1. bookVolumen 69 (2020): Heft 1 (March 2020)
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2336-3207
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14 Jul 2011
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The influence of environmental factors on microbial community composition in a mountain river

Online veröffentlicht: 11 Oct 2020
Volumen & Heft: Volumen 69 (2020) - Heft 1 (March 2020)
Seitenbereich: 75 - 88
Zeitschriftendaten
License
Format
Zeitschrift
eISSN
2336-3207
Erstveröffentlichung
14 Jul 2011
Erscheinungsweise
3 Hefte pro Jahr
Sprachen
Englisch

Amann R.I., Ludwig W. & Schleifer K.-H. (1995): Phylogenetic identification and in situ detection of individual microbial cells without cultivation. – Microbiol. Rev. 59(1): 143-169.10.1128/mr.59.1.143-169.1995Search in Google Scholar

Beier S., Witzel K.-P. & Marxsen J. (2008): Bacterial community composition in central European running waters examined by temperature gradient gel electrophoresis and sequence analysis of 16S rRNA genes. – Appl. Environ. Microbiol. 74(1): 188-199.10.1128/AEM.00327-07Search in Google Scholar

Bomberg M., Montonen L., Münster U. & Jurgens G. (2008): Diversity and function of archaea in freshwater habitats. – Curr. Trends. Microbiol. 4: 61-89.Search in Google Scholar

Bouvier T. & del Giorgio P.A. (2003): Factors influencing the detection of bacterial cells using fluorescence in situ hybridization (FISH): A quantitative review of published reports. – FEMS Microbiol. Ecol. 44(1): 3-15.10.1016/S0168-6496(02)00461-0Search in Google Scholar

Braun B., Schröder J., Knecht H. & Szewzyk U. (2016): Unraveling the microbial community of a cold groundwater catchment system. – Wat. Res. 107: 113-126.Search in Google Scholar

Crump B.C. & Hobbie J.E. (2005): Synchrony and seasonality in bacterioplnkton communities of two temperate rivers. – Limnol. Oceanogr. 50(6): 1718-1729.10.4319/lo.2005.50.6.1718Search in Google Scholar

ČSN EN 14614. Water quality — Guidance standard for assessing the hydromorphological features of rivers. Czech Standards Institute, Prague, 2005.Search in Google Scholar

Dippong T., Mihalia C., Gogab F. & Cical E. (2017): Seasonal evolution and depth variability of heavy metal concentrations in the water of Firiza-Strîmtori Lake, NW of Romania. – Studia UBB Chemia 62: 213-228.10.24193/subbchem.2017.1.19Search in Google Scholar

Dippong T., Mihali C., Nâsui D., Berinde Z. & Butean C. (2018): Assessment of water physicochemical parameters in the Strîmtori-Firiza Reservoir in Northwest Romania. – Water Environ. Res. 90: 220-233.Search in Google Scholar

Dorigo U., Volatier L. & Humbert J.F. (2005): Molecular approaches to the assessment of biodiversity in aquatic microbial communities. – Wat. Res. 39(11): 2207-2218.10.1016/j.watres.2005.04.00715935436Search in Google Scholar

Farnleitner A.H., Wilhartitz I., Ryzinska G., Kirschner A.K.T., Stadler H., Burtscher M.M., Hornek R., Szewzyk U., Herndl G. & Mach R.L. (2005): Bacterial dynamics in spring water of alpine karst aquifers indicates the presence of stable autochthonous microbial endokarst communities. – Environ. Microbiol. 7(8): 1248-1259.10.1111/j.1462-2920.2005.00810.x16011762Search in Google Scholar

Felföldy L. (1976): Biological water quality. A new system for the biological qualification of water. – Res. Water Qual. and Water Technol. 3: 3-37.Search in Google Scholar

Glöckner F.O., Amann R., Alfreider A., Pernthaler J., Psenner R., Trebesius K. & Schleifer K.-H. (1996): An in situ hybridization protocol for detection and identification of planktonic bacteria. – Syst. Appl. Microbiol. 19: 403-406.Search in Google Scholar

