This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.
Alexander L.K., Small J.D., Edwards S., Baric R.S.: An experimental model for dilated cardiomyopathy after rabbit coronavirus infection. J Infect Dis 1992, 166, 978–985.AlexanderL.K.SmallJ.D.EdwardsS.BaricR.S.An experimental model for dilated cardiomyopathy after rabbit coronavirus infection199216697898510.1093/infdis/166.5.97871099311328411Search in Google Scholar
Almeida J.D., Tyrrell D.A.: The morphology of three previously uncharacterized human respiratory viruses that grow in organ culture. J Gen Virol 1967, 1, 175–178.AlmeidaJ.D.TyrrellD.A.The morphology of three previously uncharacterized human respiratory viruses that grow in organ culture1967117517810.1099/0022-1317-1-2-1754293939Search in Google Scholar
Almendros A.: Can companion animals become infected with Covid-19? Vet Rec 2020, 186, 419–420.AlmendrosA.Can companion animals become infected with Covid-19?202018641942010.1136/vr.m132232245870Search in Google Scholar
Andersen K.G., Rambaut A., Lipkin W.I., Holmes E.C., Garry R.F.: The proximal origin of SARS-CoV-2. Nat Med 2020, 26, 450–452.AndersenK.G.RambautA.LipkinW.I.HolmesE.C.GarryR.F.The proximal origin of SARS-CoV-220202645045210.1038/s41591-020-0820-9709506332284615Search in Google Scholar
Ballesteros M.L., Sánchez C.M., Enjuanes L.: Two amino acid changes at the N-terminus of transmissible gastroenteritis coronavirus spike protein result in the loss of enteric tropism. Virology 1997, 227, 378–388.BallesterosM.L.SánchezC.M.EnjuanesL.Two amino acid changes at the N-terminus of transmissible gastroenteritis coronavirus spike protein result in the loss of enteric tropism199722737838810.1006/viro.1996.834471309699018137Search in Google Scholar
Bank T.W.: The World Livestock Disease Atlas. A quantitative analysis of global animal health data. 2011, Washington, USA: The World Bank.BankT.W.2011Washington, USAThe World BankSearch in Google Scholar
Belsham G.J., Rasmussen T.B., Normann P., Vaclavek P., Strandbygaard B., Botner A.: Characterization of a novel chimeric swine enteric coronavirus from diseased pigs in Central Eastern Europe in 2016. Transbound Emerg Dis 2016, 63, 595–601.BelshamG.J.RasmussenT.B.NormannP.VaclavekP.StrandbygaardB.BotnerA.Characterization of a novel chimeric swine enteric coronavirus from diseased pigs in Central Eastern Europe in 201620166359560110.1111/tbed.12579716987427619563Search in Google Scholar
Beltz L.A., Bats and coronaviruses, in: Bats and Human Health John Wiley & Sons, New York, 2018. pp. 111–138.BeltzL.A.Bats and coronavirusesinJohn Wiley & Sons, New York201811113810.1002/9781119150060.ch5Search in Google Scholar
Bermingham A., Chand M.A., Brown C.S., Aarons E., Tong C., Langrish C., Hoschler K., Brown K., Galiano M., Myers R., Pebody R.G., Green H.K., Boddington N.L., Gopal R., Price N., Newsholme W., Drosten C., Fouchier R.A., Zambon M.: Severe respiratory illness caused by a novel coronavirus, in a patient transferred to the United Kingdom from the Middle East, September 2012. Euro Surv 2012, 17, 20290.BerminghamA.ChandM.A.BrownC.S.AaronsE.TongC.LangrishC.HoschlerK.BrownK.GalianoM.MyersR.PebodyR.G.GreenH.K.BoddingtonN.L.GopalR.PriceN.NewsholmeW.DrostenC.FouchierR.A.ZambonM.Severe respiratory illness caused by a novel coronavirus, in a patient transferred to the United Kingdom from the Middle East, September 20122012172029010.2807/ese.17.40.20290-enSearch in Google Scholar
Bidokhti M.R.M., Tråvén M., Krishna N.K., Munir M., Belák S., Alenius S., Cortey M.: Evolutionary dynamics of bovine coronaviruses: natural selection pattern of the spike gene implies adaptive evolution of the strains. J Gen Virol 2013, 94, 2036–2049.BidokhtiM.R.M.TråvénM.KrishnaN.K.MunirM.BelákS.AleniusS.CorteyM.Evolutionary dynamics of bovine coronaviruses: natural selection pattern of the spike gene implies adaptive evolution of the strains2013942036204910.1099/vir.0.054940-023804565Search in Google Scholar
Boni M.F., Lemey P., Jiang X., Lam T.T.-Y., Perry B., Castoe T., Rambaut A., Robertson D.L.: Evolutionary origins of the SARS-CoV-2 sarbecovirus lineage responsible for the COVID-19 pandemic. bioRxiv 2020, doi: 10/1101/2020.03.30.015008.BoniM.F.LemeyP.JiangX.LamT.T.-Y.PerryB.CastoeT.RambautA.RobertsonD.L.Evolutionary origins of the SARS-CoV-2 sarbecovirus lineage responsible for the COVID-19 pandemic202010/1101/2020.03.30.015008Open DOISearch in Google Scholar
Borucki M.K., Allen J.E., Chen-Harris H., Zemla A., Vanier G., Mabery S., Torres C., Hullinger P., Slezak T.: The role of viral population diversity in adaptation of bovine coronavirus to new host environments. PLoS One 2013, 8, e52752.BoruckiM.K.AllenJ.E.Chen-HarrisH.ZemlaA.VanierG.MaberyS.TorresC.HullingerP.SlezakT.The role of viral population diversity in adaptation of bovine coronavirus to new host environments20138e5275210.1371/journal.pone.0052752353875723308119Search in Google Scholar
Bouwman K.M., Delpont M., Broszeit F., Berger R., Weerts E.A.W.S., Lucas M.-N., Delverdier M., Belkasmi S., Papanikolaou A., Boons G.-J., Guérin J.-L., de Vries R.P., Ducatez M.F., Verheije M.H.: Guinea fowl coronavirus diversity has phenotypic consequences for glycan and tissue binding. J Virol 2019, 93, e00067-00019.BouwmanK.M.DelpontM.BroszeitF.BergerR.WeertsE.A.W.S.LucasM.-N.DelverdierM.BelkasmiS.PapanikolaouA.BoonsG.-J.GuérinJ.-L.de VriesR.P.DucatezM.F.VerheijeM.H.Guinea fowl coronavirus diversity has phenotypic consequences for glycan and tissue binding201993e000670001910.1128/JVI.00067-19649803730842318Search in Google Scholar
Brown P.A., Touzain F., Briand F.X., Gouilh A.M., Courtillon C., Allee C., Lemaitre E., De Boisseson C., Blanchard Y., Eterradossi N.: First complete genome sequence of European turkey coronavirus suggests complex recombination history related with US turkey and guinea fowl coronaviruses. J Gen Virol 2016, 97, 110–120.BrownP.A.TouzainF.BriandF.X.GouilhA.M.CourtillonC.AlleeC.LemaitreE.De BoissesonC.BlanchardY.EterradossiN.First complete genome sequence of European turkey coronavirus suggests complex recombination history related with US turkey and guinea fowl coronaviruses20169711012010.1099/jgv.0.000338708107426585962Search in Google Scholar
Buonavoglia C., Decaro N., Martella V., Elia G., Campolo M., Desario C., Castagnaro M., Tempesta M.: Canine coronavirus highly pathogenic for dogs. Emerg Infect Dis 2006, 12, 492–494.BuonavogliaC.DecaroN.MartellaV.EliaG.CampoloM.DesarioC.CastagnaroM.TempestaM.Canine coronavirus highly pathogenic for dogs20061249249410.3201/eid1203.050839329144116704791Search in Google Scholar
Cerioli M., Lavazza A.: 3.6. Viral enteritis of rabbits. In: Recent Advances in Rabbit Sciences edited by L. Maertens and P. Coudert, Institute for Agricultural and Fisheries Research (ILVO), Animal Science Unit, Melle, 2006, pp 181–186.CerioliM.LavazzaA.3.6. Viral enteritis of rabbitsedited byMaertensL.andCoudertP.Animal Science UnitMelle2006181186Search in Google Scholar
