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Molecular and morphological characterization of the amaryllis lesion nematode, Pratylenchus hippeastri (Inserra et al., 2007), from California


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Darriba, D., Taboada, G., Doallo, R. and Posada, D. 2012. jModelTest 2: more models, new heuristics and parallel computing. Nature Methods 9:772. Darriba D. Taboada G. Doallo R. and Posada D. 2012 . jModelTest 2: more models, new heuristics and parallel computing . Nature Methods 9 : 772 . 10.1038/nmeth.2109459475622847109 Search in Google Scholar

De Ley, P., Tandingan De Ley, I., Morris, K., Abebe, E., Mundo-Ocampo, M., Yoder, M., Heras, J., Waumann, D., Rocha-Olivares, A., Burr, A. H. J., Baldwin, J. G. and Thomas, W. K. 2005. An integrated approach to fast and informative morphological vouchering of nematodes for applications in molecular barcoding. Philosophical Transactions of the Royal Society B 360:1945–1958. De Ley P. Tandingan De Ley I. Morris K. Abebe E. Mundo-Ocampo M. Yoder M. Heras J. Waumann D. Rocha-Olivares A. Burr A. H. J. Baldwin J. G. and Thomas W. K. 2005 . An integrated approach to fast and informative morphological vouchering of nematodes for applications in molecular barcoding . Philosophical Transactions of the Royal Society B 360 : 1945 1958 . 10.1098/rstb.2005.1726160921716214752 Search in Google Scholar

DeLuca, F., Troccoli, A., Duncan, L. W., Subbotin, S. A., Waeyenberge, L., Moens, M. and Inserra, R. N. 2010. Characterisation of a population of Pratylenchus hippeastri from bromeliads and description of two related new species, P. floridensis n. sp. and P. parafloridensis n. sp., from grasses in Florida. Nematology 12:847–868. DeLuca F. Troccoli A. Duncan L. W. Subbotin S. A. Waeyenberge L. Moens M. and Inserra R. N. 2010 . Characterisation of a population of Pratylenchus hippeastri from bromeliads and description of two related new species, P. floridensis n. sp. and P. parafloridensis n. sp., from grasses in Florida . Nematology 12 : 847 868 . 10.1163/138855410X495809 Search in Google Scholar

Derycke, S., Remerie, T., Vierstraete, A., Backeljau, T., Vanfleteren, J., Vincx, M. and Moens, T. 2005. Mitochondrial DNA variation and cryptic speciation within the free-living marine nematode Pellioditis marina. Marine Ecology-Progress Series 300:91–103. Derycke S. Remerie T. Vierstraete A. Backeljau T. Vanfleteren J. Vincx M. and Moens T. 2005 . Mitochondrial DNA variation and cryptic speciation within the free-living marine nematode Pellioditis marina . Marine Ecology-Progress Series 300 : 91 103 . 10.3354/meps300091 Search in Google Scholar

Geraert, E. 2013. The Pratylenchidae of the World: Identification of the Family Pratylenchidae (Nematoda: Tylenchida) Academia Press, Gent, 430pp. Geraert E. 2013 . The Pratylenchidae of the World: Identification of the Family Pratylenchidae (Nematoda: Tylenchida) Academia Press , Gent , 430pp . Search in Google Scholar

Golden, A. M. 1990. “Preparation and mounting nematodes for microscopic observations”, in Zuckerman, B. M., Mai, W. F. and Krusberg, L. R. (Eds), Plant Nematology Laboratory Manual University of Massachusetts Agricultural Experiment Station, Amherst, MA 197–205. Golden A. M. 1990 . “ Preparation and mounting nematodes for microscopic observations ”, in Zuckerman B. M. Mai W. F. and Krusberg L. R. (Eds) , Plant Nematology Laboratory Manual University of Massachusetts Agricultural Experiment Station , Amherst, MA 197 205 . Search in Google Scholar

Gozel, U., Duncan, L., Inserra, R., Bernard, E., Dunn, D. and Troccoli, A. 2007. Pratylenchus hippeastri n. sp. (Nematoda: Pratylenchidae) from amaryllis in Florida with notes on P. scribneri and P. hexincisus. Nematology 9:25–42. Gozel U. Duncan L. Inserra R. Bernard E. Dunn D. and Troccoli A. 2007 . Pratylenchus hippeastri n. sp. (Nematoda: Pratylenchidae) from amaryllis in Florida with notes on P. scribneri and P. hexincisus . Nematology 9 : 25 42 . 10.1163/156854107779969754 Search in Google Scholar

