Endophytic Bacteria In The Phytodegradation Of Persistent Organic Pollutants

1. Afzal M., Khan Q.M., Sessitsch A.: Endophytic bacteria: prospects and applications for the phytoremediation of organic pollutants. Chemosphere, 117, 232–242 (2014) Afzal M. Khan Q.M. Sessitsch A. Endophytic bacteria: prospects and applications for the phytoremediation of organic pollutants Chemosphere 117 232 242 201410.1016/j.chemosphere.2014.06.07825078615 Search in Google Scholar

2. Afzal M., Shabir G., Tahseen R., Ejazul I., Iqbal S., Khan Q.M.: Endophytic Burkholderia sp. strain PsJN improves plant growth and phytoremediation of soil irrigated with textile effluent. Clean Soil Air Water, 42, 1304–1310 (2014) Afzal M. Shabir G. Tahseen R. Ejazul I. Iqbal S. Khan Q.M. Endophytic Burkholderia sp. strain PsJN improves plant growth and phytoremediation of soil irrigated with textile effluent Clean Soil Air Water 42 1304 1310 201410.1002/clen.201300006 Search in Google Scholar

3. Andreolli M., Lampis S., Poli M., Gullner G., Biró B., Vallini G.: Endophytic Burkholderia fungorum DBT1 can improve phytoremediation efficiency of polycyclic aromatic hydrocarbons. Chemosphere, 92, 688–694 (2013) Andreolli M. Lampis S. Poli M. Gullner G. Biró B. Vallini G. Endophytic Burkholderia fungorum DBT1 can improve phytoremediation efficiency of polycyclic aromatic hydrocarbons Chemosphere 92 688 694 201310.1016/j.chemosphere.2013.04.03323706896 Search in Google Scholar

4. Andria V., Reichenauer T.G., Sessitsch A.: Expression of alkane monooxygenase (alkB) genes by plant-associated bacteria in the rhizosphere and endosphere of Italian ryegrass (Lolium multiflorum L.) grown in diesel contaminated soil. Environ. Pollut. 157, 3347–3350 (2009) Andria V. Reichenauer T.G. Sessitsch A. Expression of alkane monooxygenase (alkB) genes by plant-associated bacteria in the rhizosphere and endosphere of Italian ryegrass (Lolium multiflorum L.) grown in diesel contaminated soil Environ. Pollut 157 3347 3350 200910.1016/j.envpol.2009.08.02319773105 Search in Google Scholar

5. Arslan M., Imran A., Khan Q.M., Afzal M.: Plant-bacteria partnerships for the remediation of persistent organic pollutants. Environ. Sci. Pollut. Res. 1–15 (2015) Arslan M. Imran A. Khan Q.M. Afzal M. Plant-bacteria partnerships for the remediation of persistent organic pollutants Environ. Sci. Pollut. Res 1 15 201510.1007/s11356-015-4935-326139403 Search in Google Scholar

6. Barac T., Taghavi S., Borremans B., Provoost A., Oeyen L., Colpaert J.V., Vangronsveld J., van der Lelie D.: Engineered endophytic bacteria improve phytoremediation of water-soluble, volatile, organic pollutants. Nat. Biotechnol. 22, 583–588 (2004) Barac T. Taghavi S. Borremans B. Provoost A. Oeyen L. Colpaert J.V. Vangronsveld J. van der Lelie D. Engineered endophytic bacteria improve phytoremediation of water-soluble, volatile, organic pollutants Nat. Biotechnol. 22 583 588 200410.1038/nbt96015077119 Search in Google Scholar

7. Bisht S., Pandey P., Kaur G., Aggarwal H., Sood A., Sharma S., Kumar V., Bisht N.S.: Utilization of endophytic strain Bacillus sp. SBER3 for biodegradation of polyaromatic hydrocarbons (PAH) in soil model system. Eur. J. Soil. Biol. 60, 67–76 (2014) Bisht S. Pandey P. Kaur G. Aggarwal H. Sood A. Sharma S. Kumar V. Bisht N.S. Utilization of endophytic strain Bacillus sp. SBER3 for biodegradation of polyaromatic hydrocarbons (PAH) in soil model system Eur. J. Soil. Biol. 60 67 76 201410.1016/j.ejsobi.2013.10.009 Search in Google Scholar