Changhee L.: Porcine epidemic diarrhea virus: An emerging and re-emerging epizootic swine virus. Virol J 2015, 12, 193.ChangheeL.Porcine epidemic diarrhea virus: An emerging and re-emerging epizootic swine virus20151219310.1186/s12985-015-0421-2468728226689811Search in Google Scholar
Cheever F.S., Daniels J.B., Pappenheimer A.M., Bailey O.T.: A murine virus (JHM) causing disseminated encephalomyelitis with extensive destruction of myelin. I. isolation and biological properties of the virus. J Exp Med 1949, 90, 181–194.CheeverF.S.DanielsJ.B.PappenheimerA.M.BaileyO.T.A murine virus (JHM) causing disseminated encephalomyelitis with extensive destruction of myelin19499018119410.1084/jem.90.3.181213590518137294Search in Google Scholar
Chen Q., Gauger P.C., Stafne M.R., Thomas J.T., Madson D.M., Huang H., Zheng Y., Li G., Zhang J.: Pathogenesis comparison between the United States porcine epidemic diarrhoea virus prototype and S-INDEL-variant strains in conventional neonatal piglets. J Gen Virol 2016, 97, 1107–1121.ChenQ.GaugerP.C.StafneM.R.ThomasJ.T.MadsonD.M.HuangH.ZhengY.LiG.ZhangJ.Pathogenesis comparison between the United States porcine epidemic diarrhoea virus prototype and S-INDEL-variant strains in conventional neonatal piglets2016971107112110.1099/jgv.0.00041926841768Search in Google Scholar
Chu D.K., Leung C.Y., Gilbert M., Joyner P.H., Ng E.M., Tse T.M., Guan Y., Peiris J.S., Poon L.L.: Avian coronavirus in wild aquatic birds. J Virol 2011, 85, 12815–12820.ChuD.K.LeungC.Y.GilbertM.JoynerP.H.NgE.M.TseT.M.GuanY.PeirisJ.S.PoonL.L.Avian coronavirus in wild aquatic birds201185128151282010.1128/JVI.05838-11320936521957308Search in Google Scholar
Cook J.K.A., Jackwood M., Jones R.C.: The long view: 40 years of infectious bronchitis research. Avian Path 2012, 41, 239–250.CookJ.K.A.JackwoodM.JonesR.C.The long view: 40 years of infectious bronchitis research20124123925010.1080/03079457.2012.68043222702451Search in Google Scholar
Corman V.M., Kallies R., Philipps H., Göpner G., Müller M.A., Eckerle I., Brünink S., Drosten C., Drexler J.F.: Characterization of a novel betacoronavirus related to Middle East respiratory syndrome coronavirus in European hedgehogs. J Virol 2014, 88, 717–724, doi: 10.1128/JVI.01600-13.CormanV.M.KalliesR.PhilippsH.GöpnerG.MüllerM.A.EckerleI.BrüninkS.DrostenC.DrexlerJ.F.Characterization of a novel betacoronavirus related to Middle East respiratory syndrome coronavirus in European hedgehogs20148871772410.1128/JVI.01600-13391173424131722Open DOISearch in Google Scholar
Corman V.M., Muth D., Niemeyer D., Drosten C.: Chapter eight - hosts and sources of endemic human coronaviruses. In: Advances in Virus Research edited by M. Kielian, T.C. Mettenleiter, and M.J. Roossinck, Academic Press, Waltham, pp. 163–188.CormanV.M.MuthD.NiemeyerD.DrostenC.Chapter eight - hosts and sources of endemic human coronavirusesedited byKielianM.MettenleiterT.C.andRoossinckM.J.Academic PressWaltham16318810.1016/bs.aivir.2018.01.001Search in Google Scholar
Cui J., Li F., Shi Z.-L.: Origin and evolution of pathogenic coronaviruses. Nat Rev Microbiol 2019, 17, 181–192.CuiJ.LiF.ShiZ.-L.Origin and evolution of pathogenic coronaviruses20191718119210.1038/s41579-018-0118-9Search in Google Scholar
de Groot R.J., Horzinek M.J.: Feline infectious peritonitis. In: The Coronaviridae edited by S.C. Siddell, Plenum, New York, 1995, pp. 293–309.deGroot R.J.HorzinekM.J.Feline infectious peritonitisedited bySiddellS.C.PlenumNew York1995293309Search in Google Scholar
de Groot R.J., Ziebuhr J., Poon L.L., Woo P.C., Talbot P., Rottier P.J.M.: Revision of the family Coronaviridae. Taxonomic proposal of the Coronavirus Study Group to the ICTV Executive Committee. 2008. http://talk.ictvonline.org/media/p/1230.aspxdeGroot R.J.ZiebuhrJ.PoonL.L.WooP.C.TalbotP.RottierP.J.M.Revision of the family Coronaviridae2008http://talk.ictvonline.org/media/p/1230.aspxSearch in Google Scholar
de Wit J.J., Cook J.K.A., van der Heijden H.M.J.F.: Infectious bronchitis virus variants: a review of the history, current situation and control measures. Avian Path 2011, 40, 223–235.deWit J.J.CookJ.K.A.vander Heijden H.M.J.F.Infectious bronchitis virus variants: a review of the history, current situation and control measures20114022323510.1080/03079457.2011.566260Search in Google Scholar
Decaro N., Lorusso A.: Novel human coronavirus (SARS-CoV-2): A lesson from animal coronaviruses. Vet Microbiol 2020, 244, 108693.DecaroN.LorussoA.Novel human coronavirus (SARS-CoV-2): A lesson from animal coronaviruses202024410869310.1016/j.vetmic.2020.108693Search in Google Scholar
Drexler J.F., Corman V.M., Drosten C.: Ecology, evolution and classification of bat coronaviruses in the aftermath of SARS. Antiviral Res 2014, 101, 45–56.DrexlerJ.F.CormanV.M.DrostenC.Ecology, evolution and classification of bat coronaviruses in the aftermath of SARS2014101455610.1016/j.antiviral.2013.10.013Search in Google Scholar
Ellis J.: What is the evidence that bovine coronavirus is a biologically significant respiratory pathogen in cattle? Can Vet J 2019, 60, 147–152.EllisJ.What is the evidence that bovine coronavirus is a biologically significant respiratory pathogen in cattle?201960147152Search in Google Scholar
Ellis J.A., McLean N., Hupaelo R., Haines D.M.: Detection of coronavirus in cases of tracheobronchitis in dogs: a retrospective study from 1971 to 2003. Can Vet J 2005, 46, 447–448.EllisJ.A.McLeanN.HupaeloR.HainesD.M.Detection of coronavirus in cases of tracheobronchitis in dogs: a retrospective study from 1971 to 2003200546447448Search in Google Scholar
Erles K., Brownlie J.: Investigation into the causes of canine infectious respiratory disease: antibody responses to canine respiratory coronavirus and canine herpesvirus in two kennelled dog populations. Arch Virol 2005, 150, 1493–1504.ErlesK.BrownlieJ.Investigation into the causes of canine infectious respiratory disease: antibody responses to canine respiratory coronavirus and canine herpesvirus in two kennelled dog populations20051501493150410.1007/s00705-005-0533-xSearch in Google Scholar
Erles K., Shiu K.B., Brownlie J.: Isolation and sequence analysis of canine respiratory coronavirus. Virus Res 2007, 124, 78–87.ErlesK.ShiuK.B.BrownlieJ.Isolation and sequence analysis of canine respiratory coronavirus2007124788710.1016/j.virusres.2006.10.004Search in Google Scholar
Erles K., Toomey C., Brooks H.W., Brownlie J.: Detection of a group 2 coronavirus in dogs with canine infectious respiratory disease. Virology 2003, 310, 216–223.ErlesK.ToomeyC.BrooksH.W.BrownlieJ.Detection of a group 2 coronavirus in dogs with canine infectious respiratory disease200331021622310.1016/S0042-6822(03)00160-0Search in Google Scholar
Fehr A.R., Perlman S.: Coronaviruses: an overview of their replication and pathogenesis. Methods Mol Biol 2015, 1282, 1–23.FehrA.R.PerlmanS.Coronaviruses: an overview of their replication and pathogenesis2015128212310.1007/978-1-4939-2438-7_1436938525720466Search in Google Scholar
