Locus | |||||||
---|---|---|---|---|---|---|---|
concat14_A_0 | 4 | 249 | 0.474 | 0.494 | 0.461 | NS | 0.0229 |
EMILY_A_0 | 6 | 249 | 0.763 | 0.770 | 0.731 | NS | 0.0009 |
csolfagus_31 | 13 | 249 | 0.855 | 0.858 | 0.842 | NS | −0.0005 |
mfc11 | 9 | 249 | 0.353 | 0.616 | 0.594 | ||
DE576_A_0 | 7 | 248 | 0.710 | 0.669 | 0.613 | NS | −0.0325 |
csolfagus_05 | 8 | 249 | 0.675 | 0.679 | 0.639 | NS | 0.0068 |
FS1-03 | 14 | 246 | 0.528 | 0.622 | 0.594 | ** | |
mfc5 | 22 | 249 | 0.669 | 0.906 | 0.897 | ||
csolfagus_19 | 13 | 249 | 0.803 | 0.844 | 0.824 | NS | 0.0262 |
csolfagus_06 | 12 | 248 | 0.859 | 0.867 | 0.851 | NS | 0.0042 |
sfc0036 | 8 | 248 | 0.786 | 0.772 | 0.744 | NS | −0.0114 |
mfc7 | 9 | 249 | 0.578 | 0.596 | 0.559 | NS | |
ERHBI_A_0 | 6 | 249 | 0.514 | 0.530 | 0.491 | NS | 0.0163 |
EEU75_A_0 | 11 | 245 | 0.808 | 0.805 | 0.777 | NS | −0.0040 |
Fagsyl_002929 | 11 | 247 | 0.765 | 0.729 | 0.693 | NS | −0.0269 |
Fagsyl_003849 | 14 | 247 | 0.814 | 0.808 | 0.783 | NS | −0.0034 |
DZ447_A_0 | 4 | 245 | 0.592 | 0.593 | 0.545 | NS | 0.0051 |
csolfagus_29 | 8 | 248 | 0.435 | 0.436 | 0.400 | NS | −0.001 |
Fagsyl_001018 | 9 | 246 | 0.390 | 0.656 | 0.608 | ||
DUKCT_A_0 | 8 | 246 | 0.537 | 0.569 | 0.449 | NS | 0.0291 |
Fagsyl_003093 | 12 | 194 | 0.216 | 0.571 | 0.530 | ||
Mean | 9.905 | 245 | 0.625 | 0.685 | 0.649 | ||
SD | 4.098 | 0.183 | 0.134 | 0.146 | |||
SE | 0.894 | 0.040 | 0.029 | 0.032 |
Population | ||||||||
---|---|---|---|---|---|---|---|---|
1 | Mean | 19.524 | 6.905 | 3.925 | 1.447 | 0.635 | 0.674 | 0.074 |
0.290 | 0.581 | 0.522 | 0.102 | 0.046 | 0.030 | 0.042 | ||
2 | Mean | 19.571 | 6.476 | 3.583 | 1.414 | 0.629 | 0.662 | 0.072 |
0.335 | 0.550 | 0.339 | 0.093 | 0.057 | 0.034 | 0.063 | ||
3 | Mean | 19.381 | 6.238 | 3.427 | 1.363 | 0.595 | 0.650 | 0.089 |
0.288 | 0.530 | 0.335 | 0.095 | 0.047 | 0.033 | 0.054 | ||
4 | Mean | 19.667 | 6.571 | 3.627 | 1.410 | 0.623 | 0.667 | 0.069 |
0.159 | 0.500 | 0.364 | 0.091 | 0.049 | 0.032 | 0.054 | ||
5 | Mean | 19.810 | 6.667 | 3.625 | 1.416 | 0.632 | 0.664 | 0.045 |
0.190 | 0.618 | 0.383 | 0.095 | 0.048 | 0.032 | 0.054 | ||
6 | Mean | 29.381 | 6.905 | 3.549 | 1.393 | 0.607 | 0.651 | 0.082 |
