Cross-Species Amplification of Coconut Microsatellite Markers in Rattans

ALDRICH, P. R., M. JAGTAP, C. H. MICHLER and J. ROMEROSEVERSON (2003): Amplification of north American red oak microsatellite markers in European white oaks and Chinese chestnut. Silvae Genet 52: 176-179.Search in Google Scholar

BASU, S. K. (1985): The present status of rattan palms in India - An overview. In: Proceedings of the Rattan Seminar, Edited by WANG and MANOKARAN, Kuala Lumpur, Malaysia, pp. 77-94.Search in Google Scholar

CIPRIANI, G., G. LOT, W. G. HUANG, M. T. MARRAZZO, E. PETERLUNGER and R. TESTLIN (1999): AC/GT and AG/CT microsatellite repeats in peach (Prunus persica (L) Batsch): Isolation, characterization and crossspecies amplification in Prunus. Theor. Appl. Genet. 99: 65-72.10.1007/s001220051209Open DOISearch in Google Scholar

CLAUSS, M. J., H. COBBAN and T. MITCHELL-OLDS (2002): Cross-species microsatellite markers for elucidating population genetic structure in Arabidopsis and Arabis (Brassicaeae). Mol. Ecol. 11: 591-601.10.1046/j.0962-1083.2002.01465.x11918792Open DOISearch in Google Scholar

DOYLE, J. J. and J. S. DOYLE (1987): A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem. Bull. 19: 11-15.Search in Google Scholar

DRANSFIELD, J. (1996): The rattan taxonomy and ecology. In: Proceedings of Training Courses Cum Workshop, Rattan: Taxonomy, Ecology, Silviculture, Conservation, Genetic Improvement and Biotechnology, Edited by RAO, A. N. and RAMANATHA RAO, V. IPGRI-APO and INBAR, Sarawak, p. 114.Search in Google Scholar

JONES, R. C., J. MCNALLY and M. ROSSETTO (2002): Isolation of microsatellite loci from a rainforest tree Elaeocarpus grandis (Elaeocarpaceae), and amplification across closely related taxa. Mol. Ecol. Notes 2: 179-181.10.1046/j.1471-8286.2002.00202.xOpen DOISearch in Google Scholar

KARHU, A., J. H. DIETRICH and O. SAVOLAINEN (2000): Rapid extraction of microsatellite sequences in pines. Mol. Biol. Evol. 17: 259-265.10.1093/oxfordjournals.molbev.a02630510677848Open DOISearch in Google Scholar

LAKSHMANA, A. C. (1995): Rattans of South India. Evergreen Publishers, Bangalore, India, pp. 1-179.Search in Google Scholar

LYNGDOH, N., S. H. SANTOSH, B. T. RAMESHA, M. NAGESWARA RAO, G. RAVIKANTH, B. NARAYANI, K. N. GANESHAIAH and R. UMA SHAANKER (2005): Rattan species richness and population genetic structure of Calamus flagellum in North-Eastern Himalaya, India. J. Bamboo Rattan 4: 293-307.10.1163/156915905774310016Search in Google Scholar

NIXON, (2000): WinClada. Version 1.00.08. Published by the author, Ithaca, NY.Search in Google Scholar

PEAKALL, R., S. GILMORE, W. KEYS, M. MORGANTE and A. RAFALSKI (1998): Cross-species amplification of soyabean (Glycine max) simple sequence repeats (SSRs) within the genus and other legume genera, implications for the transferability of SSRs in plants. Mol. Biol. Evol. 15: 1275-1287.10.1093/oxfordjournals.molbev.a0258569787434Open DOISearch in Google Scholar

RAO, A. N. and R.V. RAO (1998): Priority Species of Bamboo and Rattan. IPGRI-APO, Serdang, Malaysia.Search in Google Scholar

RAVIKANTH, G., K. N. GANESHAIAH and R. UMA SHAANKER (2001): Mapping genetic diversity of rattans in the central Western Ghats: Identification of hot-spots of variability for in-situ conservation. In: UMA SHAANKER, R., GANESHAIAH, K. N. and BAWA, K. S. (Eds). Forest genetic resources: Status, threats and conservation strategies. Oxford Publications, New Delhi, India, pp. 69-83.Search in Google Scholar