Foley J.E., Poland A., Carlson J., Pedersen N.C.: Patterns of feline coronavirus infection and fecal shedding from cats in multiple-cat environments. J Am Vet Med Ass 1997, 210, 1307–1312.FoleyJ.E.PolandA.CarlsonJ.PedersenN.C.Patterns of feline coronavirus infection and fecal shedding from cats in multiple-cat environments199721013071312Search in Google Scholar
Forni D., Cagliani R., Clerici M., Sironi M.: Molecular evolution of human coronavirus genomes. Trends Microbiol 2017, 25, 35–48.ForniD.CaglianiR.ClericiM.SironiM.Molecular evolution of human coronavirus genomes201725354810.1016/j.tim.2016.09.001711121827743750Search in Google Scholar
Ge X.-Y., Li J.-L., Yang X.-L., Chmura A.A., Zhu G., Epstein J.H., Mazet J.K., Hu B., Zhang W., Peng C., Zhang Y.-J., Luo C.-M., Tan B., Wang N., Zhu Y., Crameri G., Zhang S.-Y., Wang L.-F., Daszak P., Shi Z.-L.: Isolation and characterization of a bat SARS-like coronavirus that uses the ACE2 receptor. Nature 2013, 503, 535–538.GeX.-Y.LiJ.-L.YangX.-L.ChmuraA.A.ZhuG.EpsteinJ.H.MazetJ.K.HuB.ZhangW.PengC.ZhangY.-J.LuoC.-M.TanB.WangN.ZhuY.CrameriG.ZhangS.-Y.WangL.-F.DaszakP.ShiZ.-L.Isolation and characterization of a bat SARS-like coronavirus that uses the ACE2 receptor201350353553810.1038/nature12711538986424172901Search in Google Scholar
Gélinas A.M., Sasseville A.J., Dea S.: Identification of specific variations within the HE, S1, and ORF4 genes of bovine coronaviruses associated with enteric and respiratory diseases in dairy cattle. In: The Nidoviruses edited by S. Perlman, K.V. Holmes, Springer, Boston, 2001, pp. 63–67.GélinasA.M.SassevilleA.J.DeaS.Identification of specific variations within the HE, S1, and ORF4 genes of bovine coronaviruses associated with enteric and respiratory diseases in dairy cattleedited byPerlmanS.HolmesK.V.SpringerBoston2001636710.1007/978-1-4615-1325-4_911774537Search in Google Scholar
Halfmann P.J., Hatta M., Chiba S., Maemura T., Fan S., Takeda M., Kinoshita N., Hattori S., Sakai-Tagawa Y., Iwatsuki-Horimoto K., Imai M., Kawaoka Y.: Transmission of SARS-CoV-2 in domestic cats. New Eng J Med 2020, doi: 10.1056/NEJMc2013400.HalfmannP.J.HattaM.ChibaS.MaemuraT.FanS.TakedaM.KinoshitaN.HattoriS.Sakai-TagawaY.Iwatsuki-HorimotoK.ImaiM.KawaokaY.Transmission of SARS-CoV-2 in domestic cats202010.1056/NEJMc201340032402157Open DOISearch in Google Scholar
Hepojoki S., Lindh E., Vapalahti O., Huovilainen A.: Prevalence and genetic diversity of coronaviruses in wild birds, Finland. Infect Ecol Epidemiol 2017, 7, 1408360, doi: 10.1080/20008686.2017.1408360.HepojokiS.LindhE.VapalahtiO.HuovilainenA.Prevalence and genetic diversity of coronaviruses in wild birds, Finland20177140836010.1080/20008686.2017.1408360636931030788065Open DOISearch in Google Scholar
Herrewegh A.A., Vennema H., Horzinek M.C., Rottier P.J., de Groot R.J.: The molecular genetics of feline coronaviruses: comparative sequence analysis of the ORF7a/7b transcription unit of different biotypes. Virology 1995, 212, 622–631.HerreweghA.A.VennemaH.HorzinekM.C.RottierP.J.de GrootR.J.The molecular genetics of feline coronaviruses: comparative sequence analysis of the ORF7a/7b transcription unit of different biotypes199521262263110.1006/viro.1995.152071313617571432Search in Google Scholar
Hoffmann M., Kleine-Weber H., Schroeder S., Krüger N., Herrler T., Erichsen S., Schiergens T.S., Herrler G., Wu N.-H., Nitsche A., Müller M.A., Drosten C., Pöhlmann S.: SARS-CoV-2 cell entry depends on ACE2 and TMPRSS2 and is blocked by a clinically proven protease inhibitor. Cell 2020, 181, 271–280, e278, doi: 10.1016/j.cell.2020.02.052.HoffmannM.Kleine-WeberH.SchroederS.KrügerN.HerrlerT.ErichsenS.SchiergensT.S.HerrlerG.WuN.-H.NitscheA.MüllerM.A.DrostenC.PöhlmannS.SARS-CoV-2 cell entry depends on ACE2 and TMPRSS2 and is blocked by a clinically proven protease inhibitor2020181271280e27810.1016/j.cell.2020.02.052710262732142651Open DOISearch in Google Scholar
Hohdatsu T., Nakamura M., Ishizuka Y., Yamada H., Koyama H.: A study on the mechanism of antibody-dependent enhancement of feline infectious peritonitis virus infection in feline macrophages by monoclonal antibodies. Arch Virol 1991, 120, 207–217.HohdatsuT.NakamuraM.IshizukaY.YamadaH.KoyamaH.A study on the mechanism of antibody-dependent enhancement of feline infectious peritonitis virus infection in feline macrophages by monoclonal antibodies199112020721710.1007/BF0131047670871751659798Search in Google Scholar
Hohdatsu T., Okada S., Koyama H.: Characterization of monoclonal antibodies against feline infectious peritonitis virus type II and antigenic relationship between feline, porcine, and canine coronaviruses. Arch Virol 1991, 117, 85–95.HohdatsuT.OkadaS.KoyamaH.Characterization of monoclonal antibodies against feline infectious peritonitis virus type II and antigenic relationship between feline, porcine, and canine coronaviruses1991117859510.1007/BF0131049470865861706593Search in Google Scholar
Jackwood M.W., Boynton T.O., Hilt D.A., McKinley E.T., Kissinger J.C., Paterson A.H., Robertson J., Lemke C., McCall A.W., Williams S.M., Jackwood J.W., Byrd L.A.: Emergence of a group 3 coronavirus through recombination. Virology 2010, 398, 98–108.JackwoodM.W.BoyntonT.O.HiltD.A.McKinleyE.T.KissingerJ.C.PatersonA.H.RobertsonJ.LemkeC.McCallA.W.WilliamsS.M.JackwoodJ.W.ByrdL.A.Emergence of a group 3 coronavirus through recombination20103989810810.1016/j.virol.2009.11.044711190520022075Search in Google Scholar
Jackwood M.W., de Wit S.: Infectious bronchitis. In: Diseases of Poultry edited by D.E. Swayne, Wiley-Blackwell. Hoboken, 2013, pp. 139–160.JackwoodM.W.de WitS.Infectious bronchitisedited bySwayneD.E.Wiley-BlackwellHoboken201313916010.1002/9781119421481.ch4Search in Google Scholar
Jackwood M.W., Hall D., Handel A.: Molecular evolution and emergence of avian gammacoronaviruses. Infect Gen Evol 2012, 12, 1305–1311.JackwoodM.W.HallD.HandelA.Molecular evolution and emergence of avian gammacoronaviruses2012121305131110.1016/j.meegid.2012.05.003710606822609285Search in Google Scholar
Jung K., Annamalai T., Lu Z., Saif L.J.: Comparative pathogenesis of US porcine epidemic diarrhea virus (PEDV) strain PC21A in conventional 9-day-old nursing piglets vs. 26-day-old weaned pigs. Vet Microbiol 2015, 178, 31–40.JungK.AnnamalaiT.LuZ.SaifL.J.Comparative pathogenesis of US porcine epidemic diarrhea virus (PEDV) strain PC21A in conventional 9-day-old nursing piglets vs2015178314010.1016/j.vetmic.2015.04.022711718125939885Search in Google Scholar
Keha A., Xue L., Yan S., Yue H., Tang C.: Prevalence of a novel bovine coronavirus strain with a recombinant hemagglutinin/ esterase gene in dairy calves in China. Transbound Emerg Dis 2019, 66, 1971–1981.KehaA.XueL.YanS.YueH.TangC.Prevalence of a novel bovine coronavirus strain with a recombinant hemagglutinin/ esterase gene in dairy calves in China2019661971198110.1111/tbed.13228716854531077561Search in Google Scholar