8. Chen P., Pickard M., Gray M.: Surfactant inhibition of bacterial growth on solid anthracene. Biodegradation, 11, 341–347 (2000) Chen P. Pickard M. Gray M. Surfactant inhibition of bacterial growth on solid anthracene Biodegradation 11 341 347 200010.1023/A:1011160004678 Search in Google Scholar

9. Dashti N., Khanafer M., El-Nemr I., Sorkhoh N., Ali N., Radwan S.: The potential of oil utilizing bacterial consortia associated with legume root nodules for cleaning oily soils. Chemosphere, 74, 1354–1359 (2009) Dashti N. Khanafer M. El-Nemr I. Sorkhoh N. Ali N. Radwan S. The potential of oil utilizing bacterial consortia associated with legume root nodules for cleaning oily soils Chemosphere 74 1354 1359 200910.1016/j.chemosphere.2008.11.02819103456 Search in Google Scholar

10. Doty S.L.: Enhancing phytoremediation through the use of transgenics and endophytes. New Phytol. 179, 318–333 (2008) Doty S.L. Enhancing phytoremediation through the use of transgenics and endophytes New Phytol 179 318 333 200810.1111/j.1469-8137.2008.02446.x19086174 Search in Google Scholar

11. Feng F., Ge J., Li Y., Cheng J., Zhong J., Yu X.: Isolation, colonization, and chlorpyrifos degradation mediation of the endophytic bacterium Sphingomonas strain HJY in chinese chives (Allium tuberosum). J. Agric. Food Chem. 65, 1131–1138 (2017) Feng F. Ge J. Li Y. Cheng J. Zhong J. Yu X. Isolation, colonization, and chlorpyrifos degradation mediation of the endophytic bacterium Sphingomonas strain HJY in chinese chives (Allium tuberosum) J. Agric. Food Chem 65 1131 1138 201710.1021/acs.jafc.6b0528328103027 Search in Google Scholar

12. Feng N.X., Yu J., Zhao H.M., Cheng Y.T., Mo C.H., Cai Q.Y., Li Y.W., Li H., Wong M.H.: Efficient phytoremediation of organic contaminants in soils using plant-endophyte partnerships. Sci. Total Environ. 583, 352–368 (2017) Feng N.X. Yu J. Zhao H.M. Cheng Y.T. Mo C.H. Cai Q.Y. Li Y.W. Li H. Wong M.H. Efficient phytoremediation of organic contaminants in soils using plant-endophyte partnerships Sci. Total Environ. 583 352 368 201710.1016/j.scitotenv.2017.01.07528117167 Search in Google Scholar

13. Ferreira A., Quecine M.C., Lacava P.T., Oda S., Arau W.L.: Diversity of endophytic bacteria from Eucalyptus species seeds and colonization of seedlings by Pantoea agglomerans. FEMS Microbiol. Lett. 287, 8–14 (2008). Ferreira A. Quecine M.C. Lacava P.T. Oda S. Arau W.L. Diversity of endophytic bacteria from Eucalyptus species seeds and colonization of seedlings by Pantoea agglomerans FEMS Microbiol. Lett 287 8 14 200810.1111/j.1574-6968.2008.01258.x18710397 Search in Google Scholar

14. Gałązka A.: Zanieczyszczenia gleb substancjami ropopochodnymi z uwzględnieniem biologicznych metod ich uzdatniania. Kosmos, 64, 146–154 (2015) Gałązka A. Zanieczyszczenia gleb substancjami ropopochodnymi z uwzględnieniem biologicznych metod ich uzdatniania Kosmos 64 146 154 2015 Search in Google Scholar

15. Germaine K.J., Keogh E., Ryan D., Dowling D.N.: Bacterial endophyte mediated naphthalene phytoprotection and phytoremediation. FEMS Microbiol. Lett. 296, 226–234 (2009) Germaine K.J. Keogh E. Ryan D. Dowling D.N. Bacterial endophyte mediated naphthalene phytoprotection and phytoremediation FEMS Microbiol. Lett 296 226 234 200910.1111/j.1574-6968.2009.01637.x19459954 Search in Google Scholar

