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Modeling and Analysis of Root Branching Plasticity Based on Parrondo's Game


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Figure 1

Schema of rhizomers based on development window (dw)
Schema of rhizomers based on development window (dw)

Figure 2

Structure of Parrondo's game of rhizomers
Structure of Parrondo's game of rhizomers

Figure 3

Probability density distributions of eight samples to illustrate best fit of the model according to the mean-squared error. Solid lines are simulated distributions, and dashed lines are observed distributions
Probability density distributions of eight samples to illustrate best fit of the model according to the mean-squared error. Solid lines are simulated distributions, and dashed lines are observed distributions

Figure 4

Mean-squared errors of eight samples between simulated distributions and the empirical IbD distributions
Mean-squared errors of eight samples between simulated distributions and the empirical IbD distributions

Figure 5

Mean-squared errors of DaGlN (A) and AnOdPC (B) with different p1 and p2
Mean-squared errors of DaGlN (A) and AnOdPC (B) with different p1 and p2

List of considered samples, with the name of the species, the family, the site of observation, the abbreviation, and parameters values for elongation of each species

Species Family Site Sample abbreviation EL GDs Dmin IbD
Anthoxanthum odoratum Poaceae Pot Clermont-Ferrand AnOdPC 18.8(2.4) 774 0.07 1.43(0.072)
Anthoxanthum odoratum Poaceae Nozeyrolles AnOdN 18.8(2.4) 774 0.07 1.43(0.072)
Arrhenatherum elatius Poaceae Pot Clermont-Ferrand ArElPC 17.6(1.2) 302 0.098 3.78(0.070)
Dactylis glomerata Poaceae Nozeyrolles DaGlN 14.7(1.3) 803 0.075 2.43(0.071)
Lolium perenne Poaceae Thouzon LoPeT 16.6(1.7) 1533 0.058 2.44(0.069)
Poa trivialis Poaceae Pot Clermont-Ferrand PoTrPC 25.8(1.1) 1407 0.051 1.09(0.067)
Poa trivialis Poaceae Thouzon PoTrT 25.8(1.1) 1407 0.051 1.09(0.067)
Zea mays Poaceae Pot Avignon ZeMaPC 51 50 0.14 2

Parameters for Parrondo's game

Name Description Unit Value
p10 maximum winning probability of branch 1 - 0.75
P20 maximum winning probability of branch 2 - 0.1
Rthr capital threshold of rhizomer - 5
RAgemax growth duration of rhizomer day 5
K K-nearest neighbor - 2
ɛ biases - 0.005
EL slope of potential elongation rate versus diameter mm·mm−1·day−1 according to species
GDs growth duration parameter day·mm−2 according to species
Dmin minimum threshold diameter below which there is no possible elongation mm according to species
eISSN:
2353-3978
Language:
English
Publication timeframe:
2 times per year
Journal Subjects:
Life Sciences, Biotechnology, Plant Science, Ecology, other