Kin N., Miszczak F., Diancourt L., Caro V., Moutou F., Vabret A., Ar Gouilh M.: Comparative molecular epidemiology of two closely related coronaviruses, bovine coronavirus (BCoV) and human coronavirus OC43 (HCoV-OC43), reveals a different evolutionary pattern. Infect Genet Evol 2016, 40, 186–191, doi: 10.1016/j.meegid.2016.03.006.KinN.MiszczakF.DiancourtL.CaroV.MoutouF.VabretA.ArGouilh M.Comparative molecular epidemiology of two closely related coronaviruses, bovine coronavirus (BCoV) and human coronavirus OC43 (HCoV-OC43), reveals a different evolutionary pattern20164018619110.1016/j.meegid.2016.03.006710619926969241Open DOISearch in Google Scholar
Laconi A., Listorti V., Franzo G., Cecchinato M., Naylor C., Lupini C., Catelli E.: Molecular characterization of whole genome sequence of infectious bronchitis virus 624I genotype confirms the close relationship with Q1 genotype. Transbound Emerg Dis 2019, 66, 207–216.LaconiA.ListortiV.FranzoG.CecchinatoM.NaylorC.LupiniC.CatelliE.Molecular characterization of whole genome sequence of infectious bronchitis virus 624I genotype confirms the close relationship with Q1 genotype20196620721610.1111/tbed.13000716853930126059Search in Google Scholar
Latinne A., Hu B., Olival K.J., Zhu G., Zhang L., Li H., Chmura A.A., Field H.E., Zambrana-Torrelio C., Epstein J.H., Li B., Zhang W., Wang L.-F., Shi Z.-L., Daszak P.: Origin and cross-species transmission of bat coronaviruses in China. bioRxiv 2020, doi: 10/1101/2020.05.31.116061.LatinneA.HuB.OlivalK.J.ZhuG.ZhangL.LiH.ChmuraA.A.FieldH.E.Zambrana-TorrelioC.EpsteinJ.H.LiB.ZhangW.WangL.-F.ShiZ.-L.DaszakP.Origin and cross-species transmission of bat coronaviruses in China202010/1101/2020.05.31.116061Open DOISearch in Google Scholar
Lau S.K., Woo P.C., Li K.S., Tsang A.K., Fan R.Y., Luk H.K., Cai J.P., Chan K.H., Zheng B.J., Wang M., Yuen K.Y.: Discovery of a novel coronavirus, China Rattus coronavirus HKU24, from Norway rats supports the murine origin of Betacoronavirus 1 and has implications for the ancestor of Betacoronavirus lineage A. J Virol 2015, 89, 3076–3092.LauS.K.WooP.C.LiK.S.TsangA.K.FanR.Y.LukH.K.CaiJ.P.ChanK.H.ZhengB.J.WangM.YuenK.Y.Discovery of a novel coronavirus, China Rattus coronavirus HKU24, from Norway rats supports the murine origin of Betacoronavirus 1 and has implications for the ancestor of Betacoronavirus lineage A2015893076309210.1128/JVI.02420-14433752325552712Search in Google Scholar
Lau S.K.P., Woo P.C.Y., Yip C.C.Y., Fan R.Y.Y., Huang Y., Wang M., Guo R., Lam C.S.F., Tsang A.K.L., Lai K.K.Y., Chan K.-H., Che X.-Y., Zheng B.-J., Yuen K.-Y.: Isolation and characterization of a novel Betacoronavirus subgroup A coronavirus, rabbit coronavirus HKU14, from domestic rabbits. J Virol 2012, 86, 5481–5496.LauS.K.P.WooP.C.Y.YipC.C.Y.FanR.Y.Y.HuangY.WangM.GuoR.LamC.S.F.TsangA.K.L.LaiK.K.Y.ChanK.-H.CheX.-Y.ZhengB.-J.YuenK.-Y.Isolation and characterization of a novel Betacoronavirus subgroup A coronavirus, rabbit coronavirus HKU14, from domestic rabbits2012865481549610.1128/JVI.06927-11334728222398294Search in Google Scholar
Laude H., Van Reeth K., Pensaert M.: Porcine respiratory coronavirus: molecular features and virus-host interactions. Vet Res 1993, 24, 125–150.LaudeH.VanReeth K.PensaertM.Porcine respiratory coronavirus: molecular features and virus-host interactions199324125150Search in Google Scholar
Le Poder S.: Feline and canine coronaviruses: common genetic and pathobiological features. Adv Virol 2011, 2011, 609465, doi: 10.1155/2011/609465.LePoder S.Feline and canine coronaviruses: common genetic and pathobiological features2011201160946510.1155/2011/609465326530922312347Open DOISearch in Google Scholar
Letko M., Marzi A., Munster V.: Functional assessment of cell entry and receptor usage for SARS-CoV-2 and other lineage B betacoronaviruses. Nat Microbiol 2020, 5, 562–569.LetkoM.MarziA.MunsterV.Functional assessment of cell entry and receptor usage for SARS-CoV-2 and other lineage B betacoronaviruses2020556256910.1038/s41564-020-0688-y709543032094589Search in Google Scholar
Li F.: Evidence for a common evolutionary origin of coronavirus spike protein receptor-binding subunits. J Virol 2012, 86, 2856–2858.LiF.Evidence for a common evolutionary origin of coronavirus spike protein receptor-binding subunits2012862856285810.1128/JVI.06882-11330224822205743Search in Google Scholar
Li F.: Structure, function, and evolution of coronavirus spike proteins. Ann Rev Virol 2016, 3, 237–261.LiF.Structure, function, and evolution of coronavirus spike proteins2016323726110.1146/annurev-virology-110615-042301545796227578435Search in Google Scholar
Li R., Qiao S., Zhang G.: Analysis of angiotensin-converting enzyme 2 (ACE2) from different species sheds some light on cross-species receptor usage of a novel coronavirus 2019-nCoV. J Infect 2020, 80, 469–496.LiR.QiaoS.ZhangG.Analysis of angiotensin-converting enzyme 2 (ACE2) from different species sheds some light on cross-species receptor usage of a novel coronavirus 2019-nCoV20208046949610.1016/j.jinf.2020.02.013712762032092392Search in Google Scholar
Li Z., He W., Lan Y., Zhao K., Lv X., Lu H., Ding N., Zhang J., Shi J., Shan C., Gao F.: The evidence of porcine hemagglutinating encephalomyelitis virus induced nonsuppurative encephalitis as the cause of death in piglets. Peer J 2016, 4, e2443–e2443.LiZ.HeW.LanY.ZhaoK.LvX.LuH.DingN.ZhangJ.ShiJ.ShanC.GaoF.The evidence of porcine hemagglutinating encephalomyelitis virus induced nonsuppurative encephalitis as the cause of death in piglets20164e2443e244310.7717/peerj.2443502878627672502Search in Google Scholar
Liais E., Croville G., Mariette J., Delverdier M., Lucas M.N., Klopp C., Lluch J., Donnadieu C., Guy J.S., Corrand L., Ducatez M.F., Guerin J.L.: Novel avian coronavirus and fulminating disease in guinea fowl, France. Emerg Infect Dis 2014, 20, 105–108.LiaisE.CrovilleG.MarietteJ.DelverdierM.LucasM.N.KloppC.LluchJ.DonnadieuC.GuyJ.S.CorrandL.DucatezM.F.GuerinJ.L.Novel avian coronavirus and fulminating disease in guinea fowl, France20142010510810.3201/eid2001.130774388472324377831Search in Google Scholar
Lu S., Chen Y., Qin K., Zhou J., Lou Y., Tan W.: Genetic and antigenic characterization of recombinant nucleocapsid proteins derived from canine coronavirus and canine respiratory coronavirus in China. Sci China Life Sci 2016, 59, 615–621.LuS.ChenY.QinK.ZhouJ.LouY.TanW.Genetic and antigenic characterization of recombinant nucleocapsid proteins derived from canine coronavirus and canine respiratory coronavirus in China20165961562110.1007/s11427-016-5038-1708928227084706Search in Google Scholar
Lv C., Xiao Y., Li X., Tian K.: Porcine epidemic diarrhea virus: current insights. Vir Adapt Treat 2016, 8, 1–12.LvC.XiaoY.LiX.TianK.Porcine epidemic diarrhea virus: current insights2016811210.2147/VAAT.S107275Search in Google Scholar
Ma G., Feng Y., Gao F., Wang J., Liu C., Li Y.: Biochemical and biophysical characterization of the transmissible gastroenteritis coronavirus fusion core. Biochem Biophys Res Commun 2005, 337, 1301–1307.MaG.FengY.GaoF.WangJ.LiuC.LiY.Biochemical and biophysical characterization of the transmissible gastroenteritis coronavirus fusion core20053371301130710.1016/j.bbrc.2005.09.189709286416236266Search in Google Scholar