16. Germaine K.J., Liu X., Cabellos G.G., Hogan J.P., Ryan D., Dowling D.N.: Bacterial endophyte-enhanced phytoremediation of the organochlorine herbicide 2,4-dichlorophenoxyacetic acid. FEMS Microbiol. Ecol. 57, 302–310 (2006) Germaine K.J. Liu X. Cabellos G.G. Hogan J.P. Ryan D. Dowling D.N. Bacterial endophyte-enhanced phytoremediation of the organochlorine herbicide 2,4-dichlorophenoxyacetic acid FEMS Microbiol. Ecol 57 302 310 200610.1111/j.1574-6941.2006.00121.x16867147 Search in Google Scholar

17. Glick B.R.: Bacteria with ACC deaminase can promote plant growth and help to feed the world. Microbiol. Res. 169, 30–39 (2014) Glick B.R. Bacteria with ACC deaminase can promote plant growth and help to feed the world Microbiol. Res. 169 30 39 201410.1016/j.micres.2013.09.00924095256 Search in Google Scholar

18. Hardoim P.R., van Overbeek L.S., Elsas J.D.: Properties of bacterial endophytes and their proposed role in plant growth. Trends Microbiol. 16, 463–471 (2008) Hardoim P.R. van Overbeek L.S. Elsas J.D. Properties of bacterial endophytes and their proposed role in plant growth Trends Microbiol 16 463 471 200810.1016/j.tim.2008.07.00818789693 Search in Google Scholar

19. Ho Y.N., Hsieh J.L., Huang C.C.: Construction of a plantmicrobe phytoremediation system: combination of vetiver grass with a functional endophytic bacterium, Achromobacter xylosoxidans F3B, for aromatic pollutants removal. Bioresource Technol. 145, 43–47 (2013) Ho Y.N. Hsieh J.L. Huang C.C. Construction of a plantmicrobe phytoremediation system: combination of vetiver grass with a functional endophytic bacterium, Achromobacter xylosoxidans F3B, for aromatic pollutants removal Bioresource Technol. 145 43 47 201310.1016/j.biortech.2013.02.05123591084 Search in Google Scholar

20. Ho Y.N., Mathew D.C., Hsiao S.C., Shih C.H., Chien M.F., Chiang H.M., Huang C.C.: Selection and application of endophytic bacterium Achromobacter xylosoxidans strain F3B for improving phytoremediation of phenolic pollutants. J. Hazard. Mater. 219–220, 43–49 (2012) Ho Y.N. Mathew D.C. Hsiao S.C. Shih C.H. Chien M.F. Chiang H.M. Huang C.C. Selection and application of endophytic bacterium Achromobacter xylosoxidans strain F3B for improving phytoremediation of phenolic pollutants J. Hazard. Mater 219–220 43 49 201210.1016/j.jhazmat.2012.03.03522497718 Search in Google Scholar

21. Ijaz A., Imran A., Anwar ul Haq M., Khan Q., Afzal M.: Phytoremediation: recent advances in plant-endophytic synergistic interactions. Plant Soil, 392, 1–17 (2015) Ijaz A. Imran A. Anwar ul Haq M. Khan Q. Afzal M. Phytoremediation: recent advances in plant-endophytic synergistic interactions Plant Soil 392 1 17 201510.1007/s11104-015-2606-2 Search in Google Scholar

22. Iqbal A., Arshad M., Hashmi I., Karthikevan R., Gentry T.J., Schwab A.P.: Biodegradation of phenol and benzene by endophytic bacterial strains isolated from refinery wastewater-fed Cannabis sativa. Environ. Technol. 13, 1–10 (2017) Iqbal A. Arshad M. Hashmi I. Karthikevan R. Gentry T.J. Schwab A.P. Biodegradation of phenol and benzene by endophytic bacterial strains isolated from refinery wastewater-fed Cannabis sativa Environ. Technol 13 1 10 201710.1080/09593330.2017.133723228562230 Search in Google Scholar