0.288 | 0.589 | 0.417 | 0.098 | 0.044 | 0.032 | 0.042 | ||
7 | Mean | 29.857 | 7.238 | 3.792 | 1.439 | 0.623 | 0.667 | 0.064 |
0.143 | 0.617 | 0.419 | 0.104 | 0.044 | 0.035 | 0.046 | ||
8 | Mean | 29.667 | 7.381 | 3.879 | 1.484 | 0.630 | 0.678 | 0.064 |
0.333 | 0.674 | 0.502 | 0.099 | 0.039 | 0.030 | 0.046 | ||
9 | Mean | 29.190 | 6.905 | 3.501 | 1.415 | 0.654 | 0.670 | 0.041 |
0.190 | 0.625 | 0.290 | 0.088 | 0.043 | 0.028 | 0.038 | ||
10 | Mean | 29.143 | 6.905 | 3.648 | 1.419 | 0.619 | 0.662 | 0.062 |
0.469 | 0.625 | 0.419 | 0.098 | 0.042 | 0.032 | 0.046 | ||
Total | Mean | 24.519 | 6.819 | 3.655 | 1.420 | 0.625 | 0.664 | 0.066 |
0.352 | 0.185 | 0.126 | 0.030 | 0.014 | 0.010 | 0.015 |
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | |
---|---|---|---|---|---|---|---|---|---|---|
0.000 | 1 | |||||||||
0.067 | 0.000 | 2 | ||||||||
0.071 | 0.078 | 0.000 | 3 | |||||||
0.064 | 0.061 | 0.069 | 0.000 | 4 | ||||||
0.078 | 0.061 | 0.064 | 0.049 | 0.000 | 5 | |||||
0.062 | 0.070 | 0.076 | 0.061 | 0.077 | 0.000 | 6 | ||||
0.064 | 0.059 | 0.053 | 0.051 | 0.062 | 0.067 | 0.000 | 7 | |||
0.082 | 0.062 | 0.064 | 0.062 | 0.067 | 0.056 | 0.049 | 0.000 | 8 | ||
0.079 | 0.075 | 0.088 | 0.081 | 0.091 | 0.056 | 0.074 | 0.057 | 0.000 | 9 | |
0.055 | 0.065 | 0.074 | 0.065 | 0.072 | 0.079 | 0.060 | 0.061 | 0.087 | 0.000 | 10 |
No. of Population | Provenance Name | Average Altitude (m a.s.l.) | Geographic Coordinates | No. of Samples | |
---|---|---|---|---|---|
latitude | longitude | ||||
1 | Frýdlant | 441 | 50°52′24.1″N | 15°06′36.1″E | 20 |
2 | Kladská | 755 | 50°00′11.8″N | 12°38′55.5″E | 20 |
3 | Litvínov | 794 | 50°36′46.8″N | 13°23′14.5″E | 20 |
4 | Boubín | 916 | 49°09′05.5″N | 13°40′03.2″E | 20 |
5 | Nové Hrady | 863 | 48°39′46.6″N | 14°40′51.0″E | 20 |
6 | Hluboká | 538 | 49°06′24.3″N | 14°29′51.6″E | 30 |
7 | Jeseník | 652 | 50°11′34.1″N | 17°13′55.0″E | 30 |
8 | Frýdek Místek | 839 | 49°31′44.7″N | 18°28′28.6″E | 30 |
9 | Luhačovice | 479 | 49°03′06.0″N | 18°04′19.0″E | 30 |
10 | Lanškroun | 573 | 49°56′07.4″N | 16°30′33.2″E | 30 |