MacLean O.A., Lytras S., Singer J.B., Weaver S., Pond S.L.K., Robertson D.L.: Evidence of significant natural selection in the evolution of SARS-CoV-2 in bats, not humans. bioRxiv 2020, doi: 10/1101/2020.05.28.122366.MacLeanO.A.LytrasS.SingerJ.B.WeaverS.PondS.L.K.RobertsonD.L.Evidence of significant natural selection in the evolution of SARS-CoV-2 in bats202010/1101/2020.05.28.122366Open DOISearch in Google Scholar
Mandelik R., Sarvas M., Jackova A., Salamunova S., Novotny J., Vilcek S.: First outbreak with chimeric swine enteric coronavirus (SeCoV) on pig farms in Slovakia - lessons to learn. Acta Vet Hun 2018, 66, 488–492.MandelikR.SarvasM.JackovaA.SalamunovaS.NovotnyJ.VilcekS.First outbreak with chimeric swine enteric coronavirus (SeCoV) on pig farms in Slovakia - lessons to learn20186648849210.1556/004.2018.04330264613Search in Google Scholar
Marandino A., Tomás G., Panzera Y., Greif G., Parodi-Talice A., Hernández M., Techera C., Hernández D., Pérez R.: Whole-genome characterization of Uruguayan strains of avian infectious bronchitis virus reveals extensive recombination between the two major South American lineages. Infect Gen Evol 2017, 54, 245–250.MarandinoA.TomásG.PanzeraY.GreifG.Parodi-TaliceA.HernándezM.TecheraC.HernándezD.PérezR.Whole-genome characterization of Uruguayan strains of avian infectious bronchitis virus reveals extensive recombination between the two major South American lineages20175424525010.1016/j.meegid.2017.07.009Search in Google Scholar
Martelli P., Lavazza A., Nigrelli A.D., Merialdi G., Alborali L.G., Pensaert M.B.: Epidemic of diarrhoea caused by porcine epidemic diarrhoea virus in Italy. Vet Rec 2008, 162, 307–310.MartelliP.LavazzaA.NigrelliA.D.MerialdiG.AlboraliL.G.PensaertM.B.Epidemic of diarrhoea caused by porcine epidemic diarrhoea virus in Italy200816230731010.1136/vr.162.10.307Search in Google Scholar
Martina B.E.E., Haagmans B.L., Kuiken T., Fouchier R.A.M., Rimmelzwaan G.F., Van Amerongen G., Peiris J.S.M., Lim W., Osterhaus A.D.M.E.: Virology: SARS virus infection of cats and ferrets. Nature 2003, 425, 915–915.MartinaB.E.E.HaagmansB.L.KuikenT.FouchierR.A.M.RimmelzwaanG.F.VanAmerongen G.PeirisJ.S.M.LimW.OsterhausA.D.M.E.Virology: SARS virus infection of cats and ferrets200342591591510.1038/425915aSearch in Google Scholar
Masters P.S., Perlman S.: Coronaviridae. In: Fields virology edited by D.M. Knipe and P.M. Howley, Lippincot Williams & Wilkins, Philadelphia, 2013, pp. 825–858.MastersP.S.PerlmanS.Coronaviridaeedited byKnipeD.M.andHowleyP.M.Lippincot Williams & WilkinsPhiladelphia2013825858Search in Google Scholar
Mohd H.A., Al-Tawfiq J.A., Memish Z.A.: Middle East Respiratory Syndrome Coronavirus (MERS-CoV) origin and animal reservoir. Virol J 2016, 13, 87, doi: 10.1186/s12985-016-0544-0.MohdH.A.Al-TawfiqJ.A.MemishZ.A.Middle East Respiratory Syndrome Coronavirus (MERS-CoV) origin and animal reservoir2016138710.1186/s12985-016-0544-0Open DOISearch in Google Scholar
Monchatre-Leroy E., Boué F., Boucher J.M., Renault C., Moutou F., Ar Gouilh M., Umhang G.: Identification of alpha and beta coronavirus in wildlife species in France: bats, rodents, rabbits, and hedgehogs. Viruses 2017, 9, 364.Monchatre-LeroyE.BouéF.BoucherJ.M.RenaultC.MoutouF.ArGouilh M.UmhangG.Identification of alpha and beta coronavirus in wildlife species in France: bats, rodents, rabbits, and hedgehogs2017936410.3390/v9120364Search in Google Scholar
Morales R.G., Umandal A.C., Lantican C.A.: Emerging and reemerging diseases in Asia and the Pacific with special emphasis on porcine epidemic diarrhoea. In: 25th Conference of the OIE Regional Commission for Asia, the Far East and Oceania Queenstown, (New Zealand) 27–30 November 2007, pp. 185–189.MoralesR.G.UmandalA.C.LanticanC.A.Emerging and reemerging diseases in Asia and the Pacific with special emphasis on porcine epidemic diarrhoea27–30November2007185189Search in Google Scholar
Motokawa K., Hohdatsu T., Hashimoto H., Koyama H.: Comparison of the amino acid sequence and phylogenetic analysis of the peplomer, integral membrane and nucleocapsid proteins of feline, canine and porcine coronaviruses. Microbiol Imm 1996, 40, 425–433.MotokawaK.HohdatsuT.HashimotoH.KoyamaH.Comparison of the amino acid sequence and phylogenetic analysis of the peplomer, integral membrane and nucleocapsid proteins of feline, canine and porcine coronaviruses19964042543310.1111/j.1348-0421.1996.tb01089.xSearch in Google Scholar
Muradrasoli S., Balint A., Wahlgren J., Waldenstrom J., Belak S., Blomberg J., Olsen B.: Prevalence and phylogeny of coronaviruses in wild birds from the Bering Strait area (Beringia). PLoS One 2010, 5, e13640.MuradrasoliS.BalintA.WahlgrenJ.WaldenstromJ.BelakS.BlombergJ.OlsenB.Prevalence and phylogeny of coronaviruses in wild birds from the Bering Strait area (Beringia)20105e1364010.1371/journal.pone.0013640Search in Google Scholar
Netherlands (Government of the): Government adopts advice to cull mink on infected farms. 3 June 2020. https://www.government.nl/latest/news/2020/06/09/government-adopts-advice-to-cull-mink-on-infected-farms3 June2020https://www.government.nl/latest/news/2020/06/09/government-adopts-advice-to-cull-mink-on-infected-farmsSearch in Google Scholar
Opressnig T.: Porcine epidemic diarrhea (PED) in Europe and strategies to control outbreaks. Jap J Vet Res. 2016, 64, 35–38.OpressnigT.Porcine epidemic diarrhea (PED) in Europe and strategies to control outbreaks2016643538Search in Google Scholar
Pedersen N.C.: Virologic and immunologic aspects of feline infectious peritonitis virus infection. Adv Exp Med Biol 1987, 218, 529–550.PedersenN.C.Virologic and immunologic aspects of feline infectious peritonitis virus infection198721852955010.1007/978-1-4684-1280-2_69Search in Google Scholar
Pensaert M.: Transmissible gastroenteritis virus (respiratory variant). In: Virus infections of porcines [, edited by M. Pensaert, Elsevier Science Publishers, Amsterdam, 1989.PensaertM.Transmissible gastroenteritis virus (respiratory variant)[, edited byPensaertM.Elsevier Science PublishersAmsterdam1989Search in Google Scholar
Pensaert M., Callebaut P., Vergote J.: Isolation of a porcine respiratory, non-enteric coronavirus related to transmissible gastroenteritis. Vet Quart 1986, 8, 257–261.PensaertM.CallebautP.VergoteJ.Isolation of a porcine respiratory, non-enteric coronavirus related to transmissible gastroenteritis1986825726110.1080/01652176.1986.9694050Search in Google Scholar
Pratelli A., Martella V., Decaro N., Tinelli A., Camero M., Cirone F., Elia G., Cavalli A., Corrente M., Greco G., Buonavoglia D., Gentile M., Tempesta M., Buonavoglia C.: Genetic diversity of a canine coronavirus detected in pups with diarrhoea in Italy. J Virol Methods 2003, 110, 9–17.PratelliA.MartellaV.DecaroN.TinelliA.CameroM.CironeF.EliaG.CavalliA.CorrenteM.GrecoG.BuonavogliaD.GentileM.TempestaM.BuonavogliaC.Genetic diversity of a canine coronavirus detected in pups with diarrhoea in Italy200311091710.1016/S0166-0934(03)00081-8Search in Google Scholar
Priestnall S.L., Brownlie J., Dubovi E.J., Erles K.: Serological prevalence of canine respiratory coronavirus. Vet Microbiol 2006, 115, 43–53.PriestnallS.L.BrownlieJ.DuboviE.J.ErlesK.Serological prevalence of canine respiratory coronavirus2006115435310.1016/j.vetmic.2006.02.008711734916551493Search in Google Scholar
