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Identification of upregulated genes in laminarin-treated poplar (Populus alba × P. tremula var. glandulosa) suspension cells by suppression subtractive hybridization and cDNA microarray


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ALMAGRO, L., R. L. V. GÓMEZ, S. BELCHI-NAVARRO, R. BRU, R. A. BARCELÓ and M. A. PEDREÑO (2009): Class III peroxidases in plant defence reactions. J. Exp. Bot. 60: 377-390.Search in Google Scholar

ARASIMOWICZ-JELONEK, M., A. KOSMALA, L. JANUS, D. ABRAMOWSKI and J. FLORYSZAK-WIECZOREK (2013): The proteome response of potato leaves to priming agents and S-nitrosoglutathione. Plant Sci. 198: 83-90. 10.1016/j.plantsci.2012.10.004Search in Google Scholar

AZIZ, A., A. GAUTHIER, A. BÉZIER, B. POINSSOT, J. M. JOUBERT, A. PUGIN, A. HEYRAUD and F. BAILLIEUL (2007): Elicitor and resistance-inducing activities of _-1,4 cellodextrins in grapevine, comparison with β-1,3 glucans and β-1,4 oligogalacturonides. J. Exp. Bot. 24: 1-10.10.1093/jxb/erm008Search in Google Scholar

BAEK, M. H., B. Y. CHUNG, J. H. KIM, J. S. KIM, S. S. LEE, B. C. AN, I. J. LEE and T. H. KIM (2008): cDNA cloning and expression pattern of cinnamate-4-hydroxylase in the Korean black raspberry. BMB Rep. 41: 529-536.10.5483/BMBRep.2008.41.7.529Search in Google Scholar

BAREL, G. and I. GINZBERG (2008): Potato skin proteome is enriched with plant defence components. J. Exp. Bot. 59: 3347-3357.Search in Google Scholar

BLUME, B., T. NÜRNBERGER, N. NASS and D. SCHEEL (2000): Receptor-mediated increase in cytoplasmic free calcium required for activation of pathogen defense in parsley. Plant Cell 12: 1425-1440.10.1105/tpc.12.8.1425Search in Google Scholar

BOLWELL, G. P., K. BOZAK and A. ZIMMERLIN (1994): Plant cytochrome P450. Phytochemistry 37: 1491-1506.10.1016/S0031-9422(00)89567-9Search in Google Scholar

CHEN, L., Y. ZHANG, Y. REN, J. XU, Z. ZHANG and Y. WANG (2012): Genome-wide identification of cold-responsive and new microRNAs in Populus tomentosa by highthroughput sequencing. Biochem. Biophys. Res. Commun. 417(2): 892-896.10.1016/j.bbrc.2011.12.07022209794Search in Google Scholar

COLL, N. S., P. EPPLE and J. L. DANGL (2011): Programmed cell death in the plant immune system. Cell Death Differ. 18(8): 1247-1256.10.1038/cdd.2011.37317209421475301Search in Google Scholar

DOKLÁDAL, L., M. OBOR˘ IL, K. STEJSKAL, Z. ZDRÁHAL, N. PTÁC˘KOVÁ, R. CHALOUPKOVÁ, J. DAMBORSKY´, T. KAS˘ PAROVSKY´, S. JEANDROZ, M. Z˘ D’ÁRSKÁ and J. LOCHMAN (2012): Physiological and proteomic approaches to evaluate the role of sterol binding in elicitin- induced resistance. J. Exp. Bot. 63(5): 2203-2215.10.1093/jxb/err427329540222223811Search in Google Scholar

GUTTIKONDA, S. K., J. TRUPTI, N. C. BISHT, H. CHEN, Y. C. AN, S. PANDEY, D. XU and O. YU (2010): Whole genome co-expression analysis of soybean cytochrome P450 genes identifies nodulation-specific P450 monooxygenases. BMC Plant Biol. 10: 243.10.1186/1471-2229-10-243309532521062474Search in Google Scholar