Glöckner F.O., Zaichikov E., Belkova N., Denissova L., Pernthaler J., Pernthaler A. & Amann R. (2000): Comparative 16S rRNA analysis of lake bacterioplankton reveals globally distributed phylogenetic clusters including an abundant group of Actinobacteria. – Appl. Environ. Microbiol. 66(11): 5053-5065.10.1128/AEM.66.11.5053-5065.20009241911055963Search in Google Scholar

Hoshino T., Yilmaz L.S., Noguera D.R., Daims H. & Wagner M. (2008): Quantification of target molecules needed to detect microorganisms by fluorescence in situ hybridization (FISH) and catalyzed reporter deposition-FISH. – Appl. Environ. Microbiol. 74(16): 5068-5077.10.1128/AEM.00208-08251927518552182Search in Google Scholar

Hrabě S., Kubíček F., Obr S., Raušer J., Zelinka M. & Knoz J. (1958): Results of hydrobiological survey in water basin of planned water reservoir on the Morávka River. Zoological institute, Faculty of Science, Masaryk University, Brno, Czech Republic.Search in Google Scholar

Hu A., Yang X., Chen N., Hou L., Ma Y. & Yu Ch.-P. (2014): Response of bacterial communities to environmental changes in a mesoscale subtropical watershed, Southeast China. – Sci. Total. Environ. 472: 746-756.Search in Google Scholar

Ibekwe A.M., Ma J. & Murinda S.E. (2016): Bacterial community composition and structure in an Urban River impacted by different pollutant sources. – Sci. Total. Environ. 566-567: 1176-1185.10.1016/j.scitotenv.2016.05.16827267715Search in Google Scholar

Imhoff J.F. & Hiraishi A. (2006): Aerobic bacteria containing bacteriochlorophyll and belonging to the Alphaproteobacteria. In: Brenner D.J., Krieg N.R. & Staley J.T. (Eds): Bergey’s Manual of Systematic Bacteriology, 2nd edition, vol 2, part A. Springer, USA, pp. 133-136.Search in Google Scholar

Kenzaka T., Yamaguchi N., Tani K. & Nasu M. (1998): rRNA-targeted fluorescent in situ hybridization analysis of bacterial community structure in river water. – Microbiol. 144: 2085-2093.10.1099/00221287-144-8-2085Search in Google Scholar

Kepner R.L., Jr. & Pratt J.R. (1994): Use of fluorochromes for direct enumeration of total bacteria in environmental samples: past and present. – Microbiol. Rev. 58(4): 603-615.10.1128/mr.58.4.603-615.1994Search in Google Scholar

Kirchman D.L. (2002): The ecology of Cytophaga–Flavobacteria in aquatic environments. – FEMS Microbiol. Ecol. 39(2): 91-100.10.1016/S0168-6496(01)00206-9Search in Google Scholar

Legendre P. & Anderson M.J. (1999): Distance-based redundancy analysis: testing multispecies responses in multifactorial ecological experiments. – Ecol. Monogr. 69: 1-24.10.1890/0012-9615(1999)069[0001:DBRATM]2.0.CO;2Search in Google Scholar

Lew S., Lew M., Szarek J. & Babińska I. (2011): Seasonal patterns of thebacterioplankton community composition in a lake threatened by a pesticide disposal site. – Environ. Sci. Pollut. Res. 18: 376-385.Search in Google Scholar

Lew S., Glińska-Lewczuk K., Burandt P., Obolewski K., Goździejewska A., Lew M. & Dunalska J. (2016): Impact of environmental factors on bacterial communities in floodplain lakes differed by hydrological connectivity. – Limnologica 58: 20-29.10.1016/j.limno.2016.02.005Search in Google Scholar

Liao H., Yu K., Duan Y., Ning Z., Li B., He L. & Liu C. (2019): Profiling microbial communities in a watershed undergoing intensive anthropogenic activities. – Sci. Total Env. 647: 1137-1147.10.1016/j.scitotenv.2018.08.103Search in Google Scholar