Priestnall S.L., Pratelli A., Brownlie J., Erles K.: Serological prevalence of canine respiratory coronavirus in southern Italy and epidemiological relationship with canine enteric coronavirus. J Vet Diag Inv 2007, 19, 176–180.PriestnallS.L.PratelliA.BrownlieJ.ErlesK.Serological prevalence of canine respiratory coronavirus in southern Italy and epidemiological relationship with canine enteric coronavirus20071917618010.1177/10406387070190020617402612Search in Google Scholar
Pusterla N., Vin R., Leutenegger C., Mittel L.D., Divers T.J.: Equine coronavirus: An emerging enteric virus of adult horses. Equine Vet Educ 2016, 28, 216–223.PusterlaN.VinR.LeuteneggerC.MittelL.D.DiversT.J.Equine coronavirus: An emerging enteric virus of adult horses20162821622310.1111/eve.12453716371432313392Search in Google Scholar
Rasmussen T.B., Boniotti M.B., Papetti A., Grasland B., Frossard J.-P., Dastjerdi A., Hulst M., Hanke D., Pohlmann A., Blome S., van der Poel W.H.M., Steinbach F., Blanchard Y., Lavazza A., Bøtner A., Belsham G.J.: Full-length genome sequences of porcine epidemic diarrhoea virus strain CV777; Use of NGS to analyse genomic and sub-genomic RNAs. PLoS One 2018, 13, e0193682, doi: 10.1371/journal.pone.0193682.RasmussenT.B.BoniottiM.B.PapettiA.GraslandB.FrossardJ.-P.DastjerdiA.HulstM.HankeD.PohlmannA.BlomeS.van derPoel W.H.M.SteinbachF.BlanchardY.LavazzaA.BøtnerA.BelshamG.J.Full-length genome sequences of porcine epidemic diarrhoea virus strain CV777; Use of NGS to analyse genomic and sub-genomic RNAs201813e019368210.1371/journal.pone.0193682583226629494671Open DOISearch in Google Scholar
Saif L.J., Jung K.: Comparative pathogenesis of bovine and porcine respiratory coronaviruses in the animal host species and SARS-CoV-2 in humans. J Clin Microbiol 2020, JCM.01355-20. doi: 10.1128/JCM.01355-20.SaifL.J.JungK.Comparative pathogenesis of bovine and porcine respiratory coronaviruses in the animal host species and SARS-CoV-2 in humans2020JCM.01355-2010.1128/JCM.01355-20738354032522830Open DOISearch in Google Scholar
Saif L.J., Pensaert M.B., Sestak K., Yeo S.-G., Jung K.: Coronaviruses. In: Diseases of swine edited by J.J. Zimmerman, L.A. Karriker, A. Ramirez, K.J. Schwartz, G.W. Stevenson, J. Zhang, Wiley-Blackwell, Ames, 2012, pp. 501–524.SaifL.J.PensaertM.B.SestakK.YeoS.-G.JungK.Coronavirusesedited byZimmermanJ.J.KarrikerL.A.RamirezA.SchwartzK.J.StevensonG.W.ZhangJ.Wiley-BlackwellAmes2012501524Search in Google Scholar
Saldanha I.F., Lawson B., Goharriz H., Rodriguez-Ramos Fernandez J., John S.K., Fooks A.R., Cunningham A.A., Johnson N., Horton D.L.: Extension of the known distribution of a novel clade C betacoronavirus in a wildlife host. Epidemiol Infect 2019, 147, e169.SaldanhaI.F.LawsonB.GoharrizH.Rodriguez-RamosFernandez J.JohnS.K.FooksA.R.CunninghamA.A.JohnsonN.HortonD.L.Extension of the known distribution of a novel clade C betacoronavirus in a wildlife host2019147e16910.1017/S0950268819000207651846831063092Search in Google Scholar
Salem E., Dhanasekaran V., Cassard H., Hause B., Maman S., Meyer G., Ducatez M.F.: Global transmission, spatial segregation, and recombination determine the long-term evolution and epidemiology of bovine coronaviruses. Viruses 2020, 12, 534, doi: 10.3390/v12050534.SalemE.DhanasekaranV.CassardH.HauseB.MamanS.MeyerG.DucatezM.F.Global transmission, spatial segregation, and recombination determine the long-term evolution and epidemiology of bovine coronaviruses20201253410.3390/v12050534729037932414076Open DOISearch in Google Scholar
Sanchez C.M., Izeta A., Sanchez-Morgado J.M., Alonso S., Sola I., Balasch M., Plana-Duran J., Enjuanes L.: Targeted recombination demonstrates that the spike gene of transmissible gastroenteritis coronavirus is a determinant of its enteric tropism and virulence. J Virol 1999, 73, 7607–7618.SanchezC.M.IzetaA.Sanchez-MorgadoJ.M.AlonsoS.SolaI.BalaschM.Plana-DuranJ.EnjuanesL.Targeted recombination demonstrates that the spike gene of transmissible gastroenteritis coronavirus is a determinant of its enteric tropism and virulence1999737607761810.1128/JVI.73.9.7607-7618.199910428810438851Search in Google Scholar
Schalk A.F.: An apparent new respiratory disease of baby chicks. J Am Vet Med Assoc 1931, 78, 413–422.SchalkA.F.An apparent new respiratory disease of baby chicks193178413422Search in Google Scholar
Shi J., Wen Z., Zhong G., Yang H., Wang C., Huang B., Liu R., He X., Shuai L., Sun Z., Zhao Y., Liu P., Liang L., Cui P., Wang J., Zhang X., Guan Y., Tan W., Wu G., Chen H., Bu Z.: Susceptibility of ferrets, cats, dogs, and other domesticated animals to SARS–coronavirus 2. Science 2020, 368, 1016–1020, doi: 10.1126/science.abb7015.ShiJ.WenZ.ZhongG.YangH.WangC.HuangB.LiuR.HeX.ShuaiL.SunZ.ZhaoY.LiuP.LiangL.CuiP.WangJ.ZhangX.GuanY.TanW.WuG.ChenH.BuZ.Susceptibility of ferrets, cats, dogs, and other domesticated animals to SARS–coronavirus 220203681016102010.1126/science.abb7015716439032269068Open DOISearch in Google Scholar
Siddell S.G., Anderson R., Cavanagh D., Fujiwara K., Klenk H.D., Macnaughton M.R., Pensaert M., Stohlman S.A., Sturman L., van der Zeijst B.A.: Coronaviridae. Intervirology 1983, 20, 181–189.SiddellS.G.AndersonR.CavanaghD.FujiwaraK.KlenkH.D.MacnaughtonM.R.PensaertM.StohlmanS.A.SturmanL.van derZeijst B.A.Coronaviridae19832018118910.1159/00014939071826416654644Search in Google Scholar
Song J.H., Shim J.K., Choi H.J.: Quercetin 7-rhamnoside reduces porcine epidemic diarrhea virus replication via independent pathway of viral induced reactive oxygen species. Virol J 2011, 8, 460, doi: 10.1186/1743-422X-8-460.SongJ.H.ShimJ.K.ChoiH.J.Quercetin 7-rhamnoside reduces porcine epidemic diarrhea virus replication via independent pathway of viral induced reactive oxygen species2011846010.1186/1743-422X-8-460Open DOISearch in Google Scholar
Steinbach F., Dastjerdi A., Peake J., La Rocca S.A., Tobin F.P., Frossard J.-P., Williamson S.: A retrospective study detects a novel variant of porcine epidemic diarrhea virus in England in archived material from the year 2000. PeerJ 2016, 4, e2564, doi: 10.7717/peerj.2564.SteinbachF.DastjerdiA.PeakeJ.LaRocca S.A.TobinF.P.FrossardJ.-P.WilliamsonS.A retrospective study detects a novel variant of porcine epidemic diarrhea virus in England in archived material from the year 200020164e256410.7717/peerj.2564Open DOISearch in Google Scholar
Su S., Wong G., Shi W., Liu J., Lai A.C.K., Zhou J., Liu W., Bi Y., Gao G.F.: Epidemiology, genetic recombination, and pathogenesis of coronaviruses. Trends Microbiol 2016, 24, 490–502.SuS.WongG.ShiW.LiuJ.LaiA.C.K.ZhouJ.LiuW.BiY.GaoG.F.Epidemiology, genetic recombination, and pathogenesis of coronaviruses20162449050210.1016/j.tim.2016.03.003Search in Google Scholar