HAAPALAINEN, M., A. DAUPHIN, C. M. LI, G. BAILLY, D. TRAN, J. BRIAND, F. BOUTEAU and S. TAIRA (2012): HrpZ harpins from different Pseudomonas syringae pathovars differ in molecular interactions and in induction of anion channel responses in Arabidopsis thaliana suspension cells. Plant Physiol. Biochem. 51: 168-174.Search in Google Scholar

HEESE, A., D. R. HANN, S. GIMENEZ-IBANEZ, A. M. JONES, K. HE, J. LI, J. I. SCHROEDER, S. C. PECK and J. P. RATHJEN (2007): The receptor-like kinase SERK3/BAK1 is a central regulator of innate immunity in plants. Proc. Natl. Acad. Sci. U.S.A. 104: 12217-12222.Search in Google Scholar

JONES, J. T., M. MOENS, M. MOTA, H. LI and T. KIKUCHI (2008): Bursaphelenchus xylophilus: opportunities in comparative genomics and molecular host-parasite interactions. Mol. Plant Pathol. 9: 357-368.Search in Google Scholar

KIM, H. S., M. S. JUNG, S. M. LEE, K. E. KIM, H. BYUN, M. S. CHOI, H. C. PARK, M. J. CHO and W. S. CHUNG (2009): An S-locus receptor-like kinase plays a role as a negative regulator in plant defense responses. Biochem. Biophys. Res. Commun. 381: 424-428.Search in Google Scholar

KLARZYNSKI, O., B. PLESSE, J. M. JOUBER, J. C. YVIN, M. KOPP, B. KLOAREG and B. FRITIG (2000): Linear β-1,3-glucans are elicitors of defense responses in tobacco. Plant Physiol. 124: 1027-1037.10.1104/pp.124.3.10275920211080280Search in Google Scholar

KOREA FOREST SERVICE (2012): Statistical yearbook of forestry. Retrieved from http://www.forest.go.kr/newkfsweb/cop/bbs/selectBoardList.do?bbsId=BBSMSTR_1064&mn=KFS_04_06.Search in Google Scholar

LALLE, M., S. VISCONTI, M. MARRA, L. CAMONI, R. VELASCO and P. ADUCCI (2005): ZmMPK6, a novel maize MAP kinase that interacts with 14-3-3 proteins. Plant Mol. Biol. 59: 713-722.Search in Google Scholar

LEE, H., E. K. BAE, S. Y. PARK, A. SJÖDIN, J. S. LEE, E. W. NOH and S. JANSSON (2007): Growth-phase-dependent gene expression profiling of poplar (Populous alba × Populus tremula var. glandulosa) suspension cells. Physiol. Plantarum 131: 599-613.10.1111/j.1399-3054.2007.00987.x18251851Search in Google Scholar

LI, S. T., P. ZHANG, M. ZHANG, C. H. FU, C. F. ZHAO, Y. S. DONG, A. Y. GUO and L. J. YU (2012): Transcriptional profile of Taxus chinensis cells in response to methyl jasmonate. BMC Genomics 13: 295.10.1186/1471-2164-13-295341479522748077Search in Google Scholar

LIPPERT, D. N., S. G. RALPH, M. PHILLIPS, R. WHITE, D. SMITH, D. HARDIE, J. GERSHENZON, K. RITLAND, C. H. BORCHERS and J. BOHLMANN (2009): Quantitative iTRAQ proteome and comparative transcriptome analysis of elicitor-induced Norway spruce (Picea abies) cells reveals elements of calcium signaling in the early conifer defense response. Proteomics 9: 350-367.10.1002/pmic.20080025219105170Search in Google Scholar

MENGES, M., L. HENNIG, W. GRUISSEM, J. A. H. MURRAY (2003): Genome-wide expression in an Arabidopsis cell suspension. Plant Mol. Biol. 53: 423-442.Search in Google Scholar

MITTLER, R. and A. Y. CHEUNG (2004): Cell death in plant development and defense, in When cells die II: a comprehensive evaluation of apoptosis and programmed cell death, edited by R. A. LOCKSHIN and Z. ZAKERI, Wiley, New York.10.1002/0471476501.ch5Search in Google Scholar

PAUWELS, L. and A. GOOSSENS (2011): The JAZ Proteins: A Crucial Interface in the Jasmonate Signaling Cascade. Plant Cell 23(9): 3089-3100.10.1105/tpc.111.089300320344221963667Search in Google Scholar