SSR Locus | Allele Size Range (bp) | Primer Sequences 5′ –3′ | Repeats | Fluorescent Dye | Source Reference | Primers Volume F + R [μL] | ||
---|---|---|---|---|---|---|---|---|
F | R | |||||||
Multiplex 1 | concat14_A_0 | 170–197 | TGAAGAAATTCACAACCCAACA | GGGTTGTTTACGATGGTGGA | (TC)9 | PET | 0.6 | |
EMILY_A_0 | 142–152 | GACCCCAAGGTTACAGTGCT | CGTACAATTGCACCCACATC | (GA)11 | PET | 0.36 | ||
csolfagus_31 | 103–130 | TCTATTGACACAAGAATAAGAACACC | CTTGGCAAGAAAAGGGGATT | (AG)12 | PET | 0.45 | ||
mfc11 | 310–360 | ACAGATAAAAACAGAAGCCA | TTTGGTTTTGTTGAGTTTAG | (AG)10 | NED | 0.45 | ||
DE576_A_0 | 210–240 | TCTCCTTAGATCCACAATCACA | AGCTCTTCATTGCTCAGAACG | (CAA)10 | NED | 0.9 | ||
csolfagus_05 | 167–180 | GGTTTCTAGCAAAATTGGCATT | CCCAAAAGGCCCTACTACAA | (GA)10 | NED | 0.36 | ||
FS1-03 | 90–140 | CACAGCTTGACACATTCCAAC | TGGTAAAGCACTTTTTCCCACT | (GA)18 | NED | 0.24 | ||
mfc5 | 270–340 | ACTGGGACAAAAAAACAAAA | GAAGGACCAAGGCACATAAA | (AG)10 | FAM | 0.6 | ||
csolfagus_19 | 150–185 | TGCCCATGAGGTTTGTATCA | GCCGAATAACCCAGAAAACA | (TC)13 | FAM | 0.24 | ||
csolfagus_06 | 200–225 | GTTGTTGCTCACAGCAGTCG | ACGCTTGGTCTTCTTGCACT | (AG)13 | FAM | 0.24 | ||
sfc0036 | 90–140 | CATGCTTGACTGACTGTAAGTTC | TCCAGGCCTAAAAACATTTATAG | (TC)23 | FAM | 0.3 | ||
mfc7 | 110–104 | AAAATACACTGCCCCCAAAA | CAGGTTTTGGTTTCTTACAC | (GA)9 | VIC | 0.3 | ||
ERHBI_A_0 | 159–167 | TGCAACAACTTAGCACTTTGA | GCGTGTGGCTTATCCAAAAT | (AG)9 | VIC | 0.12 | ||
Multiplex 2 | EEU75_A_0 | 90–115 | TTCCAAACCAACCCTTTATCC | GACGGAGATTGAGGAAGAACA | (CT)10 | PET | 0.3 | |
Fagsyl_002929 | 152–210 | GCGGCGACTGGAATAATAGC | CAATCACACGCTGCACAAAC | (TTG)x | NED | 0.3 | ||
Fagsyl_003849 | 98–128 | GCTTCGTTCTTCGGCATCTC | AATAGCACAAATAGCCCGCC | (CT)x | NED | 0.21 | ||
DZ447_A_0 | 186–194 | GGTGCAATACTTCACTTTAGGACA | ATAGGAGTGGGACGGCTAGG | (TC)10 | FAM | 0.3 | ||
csolfagus_29 | 130–150 | CACAACCTGCATTCCCTTTC | GTTTGGCACTTTGGCTTGTT | (CT)11 | FAM | 0.18 | ||
Fagsyl_001018 | 107–130 | AATATCAGGGAGGCAGCACC | CGAGATGGACTTCTAAGTTTTATTTGC | (CA)x | FAM | 0.21 | ||
DUKCT_A_0 | 75–95 | GCCTCTCGCAGCTCCTATAA | GATCTAATGTGGGTTTGGTTTTG | (AC)14 | FAM | 0.18 | ||
Fagsyl_003093 | 150–205 | TCATCACCGAGACAAGGGAC | ATGGTGGTGTGGAAGCTAGG | (CA)x | VIC | 0.18 |