Suzuki T., Otake Y., Uchimoto S., Hasebe A., Goto Y.: Genomic characterization and phylogenetic classification of bovine coronaviruses through whole genome sequence analysis. Viruses 2020, 12, 183, doi: 10.3390/v12020183.SuzukiT.OtakeY.UchimotoS.HasebeA.GotoY.Genomic characterization and phylogenetic classification of bovine coronaviruses through whole genome sequence analysis20201218310.3390/v12020183Open DOISearch in Google Scholar
Tang X., Wu C., Li X., Song Y., Yao X., Wu X., Duan Y., Zhang H., Wang Y., Qian Z., Cui J., Lu J.: On the origin and continuing evolution of SARS-CoV-2. Nat Sci Rev 2020, 7, 1012–1023.TangX.WuC.LiX.SongY.YaoX.WuX.DuanY.ZhangH.WangY.QianZ.CuiJ.LuJ.On the origin and continuing evolution of SARS-CoV-2202071012102310.1093/nsr/nwaa036Search in Google Scholar
Temmam S., Barbarino A., Maso D., Behillil S., Enouf V., Huon C., Jaraud A., Chevallier L., Backovic M., Pérot P., Verwaerde P., Tiret L., van der Werf S., Eloit M.: Absence of SARS-CoV-2 infection in cats and dogs in close contact with a cluster of COVID-19 patients in a veterinary campus. bioRxiv 2020, doi: 10/1101/2020.04.07.029090.TemmamS.BarbarinoA.MasoD.BehillilS.EnoufV.HuonC.JaraudA.ChevallierL.BackovicM.PérotP.VerwaerdeP.TiretL.van derWerf S.EloitM.Absence of SARS-CoV-2 infection in cats and dogs in close contact with a cluster of COVID-19 patients in a veterinary campus202010/1101/2020.04.07.029090Open DOISearch in Google Scholar
Tennant B.J., Gaskell R.M., Kelly D.F., Carter S.D., Gaskell C.J.: Canine coronavirus infection in the dog following oronasal inoculation. Res Vet Sci 1991, 51, 11–18.TennantB.J.GaskellR.M.KellyD.F.CarterS.D.GaskellC.J.Canine coronavirus infection in the dog following oronasal inoculation199151111810.1016/0034-5288(91)90023-HSearch in Google Scholar
Tilocca B., Soggiu A., Musella V., Britti D., Sanguinetti M., Urbani A., Roncada P.: Molecular basis of COVID-19 relationships in different species: a one health perspective. Microbes Infect 2020, 22, 218–220.TiloccaB.SoggiuA.MusellaV.BrittiD.SanguinettiM.UrbaniA.RoncadaP.Molecular basis of COVID-19 relationships in different species: a one health perspective20202221822010.1016/j.micinf.2020.03.002710264832194253Search in Google Scholar
Tilocca B., Soggiu A., Sanguinetti M., Musella V., Britti D., Bonizzi L., Urbani A., Roncada P.: Comparative computational analysis of SARS-CoV-2 nucleocapsid protein epitopes in taxonomically related coronaviruses. Microbes Infect 2020, 22, 188–194.TiloccaB.SoggiuA.SanguinettiM.MusellaV.BrittiD.BonizziL.UrbaniA.RoncadaP.Comparative computational analysis of SARS-CoV-2 nucleocapsid protein epitopes in taxonomically related coronaviruses20202218819410.1016/j.micinf.2020.04.002715624632302675Search in Google Scholar
Tsoleridis T., Onianwa O., Horncastle E., Dayman E., Zhu M., Danjittrong T., Wachtl M., Behnke J.M., Chapman S., Strong V., Dobbs P., Ball J.K., Tarlinton R.E., McClure C.P.: Discovery of novel alphacoronaviruses in european rodents and shrews. Viruses 2016, 8, 84, doi: 10.3390/v8030084.TsoleridisT.OnianwaO.HorncastleE.DaymanE.ZhuM.DanjittrongT.WachtlM.BehnkeJ.M.ChapmanS.StrongV.DobbsP.BallJ.K.TarlintonR.E.McClureC.P.Discovery of novel alphacoronaviruses in european rodents and shrews201688410.3390/v8030084481027427102167Open DOISearch in Google Scholar
United States Department of Agriculture Animal and Plant Health Inspection Service: USDA Statement on the confirmation of COVID-19 in a tiger in New York. April 6, 2020. https://www.aphis.usda.gov/aphis/newsroom/news/sa_by_date/sa-2020/ny-zoo-covid-19April 62020https://www.aphis.usda.gov/aphis/newsroom/news/sa_by_date/sa-2020/ny-zoo-covid-19Search in Google Scholar
Valastro V., Holmes E.C., Britton P., Fusaro A., Jackwood M.W., Cattoli G., Monne I.: S1 gene-based phylogeny of infectious bronchitis virus: An attempt to harmonize virus classification. Infect Genet Evol 2016, 39, 349–364.ValastroV.HolmesE.C.BrittonP.FusaroA.JackwoodM.W.CattoliG.MonneI.S1 gene-based phylogeny of infectious bronchitis virus: An attempt to harmonize virus classification20163934936410.1016/j.meegid.2016.02.015717298026883378Search in Google Scholar
Vennema H., Poland A., Foley J., Pedersen N.C.: Feline infectious peritonitis viruses arise by mutation from endemic feline enteric coronaviruses. Virology 1998, 243, 150–157.VennemaH.PolandA.FoleyJ.PedersenN.C.Feline infectious peritonitis viruses arise by mutation from endemic feline enteric coronaviruses199824315015710.1006/viro.1998.904571317599527924Search in Google Scholar
Vijgen L., Keyaerts E., Moës E., Thoelen I., Wollants E., Lemey P., Vandamme A.M., Van Ranst M.: Complete genomic sequence of human coronavirus OC43: molecular clock analysis suggests a relatively recent zoonotic coronavirus transmission event. J Virol 2005, 79, 1595–1604.VijgenL.KeyaertsE.MoësE.ThoelenI.WollantsE.LemeyP.VandammeA.M.VanRanst M.Complete genomic sequence of human coronavirus OC43: molecular clock analysis suggests a relatively recent zoonotic coronavirus transmission event2005791595160410.1128/JVI.79.3.1595-1604.200554410715650185Search in Google Scholar
Vlasova A.N., Wang Q., Jung K., Langel S.N., Malik Y.S., Saif L.J.: Porcine coronaviruses. Emerg Trans Animal Virol 2020, 79–110.VlasovaA.N.WangQ.JungK.LangelS.N.MalikY.S.SaifL.J.Porcine coronaviruses20207911010.1007/978-981-15-0402-0_4Search in Google Scholar
Wang L.F., Eaton B.T.: Bats, civets and the emergence of SARS. Curr Top Microbiol Immunol 2007, 315, 325–344.WangL.F.EatonB.T.Bats, civets and the emergence of SARS200731532534410.1007/978-3-540-70962-6_13712008817848070Search in Google Scholar
Wang Q., Vlasova A.N., Kenney S.P., Saif L.J.: Emerging and re-emerging coronaviruses in pigs. Curr Opinion Virol 2019, 34, 39–49.WangQ.VlasovaA.N.KenneyS.P.SaifL.J.Emerging and re-emerging coronaviruses in pigs201934394910.1016/j.coviro.2018.12.001710285230654269Search in Google Scholar
Wang W., Lin X.D., Guo W.P., Zhou R.H., Wang M.R., Wang C.Q., Ge S., Mei S.H., Li M.H., Shi M., Holmes E.C., Zhang Y.Z.: Discovery, diversity and evolution of novel coronaviruses sampled from rodents in China. Virology 2015, 474, 19–27.WangW.LinX.D.GuoW.P.ZhouR.H.WangM.R.WangC.Q.GeS.MeiS.H.LiM.H.ShiM.HolmesE.C.ZhangY.Z.Discovery, diversity and evolution of novel coronaviruses sampled from rodents in China2015474192710.1016/j.virol.2014.10.017711205725463600Search in Google Scholar
Wickramasinghe I.N.A., de Vries R.P., Weerts E.A.W.S., van Beurden S.J., Peng W., McBride R., Ducatez M., Guy J., Brown P., Eterradossi N., Grone A., Paulson J.C., Verheijea M.H.: Novel receptor specificity of avian gammacoronaviruses that cause enteritis. J Virol 2015, 89, 8783–8792.WickramasingheI.N.A.de VriesR.P.WeertsE.A.W.S.van BeurdenS.J.PengW.McBrideR.DucatezM.GuyJ.BrownP.EterradossiN.GroneA.PaulsonJ.C.VerheijeaM.H.Novel receptor specificity of avian gammacoronaviruses that cause enteritis2015898783879210.1128/JVI.00745-15452409026063435Search in Google Scholar
Wille M., Harvey E., Shi M., Gonzalez-Acuna D., Holmes E.C., Hurt A.C.: Sustained RNA virome diversity in Antarctic penguins and their ticks. Isme J 2020, 14, 1768–1782.WilleM.HarveyE.ShiM.Gonzalez-AcunaD.HolmesE.C.HurtA.C.Sustained RNA virome diversity in Antarctic penguins and their ticks2020141768178210.1038/s41396-020-0643-1730517632286545Search in Google Scholar