Hooper, D. J. 1970. Handling, fixing, staining and mounting nematodes. Technical Bulletin. Ministry of Agriculture, Fisheries and Food, (5th ed., 2), 39–54. Hooper D. J. 1970 . Handling, fixing, staining and mounting nematodes. Technical Bulletin. Ministry of Agriculture , Fisheries and Food , (5th ed. , 2 ), 39 54 . Search in Google Scholar

Howland, A. D., Schreiner, R. P. and Zasada, I. A. 2014. Spatial distribution of plant-parasitic nematodes in semi-arid Vitis vinifera vineyards in Washington. Journal of Nematology 46:321. Howland A. D. Schreiner R. P. and Zasada I. A. 2014 . Spatial distribution of plant-parasitic nematodes in semi-arid Vitis vinifera vineyards in Washington . Journal of Nematology 46 : 321 . Search in Google Scholar

Huelsenbeck, J. P. and Ronquist, F. 2001. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17:754–755. Huelsenbeck J. P. and Ronquist F. 2001 . MRBAYES: Bayesian inference of phylogenetic trees . Bioinformatics 17 : 754 755 . 10.1093/bioinformatics/17.8.75411524383 Search in Google Scholar

Inserra, R. N., Troccoli, A., Gozel, U., Bernard, E. C., Dunn, D. and Duncan, L. 2007. Pratylenchus hippeastri n. sp. (Nematoda: Pratylenchidae) from amaryllis in Florida with notes on P. scribneri and P. hexincisus. Nematology 9:25–52. Inserra R. N. Troccoli A. Gozel U. Bernard E. C. Dunn D. and Duncan L. 2007 . Pratylenchus hippeastri n. sp. (Nematoda: Pratylenchidae) from amaryllis in Florida with notes on P. scribneri and P. hexincisus . Nematology 9 : 25 52 . 10.1163/156854107779969754 Search in Google Scholar

Knoetze, R., van den Berg, E., Girgan, C. and van der Walt, L. 2019. First report of the root lesion nematode, Pratylenchus hippeastri, on apple in South Africa. Journal of Plant Diseases and Protection 126:607–609. Knoetze R. van den Berg E. Girgan C. and van der Walt L. 2019 . First report of the root lesion nematode, Pratylenchus hippeastri, on apple in South Africa . Journal of Plant Diseases and Protection 126 : 607 609 . 10.1007/s41348-019-00259-z Search in Google Scholar

Miller, M. A., Pfeiffer, W. and Schwartz, T. 2010. Creating the CIPRES Science Gateway for inference of large phylogenetic trees. Proceedings of the Gateway Computing Environments Workshop (GCE), New Orleans, November 14, LA, 1–8. Miller M. A. Pfeiffer W. and Schwartz T. 2010 . Creating the CIPRES Science Gateway for inference of large phylogenetic trees . Proceedings of the Gateway Computing Environments Workshop (GCE) , New Orleans, November 14, LA , 1 8 . Search in Google Scholar

Ozbayrak, M., Todd, T., Harris, T., Higgins, R., Powers, K., Mullin, P., Sutton, L. and Powers, T. 2019. A COI DNA barcoding survey of Pratylenchus species in the Great Plains Region of North America. Journal of Nematology 51:1–21. Ozbayrak M. Todd T. Harris T. Higgins R. Powers K. Mullin P. Sutton L. and Powers T. 2019 . A COI DNA barcoding survey of Pratylenchus species in the Great Plains Region of North America . Journal of Nematology 51 : 1 21 . 10.21307/jofnem-2019-081 Search in Google Scholar

Qing, X., Bert, W., Gamliel, A., Bucki, P., Duvrinin, S., Alon, T. and Braun Miyara, S. 2019. Phylogeography and molecular species delimitation of Pratylenchus capsici n. sp., a new root lesion nematode in Israel on pepper (Capsicum annuum). Phytopathology 109:847–58. Qing X. Bert W. Gamliel A. Bucki P. Duvrinin S. Alon T. and Braun Miyara S. 2019 . Phylogeography and molecular species delimitation of Pratylenchus capsici n. sp., a new root lesion nematode in Israel on pepper (Capsicum annuum) . Phytopathology 109 : 847 58 . 10.1094/PHYTO-09-18-0324-R30422745 Search in Google Scholar

Shokoohi, E. 2019. New data on known species of Hirschmanniella and Pratylenchus (Rhabditida, Pratylenchidae) from Iran and South Africa. Journal of Nematology 51:1–26. Shokoohi E. 2019 . New data on known species of Hirschmanniella and Pratylenchus (Rhabditida, Pratylenchidae) from Iran and South Africa . Journal of Nematology 51 : 1 26 . 10.21307/jofnem-2019-074 Search in Google Scholar