PFAFFL, M. W. (2001): A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res. 29: 2002-2007.10.1093/nar/29.9.e455569511328886Search in Google Scholar

RAKWAL, R., G. YANG and S. KOMATSU (2004): Chitinase induced by jasmonic acid, methyl jasmonate, ethylene and protein phosphatase inhibitors in rice. Mol. Biol. Rep. 31: 113-119.Search in Google Scholar

RALPH, S., C. ODDY, D. COOPER, H. YUEH, S. JANCSIK, N. KOLOSOVA, R. N. PHILIPPE, D. AESCHLIMAN, R. WHITE, D. HUBER, C. E. RITLAND, F. BENOIT, T. RIGBY, A. NANTEL, Y. S. BUTTERFIELD, R. KIRKPATRICK, E. CHUN, J. LIU, D. PALMQUIST, B. WYNHOVEN, J. STOTT, G. YANG, S. BARBER, R. A. HOLT, A. SIDDIQUI, S. J. JONES, M. A. MARRA, B. E. ELLIS, C. J. DOUGLAS, K. RITLAND and J. BOHLMANN (2006): Genomics of hybrid poplar (Populus trichocarpa × deltoides) interacting with forest tent caterpillar (Malacosoma disstria): normalized and full-length cDNA libraries, expressed sequence tags, and a cDNA microarray for the study of insectinduced defences in poplar. Mol. Ecol. 15: 1275-1297.10.1111/j.1365-294X.2006.02824.x16626454Search in Google Scholar

ROBB, J., B. LEE and R. N. NAZAR (2007): Gene suppression in a tolerant tomato-vascular pathogen interaction. Planta 226: 299-309.10.1007/s00425-007-0482-617308929Search in Google Scholar

SCHMIDT, K., B. HEBERLE, J. KURRASCH, R. NEHLS and D. J. STAHL (2004): Suppression of phenylalanine ammonia lyase expression in sugar beet by the fungal pathogen Cercospora beticola is mediated at the core promoter of the gene. Plant Mol. Biol. 55: 835-852.10.1007/s11103-005-2141-2Search in Google Scholar

SELS, J., J. MATHYS, B. M. DE CONINCK, B. P. CAMMUE and M. F. DE BOLLE (2008): Plant pathogenesis-related (PR) proteins: a focus on PR peptides. Plant Physiol. Biochem. 46(11): 941-950.10.1016/j.plaphy.2008.06.01118674922Search in Google Scholar

SPOEL, S. H. and X. DONG (2012): How do plants achieve immunity? Defence without specialized immune cells. Nat. Rev. Immunol. 12(2): 89-100.10.1038/nri314122273771Search in Google Scholar

WANG, J., S. ANDERSSON-GUNNERÅS, I. GABOREANU, M. HERTZ BERG, M. R. TUCKER, B. ZHENG, J. LES´NIEWSKA, E. J. MELLEROWICZ, T. LAUX, G. SANDBERG and B. JONES (2011): Reduced expression of the SHORT-ROOT gene increases the rates of growth and development in hybrid poplar and Arabidopsis. PLoS One 6(12): e28878.10.1371/journal.pone.0028878323756222194939Search in Google Scholar

YUAN, K., B. ZHANG, Y. ZHANG, Q. CHENG, M. WANG and M. HUANG (2008): Identification of differentially expressed proteins in poplar leaves induced by Marssonina brunnea f. sp. Multigermtubi. J. Genet. Genomics 35: 49-60.Search in Google Scholar

ZAWASKI, C., C. MA, S. H. STRAUSS, D. FRENCH, R. MEILANand V. B. BUSOV (2012): PHOTOPERIOD RESPONSE 1 (PHOR1)-like genes regulate shoot/root growth, starch accumulation, and wood formation in Populus. J. Exp. Bot. 63(15): 5623-5634.10.1093/jxb/ers217344427722915748Search in Google Scholar

eISSN:
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Sprache:
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Fachgebiete der Zeitschrift:
Biologie, Molekularbiologie, Genetik, Biotechnologie, Botanik