Wille M., Muradrasoli S., Nilsson A., Jarhult J.D.: High prevalence and putative lineage maintenance of avian coronaviruses in Scandinavian waterfowl. PLoS One 2016, 11, e150198, doi: 10.1371/journal.pone.0150198.WilleM.MuradrasoliS.NilssonA.JarhultJ.D.High prevalence and putative lineage maintenance of avian coronaviruses in Scandinavian waterfowl201611e15019810.1371/journal.pone.0150198477742026938459Open DOISearch in Google Scholar
Woo P.C., Lau S.K., Huang Y., Yuen K.Y.: Coronavirus diversity, phylogeny and interspecies jumping. Exp Biol Med (Maywood) 2009, 234, 1117–1127.WooP.C.LauS.K.HuangY.YuenK.Y.Coronavirus diversity, phylogeny and interspecies jumping20092341117112710.3181/0903-MR-9419546349Search in Google Scholar
World Organisation for Animal Health (OIE): Terrestrial Animal Health Code 28th Edition, Paris, 2019. http://www.oie.int/en/international-standard-setting/terrestrial-code/access-online/Paris2019http://www.oie.int/en/international-standard-setting/terrestrial-code/access-online/Search in Google Scholar
World Organisation for Animal Health (OIE): Considerations for sampling, testing, and reporting of SARS-CoV-2 in animals, Paris, 2020. http://www.oie.int/fileadmin/Home/eng/Our_scientific_expertise/docs/pdf/COV-19/Sampling_Testing_and_Reporting_of_SARS-CoV-2_in_animals_final_7May_2020.pdfParis2020http://www.oie.int/fileadmin/Home/eng/Our_scientific_expertise/docs/pdf/COV-19/Sampling_Testing_and_Reporting_of_SARS-CoV-2_in_animals_final_7May_2020.pdfSearch in Google Scholar
Yachi A., Mochizuki M.: Survey of dogs in Japan for group 2 canine coronavirus infection. J Clin Microbiol 2006, 44, 2615–2618.YachiA.MochizukiM.Survey of dogs in Japan for group 2 canine coronavirus infection2006442615261810.1128/JCM.02397-05148946916825396Search in Google Scholar
Zeng Q., Langereis M.A., van Vliet A.L.W., Huizinga E.G., de Groot R.J.: Structure of coronavirus hemagglutinin-esterase offers insight into corona and influenza virus evolution. Proc Natl Acad Sci U S A 2008, 105, 9065–9069.ZengQ.LangereisM.A.van VlietA.L.W.HuizingaE.G.de GrootR.J.Structure of coronavirus hemagglutinin-esterase offers insight into corona and influenza virus evolution20081059065906910.1073/pnas.0800502105244936518550812Search in Google Scholar
Zhang J., Guy J.S., Snijder E.J., Denniston D.A., Timoney P.J., Balasuriya U.B.: Genomic characterization of equine coronavirus. Virology 2007, 369, 92–104.ZhangJ.GuyJ.S.SnijderE.J.DennistonD.A.TimoneyP.J.BalasuriyaU.B.Genomic characterization of equine coronavirus20073699210410.1016/j.virol.2007.06.035710328717706262Search in Google Scholar
Zhang J.Q.: Porcine deltacoronavirus: Overview of infection dynamics, diagnostic methods, prevalence and genetic evolution. Virus Res 2016, 226, 71–84.ZhangJ.Q.Porcine deltacoronavirus: Overview of infection dynamics, diagnostic methods, prevalence and genetic evolution2016226718410.1016/j.virusres.2016.05.028711455527270129Search in Google Scholar
Zhang Q., Zhang H., Huang K., Yang Y., Hui X., Gao J., He X., Li C., Gong W., Zhang Y., Peng C., Gao X., Chen H., Zou Z., Shi Z., Jin M.: SARS-CoV-2 neutralizing serum antibodies in cats: a serological investigation. bioRxiv 2020, doi: 10/1101/2020.04.01.021196.ZhangQ.ZhangH.HuangK.YangY.HuiX.GaoJ.HeX.LiC.GongW.ZhangY.PengC.GaoX.ChenH.ZouZ.ShiZ.JinM.SARS-CoV-2 neutralizing serum antibodies in cats: a serological investigation202010/1101/2020.04.01.021196Open DOISearch in Google Scholar
Zhang X.M., Herbst W., Kousoulas K.G., Storz J.: Biological and genetic characterization of a hemagglutinating coronavirus isolated from a diarrhoeic child. J Med Virol 1994, 44, 152–161.ZhangX.M.HerbstW.KousoulasK.G.StorzJ.Biological and genetic characterization of a hemagglutinating coronavirus isolated from a diarrhoeic child19944415216110.1002/jmv.189044020771665977852955Search in Google Scholar
Zhao J., Chen D., Szabla R., Zheng M., Li G., Du P., Zheng S., Li X., Song C., Li R., Guo J.-T., Junop M., Zeng H., Lin H.: Broad and differential animal ACE2 receptor usage by SARS-CoV-2. bioRxiv 2020, doi: 10/1101/2020.04.19.048710ZhaoJ.ChenD.SzablaR.ZhengM.LiG.DuP.ZhengS.LiX.SongC.LiR.GuoJ.-T.JunopM.ZengH.LinH.Broad and differential animal ACE2 receptor usage by SARS-CoV-2202010/1101/2020.04.19.048710Open DOISearch in Google Scholar
Zhou L., Li Q.N., Su J.N., Chen G.H., Wu Z.X., Luo Y., Wu R.T., Sun Y., Lan T., Ma J.Y.: The re-emerging of SADS-CoV infection in pig herds in Southern China. Transbound Emerg Dis 2019, 66, 2180–2183.ZhouL.LiQ.N.SuJ.N.ChenG.H.WuZ.X.LuoY.WuR.T.SunY.LanT.MaJ.Y.The re-emerging of SADS-CoV infection in pig herds in Southern China2019662180218310.1111/tbed.13270716856231207129Search in Google Scholar
Zhou P., Fan H., Lan T., Yang X.-L., Shi W.-F., Zhang W., Zhu Y., Zhang Y.-W., Xie Q.-M., Mani S., Zheng X.-S., Li B., Li J.-M., Guo H., Pei G.-Q., An X.-P., Chen J.-W., Zhou L., Mai K.-J., Wu Z.-X., Li D., Anderson D.E., Zhang L.-B., Li S.-Y., Mi Z.-Q., He T.-T., Cong F., Guo P.-J., Huang R., Luo Y., Liu X.-L., Chen J., Huang Y., Sun Q., Zhang X.-L.-L., Wang Y.-Y., Xing S.-Z., Chen Y.-S., Sun Y., Li J., Daszak P., Wang L.-F., Shi Z.-L., Tong Y.-G., Ma J.-Y.: Fatal swine acute diarrhoea syndrome caused by an HKU2-related coronavirus of bat origin. Nature 2018, 556, 255–258.ZhouP.FanH.LanT.YangX.-L.ShiW.-F.ZhangW.ZhuY.ZhangY.-W.XieQ.-M.ManiS.ZhengX.-S.LiB.LiJ.-M.GuoH.PeiG.-Q.AnX.-P.ChenJ.-W.ZhouL.MaiK.-J.WuZ.-X.LiD.AndersonD.E.ZhangL.-B.LiS.-Y.MiZ.-Q.HeT.-T.CongF.GuoP.-J.HuangR.LuoY.LiuX.-L.ChenJ.HuangY.SunQ.ZhangX.-L.-L.WangY.-Y.XingS.-Z.ChenY.-S.SunY.LiJ.DaszakP.WangL.-F.ShiZ.-L.TongY.-G.MaJ.-Y.Fatal swine acute diarrhoea syndrome caused by an HKU2-related coronavirus of bat origin201855625525810.1038/s41586-018-0010-9709498329618817Search in Google Scholar
Zhou P., Yang X.-L., Wang X.-G., Hu B., Zhang L., Zhang W., Si H.-R., Zhu Y., Li B., Huang C.-L., Chen H.-D., Chen J., Luo Y., Guo H., Jiang R.-D., Liu M.-Q., Chen Y., Shen X.-R., Wang X., Zheng X.-S., Zhao K., Chen Q.-J., Deng F., Liu L.-L., Yan B., Zhan F.-X., Wang Y.-Y., Xiao G.-F., Shi Z.-L.: A pneumonia outbreak associated with a new coronavirus of probable bat origin. Nature 2020, 579, 270–273.ZhouP.YangX.-L.WangX.-G.HuB.ZhangL.ZhangW.SiH.-R.ZhuY.LiB.HuangC.-L.ChenH.-D.ChenJ.LuoY.GuoH.JiangR.-D.LiuM.-Q.ChenY.ShenX.-R.WangX.ZhengX.-S.ZhaoK.ChenQ.-J.DengF.LiuL.-L.YanB.ZhanF.-X.WangY.-Y.XiaoG.-F.ShiZ.-L.A pneumonia outbreak associated with a new coronavirus of probable bat origin202057927027310.1038/s41586-020-2012-7709541832015507Search in Google Scholar
Zhuang Q.Y., Wang K.C., Liu S., Hou G.Y., Jiang W.M., Wang S.C., Li J.P., Yu J.M., Chen J.M.: Genomic analysis and surveillance of the coronavirus dominant in ducks in China. PLoS One 2015, 10, e0129256, doi: 10.1371/journal.pone.0129256.ZhuangQ.Y.WangK.C.LiuS.HouG.Y.JiangW.M.WangS.C.LiJ.P.YuJ.M.ChenJ.M.Genomic analysis and surveillance of the coronavirus dominant in ducks in China201510e012925610.1371/journal.pone.0129256445980926053682Open DOISearch in Google Scholar