Skantar, A. M., Handoo, Z. A., Zanakis, G. N. and Tzortzakakis, E. A. 2012. Molecular and morphological characterization of the corn cyst nematode, Heterodera zeae, from Greece. Journal of Nematology 44:58–66. Skantar A. M. Handoo Z. A. Zanakis G. N. and Tzortzakakis E. A. 2012 . Molecular and morphological characterization of the corn cyst nematode, Heterodera zeae, from Greece . Journal of Nematology 44 : 58 66 . Search in Google Scholar

Subbotin, S. A., Ragsdale, E. J., Mullens, T., Roberts, P. A., Mundo-Ocampo, M. and Baldwin, J. G., 2008. A phylogenetic framework for root lesion nematodes of the genus Pratylenchus (Nematoda): Evidence from 18S and D2–D3 expansion segments of 28S ribosomal RNA genes and morphological characters. Molecular Phylogenetics and Evolution 48:491–505. Subbotin S. A. Ragsdale E. J. Mullens T. Roberts P. A. Mundo-Ocampo M. and Baldwin J. G., 2008 . A phylogenetic framework for root lesion nematodes of the genus Pratylenchus (Nematoda): Evidence from 18S and D2–D3 expansion segments of 28S ribosomal RNA genes and morphological characters . Molecular Phylogenetics and Evolution 48 : 491 505 . 10.1016/j.ympev.2008.04.02818514550 Search in Google Scholar

Téliz, D., Landa, B. B., Rapoport, H. F., Camacho, F. P., Jiménez-Díaz, R. M. and Castillo, P. 2007. Plant-parasitic nematodes infecting grapevine in southern Spain and susceptible reaction to root-knot nematodes of rootstocks reported as moderately resistant. Plant Disease 91:1147–1154. Téliz D. Landa B. B. Rapoport H. F. Camacho F. P. Jiménez-Díaz R. M. and Castillo P. 2007 . Plant-parasitic nematodes infecting grapevine in southern Spain and susceptible reaction to root-knot nematodes of rootstocks reported as moderately resistant . Plant Disease 91 : 1147 1154 . 10.1094/PDIS-91-9-114730780656 Search in Google Scholar

Torregrosa, L., Vialet, S., Adivèze, A., Iocco-Corena, P. and Thomas, M. R. 2015. “Grapevine (Vitis vinifera L.)”, in Wang, K. (Ed.), Agrobacterium Protocols Springer, New York, NY, 177–194. Torregrosa L. Vialet S. Adivèze A. Iocco-Corena P. and Thomas M. R. 2015 . “ Grapevine (Vitis vinifera L.) ”, in Wang K. (Ed.) , Agrobacterium Protocols Springer , New York, NY , 177 194 . Search in Google Scholar

USDA, National Agricultural Statistics Service (2019), California Field Office. Grape reports, available at: https://www.nass.usda.gov/Statistics_by_State/California/Publications/Specialty_and_Other_Releases/Grapes/Acreage/2019/201904grpacSUMMARY2018Crop.pdf (accessed March 27, 2020). Search in Google Scholar

Wang, H. H., Zhuo, K. and Liao, J. L. 2016. Morphological and molecular characterization of Pratylenchus hippeastri, a new record of root lesion nematode associated with apple in China. Pakistan Journal of Zoology 48:665–671. Wang H. H. Zhuo K. and Liao J. L. 2016 . Morphological and molecular characterization of Pratylenchus hippeastri, a new record of root lesion nematode associated with apple in China . Pakistan Journal of Zoology 48 : 665 671 . Search in Google Scholar

Ye, W., Giblin-Davis, R. M., Davies, K. A., Purcell, M. F., Scheffer, S. J., Taylor, G. S., Center, T. D., Morris, K. and Thomas, W. K. 2007. Molecular phylogenetics and the evolution of host plant associations in the nematode genus Fergusobia (Tylenchida: Fergusobiinae). Molecular Phylogenetics and Evolution 45:123–141. Ye W. Giblin-Davis R. M. Davies K. A. Purcell M. F. Scheffer S. J. Taylor G. S. Center T. D. Morris K. and Thomas W. K. 2007 . Molecular phylogenetics and the evolution of host plant associations in the nematode genus Fergusobia (Tylenchida: Fergusobiinae) . Molecular Phylogenetics and Evolution 45 : 123 141 . 10.1016/j.ympev.2007.02.02717434761 Search in Google Scholar

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