsch, A., Hormaza, J. I. (2002b). Cultivar identification and genetic fingerprinting of temperate fruit tree species using DNA markers. Euphytica, 125, 56-67.10.1023/A:1015723805293Search in Google Scholar

Wünsch, A., Hormaza, J. I. (2004). Molecular evaluation of genetic diversity and S-allele composition of local Spanish sweet cherry (Prunus avium L.) cultivars. Gen. Res. Crop Evol., 51, 635-641.10.1023/B:GRES.0000024649.06681.43Search in Google Scholar

ISSN:
1407-009X
Sprache:
Englisch
Zeitrahmen der Veröffentlichung:
6 Hefte pro Jahr
Fachgebiete der Zeitschrift:
Allgemein, Mathematik, Allgemeines