RENUKA, C. (2001): Palms of India: status, threats and conservation strategies. In: UMA SHAANKER, R., GANESHAIAH, K. N. and BAWA, K. S. (Eds). Forest genetic resources: Status, threats and conservation strategies. Oxford Publications, New Delhi, India, pp. 197-209.Search in Google Scholar

ROA, A. C., P. CHAVARRIAGA-AGUIRRE, M. C. DUQUE, M. M. MAYA, M. W. BONIERBALE, C. IGLESIAS and J. TOHME (2000): Cross-species amplification of cassava (Manihot esculenta) Euphorbiaceae microsatellites: allelic polymorphism and degree of relationships. Amer. J. Bot. 87: 1647-1655.10.2307/2656741Search in Google Scholar

ROSSETTO, M. (2001): Sourcing of SSR markers from related plant species. In: HENRY, R. J. (Ed). Plant genotyping: the DNA fingerprinting of plants. CAB international, Oxford, pp. 210-224.10.1079/9780851995151.0211Search in Google Scholar

SCOTT, I. A. W., C. M. J. HAYES, S. KOEGH and S. F. MORRISON (2001): Isolation and characterization of novel microsatellite markers from the Australian water skin Eulamprus kosciuskoi and cross-species amplification in other members of the species-group. Mol. Ecol. Notes 1: 28-30.Search in Google Scholar

SNEATH, P. H. A. and R. R. SOKAL (1973): Numerical taxonomy. San Francisco, Freeman.Search in Google Scholar

STATSOFT (1993): Statistica ver 4.5. Statsoft, Inc., USA. SUN, H. S. and B. W. KIRKPATRIC (1996): Exploiting dinucleotide microsatellites conserved among mammalian species. Mamm. Gen. 7: 128-132.Search in Google Scholar

TEULAT, B., C. ALDAM, R. TREHIN, P. LEBRUN, J. H. A. BARKER, G. M. ARNOLD, A. KARP, L. BAUDOUIN and F. ROGNON (2000): An analysis of genetic diversity in coconut (Cocos nucifera) populations from across the geographic range using sequence tagged microsatellites (SSRs) and AFLPs. Theor. Appl. Genet. 100: 764-771.10.1007/s001220051350Open DOISearch in Google Scholar

TURPEINEN, T., T. TENHOLA, O. MANNINEN, E. NEVO and E. NISSILA (2001): Microsatellite diversity associated with ecological factors in Hordeum spontaneum populations in Israel. Mol. Ecol. 10: 1577-1591.Search in Google Scholar

YASODHA, R., M. GHOSH, R. SUMATHI and K. GURUMURTHY (2005): Cross-species amplification of eucalyptus SSR markers in Casuarinaceae. Acta. Bot. Croat. 64: 115-120.Search in Google Scholar

YEH, F. C., R. C. YANG and T. BOYLE (1999): POPGENE, Version 1.31. CIFOR and Univ. of Alberta, Edmonton, Alberta, Canada.Search in Google Scholar

WICKNESWARI, R. and T. J. BOYLE (2000): Effects of logging and other forms of harvesting on genetic diversity in humid tropical forests. In: YOUNG, A., BOSHIER, D. and BOYLE, T. (Eds). Forest Conservation and Genetics - Principles and Practice. CSIRO Publishing, Australia, pp. 115-122.Search in Google Scholar

WILLIAMSON, J. E., R. M. HUEBINGER, J. A. SOMMER, E. E. LOUIS, JR. and R. C. BARBER (2002): Development and cross-species amplification of 18 microsatellite markers in the Sumatran tiger (Panthers tigris sumatrae). Mol. Ecol. Notes 2: 110-112.10.1046/j.1471-8286.2002.00163.xOpen DOISearch in Google Scholar

ZUCCHI, M. I., R. P. V. BRONDANI, J. B. PINHEIRO, C. BRONDANI and R. VENCOVSKY (2002): Transferability of microsatellite markers from Eucalyptus spp. to Eugenia dystenterica (Myrtaceae family). Mol. Ecol. Notes 2: 512.10.1046/j.1471-8286.2002.00297.xOpen DOISearch in Google Scholar