23. Jin D., Jiang X., Ou Z.: Effects of concentration, head group, and structure of surfactants on the degradation of phenanthrene. J. Hazard. Mater. 144, 215–221 (2007) Jin D. Jiang X. Ou Z. Effects of concentration, head group, and structure of surfactants on the degradation of phenanthrene J. Hazard. Mater. 144 215 221 200710.1016/j.jhazmat.2006.10.01217113708 Search in Google Scholar

24. Johnston-Monje D., Raizada, M. N.: Conservation and diversity of seed associated endophytes in Zea across boundaries of evolution, ethnography and ecology. PLoS One 6, e20396 (2011) Johnston-Monje D. Raizada M. N. Conservation and diversity of seed associated endophytes in Zea across boundaries of evolution, ethnography and ecology PLoS One 6 e20396 201110.1371/journal.pone.0020396310859921673982 Search in Google Scholar

25. Kang J.W., Khan Z., Doty S.L.: Biodegradation of trichloroethylene by an endophyte of hybrid poplar. Appl. Environ. Microbiol. 78, 3504–3507 (2012) Kang J.W. Khan Z. Doty S.L. Biodegradation of trichloroethylene by an endophyte of hybrid poplar Appl. Environ. Microbiol. 78 3504 3507 201210.1128/AEM.06852-11334647722367087 Search in Google Scholar

26. Karnwal.: Use of Bio-Chemical Surfactant Producing Endophytic Bacteria Isolated from Rice Root for Heavy Metal Bioremediation. Pertanika J. Trop. Agric. Sci. 41, 699–714 (2018) Karnwal. Use of Bio-Chemical Surfactant Producing Endophytic Bacteria Isolated from Rice Root for Heavy Metal Bioremediation Pertanika J. Trop. Agric. Sci 41 699 714 2018 Search in Google Scholar

27. Khan S., Afzal M., Iqbal S., Khan Q.M.: Plant-bacteria partnerships for the remediation of hydrocarbon contaminated soils. Chemosphere, 90, 1317–1332 (2013) Khan S. Afzal M. Iqbal S. Khan Q.M. Plant-bacteria partnerships for the remediation of hydrocarbon contaminated soils Chemosphere 90 1317 1332 201310.1016/j.chemosphere.2012.09.04523058201 Search in Google Scholar

28. Khan Z., Roman D., Kintz T., delas Alas M., Yap R., Doty S.: Degradation, phytoprotection and phytoremediation of phenanthrene by endophyte Pseudomonas putida, PD1. Environ. Sci. Technol. 48, 12221–12228 (2014) Khan Z. Roman D. Kintz T. delas Alas M. Yap R. Doty S. Degradation, phytoprotection and phytoremediation of phenanthrene by endophyte Pseudomonas putida, PD1 Environ. Sci. Technol. 48 12221 12228 201410.1021/es503880t25275224 Search in Google Scholar

29. Kukla M., Płociniczak T., Piotrowska-Seget Z.: Diversity of endophytic bacteria in Lolium perenne and their potential to degrade petroleum hydrocarbons and promote plant growth. Chemosphere, 117, 40–46 (2014) Kukla M. Płociniczak T. Piotrowska-Seget Z. Diversity of endophytic bacteria in Lolium perenne and their potential to degrade petroleum hydrocarbons and promote plant growth Chemosphere 117 40 46 201410.1016/j.chemosphere.2014.05.05524954306 Search in Google Scholar

30. Li H.Y., Wei D.Q., Shen M., Zhou Z.P.: Endophytes and their role in phytoremediation. Fungal Divers. 54, 11–18 (2012) Li H.Y. Wei D.Q. Shen M. Zhou Z.P. Endophytes and their role in phytoremediation Fungal Divers 54 11 18 201210.1007/s13225-012-0165-x Search in Google Scholar

31. Li J.L., Chen B.H.: Surfactant-mediated biodegradation of polycyclic aromatic hydrocarbons. Materials, 2, 76–94 (2009) Li J.L. Chen B.H. Surfactant-mediated biodegradation of polycyclic aromatic hydrocarbons Materials 2 76 94 200910.3390/ma2010076 Search in Google Scholar