Margesin R. & Miteva V. (2011): Diversity and ecology of psychrophilic microorganisms. – Res. Microbiol. 162(3): 346-61.10.1016/j.resmic.2010.12.004Search in Google Scholar

Mlejnková H. (2000): Occurrence of physiological groups of bacteria in river water and sediment. T. G. Masaryk Water Research Institute, Prague.Search in Google Scholar

Mlejnková H. & Sovová K. (2010): Impact of pollution and seasonal changes on microbial community structure in surface water. – Wat. Sci. Tech. 61(11): 2787-2795.10.2166/wst.2010.080Search in Google Scholar

Nakano A. & Ban S. (2003): Microbial communities in oligotrophic Lake Toya, Japan. – Limnology 4: 19-24.10.1007/s10201-002-0086-6Search in Google Scholar

Oksanen J., Blanchet F.G., Friendly M., Kindt R., Legendre P., McGlinn D., Minchin P.R., O’Hara R.B., Simpson G.L., Solymos P., Stevens M.H.H., Szoecs E. & Wagner H. (2018): Vegan: Community Ecology Package. R package version 2.4-6. https://CRAN.R-project.org/package=vegan.Search in Google Scholar

Pernthaler J., Glockner F. O., Unterholzner S., Alfreider A., Psenner R. & Amann R. (1998): Seasonal community and population dynamics of pelagic bacteria and archaea in a high mountain lake. – Appl. Environ. Microbiol. 64(11): 4299-306.10.1128/AEM.64.11.4299-4306.1998Search in Google Scholar

Pronk M., Goldscheider N. & Zopfi J. (2009): Microbial communities in karst groundwater and their potential use for biomonitoring. – Hydrogeol. J. 1: 37-48.Search in Google Scholar

Rasul M.G., Islam M.S., Yunus R.B.M., Mokhtar M.B., Alam L. & Yahaya F.M. (2017): Spatial and temporal variation of water quality in the Bertam catchment, Cameron Highlands, Malaysia. – Water Environ. Res. 89(12): 2088-2102.10.2175/106143017X1483999452274028087920Search in Google Scholar

Rumlová S. (2011): Longitudinal variability of the Morávka River style. Bachelor’s thesis, Faculty of Science, Masaryk University, Brno, Czech Republic.Search in Google Scholar

Sigee D.C. (2005): Freshwater microbiology. John Wiley and Sons, UK.10.1002/0470011254Search in Google Scholar

Straškraba M. [ed.] (1954): Proceedings of fauna and flora of the Lučina and Morávka Rivers with respect to building reservoirs. Faculty of Biology, Charles University, Prague, Czech Republic.Search in Google Scholar

Straškrábová V., Hartman P., Macek M., Nedoma J., Šimek K. & Vrba J. (1996): Microbial ecology of water. Ministry of the Environment of the Czech Republic, Prague, Czech Republic.Search in Google Scholar

Wang J., Soininen J., Zhang Y., Wang B., Yang X. & Shen J. (2011): Contrasting patterns in elevational diversity between microorganisms and macroorganisms. – J. Biogeogr. 38: 595-603.10.1111/j.1365-2699.2010.02423.xSearch in Google Scholar

Wang L., Zhang J., Li H., Yang H., Peng C., Peng Z. & Lu L. (2018): Shift in the microbial community composition of surface water and sediment along an urban river. – Sci. Total Env. 627: 600-612.10.1016/j.scitotenv.2018.01.20329426184Search in Google Scholar

Zhang Y., Chen L., Sun R., Dai T., Tian J., Zheng W. & Wen D. (2016): Temporal and spatial changes of microbial community in an industrial effluent receiving area in Hangzhou Bay. – J. Environ. Sci. 44: 57-68.Search in Google Scholar

Žáková Z. (1986): Criteria of trophic state evaluation, classification, maping. In: Lhotský O., Žáková Z. & Marvan P. [Eds]: Algae tests and their application, P VTS VÚV Brno, pp. 41-47.Search in Google Scholar

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