32. Lima J.M.S., Pereira J.O., Batista I.H., Pereira Junior R.C., Barroso H. dos S., Costa Neto P. de Q., Jackisch-Matsuura A.B., França S de C, Azevedo J.L.: Biosurfactants produced by Microbacterium sp. isolated from aquatic macrophytes in hydrocarbon-contaminated area in the Rio Negro, Manaus, Amazonas. Acta Sci. Biol. Sci. 39, 13–20 (2017) Lima J.M.S. Pereira J.O. Batista I.H. Pereira Junior R.C. Barroso H. dos S. Costa Neto P. de Q. Jackisch-Matsuura A.B. França S de C Azevedo J.L. Biosurfactants produced by Microbacterium sp. isolated from aquatic macrophytes in hydrocarbon-contaminated area in the Rio Negro, Manaus, Amazonas Acta Sci. Biol. Sci. 39 13 20 201710.4025/actascibiolsci.v39i1.33842 Search in Google Scholar

33. Liu J., Liu S., Sun K., Sheng Y., Gu Y., Gao Y.: Colonization on root surface by a phenanthrene degrading endophytic bacterium and its application for reducing plant phenanthrene contamination. PLoS ONE, 9, e108249 (2014) Liu J. Liu S. Sun K. Sheng Y. Gu Y. Gao Y. Colonization on root surface by a phenanthrene degrading endophytic bacterium and its application for reducing plant phenanthrene contamination PLoS ONE 9 e108249 201410.1371/journal.pone.0108249417270525247301 Search in Google Scholar

34. Liu X., Germaine K.J., Ryan D., Dowling D.N.: Whole-cell fluorescent biosensors for bioavailability and biodegradation of polychlorinated biphenyls. Sensors, 10, 1377–1398 (2010) Liu X. Germaine K.J. Ryan D. Dowling D.N. Whole-cell fluorescent biosensors for bioavailability and biodegradation of polychlorinated biphenyls Sensors 10 1377 1398 201010.3390/s100201377324401922205873 Search in Google Scholar

35. Łuksa A., Mendrycka M., Stawarz M.: Bioremediacja gleb zaolejonych z wykorzystaniem sorbentów. Nafta-Gaz, 66, 810–818 (2010) Łuksa A. Mendrycka M. Stawarz M. Bioremediacja gleb zaolejonych z wykorzystaniem sorbentów Nafta-Gaz 66 810 818 2010 Search in Google Scholar

36. Marecik R., Króliczak P., Cyplik P.: Fitoremediacja – alternatywa dla tradycyjnych metod oczyszczania środowiska. Biotechnologia, 74, 88–97 (2006) Marecik R. Króliczak P. Cyplik P. Fitoremediacja – alternatywa dla tradycyjnych metod oczyszczania środowiska Biotechnologia 74 88 97 2006 Search in Google Scholar

37. McGuinness M., Dowling D.: Plant-associated bacterial degradation of toxic organic compounds in soil. Int. J. Environ. Res. Public Health, 6, 2226–2247 (2009) McGuinness M. Dowling D. Plant-associated bacterial degradation of toxic organic compounds in soil Int. J. Environ. Res. Public Health 6 2226 2247 200910.3390/ijerph6082226273888419742157 Search in Google Scholar

38. McGuinness M.C., Mazurkiewicz V., Brennan E., Dowling D.N., Dechlorination of pesticides by a specific bacterial glutathione S-transferase, BphKLB400: Potential for bioremediation. Eng. Life Sci. 7, 611–615 (2007) McGuinness M.C. Mazurkiewicz V. Brennan E. Dowling D.N. Dechlorination of pesticides by a specific bacterial glutathione S-transferase, BphKLB400: Potential for bioremediation Eng. Life Sci 7 611 615 200710.1002/elsc.200720218 Search in Google Scholar

39. Mercado-Blanco J., Lugtenberg B.J.J.: Biotechnological Applications of Bacterial Endophytes. Current Biotechnology, 3, 60–75 (2014) Mercado-Blanco J. Lugtenberg B.J.J. Biotechnological Applications of Bacterial Endophytes Current Biotechnology 3 60 75 201410.2174/22115501113026660038 Search in Google Scholar

40. Michałowicz J., Duda W.: Phenols-sources and toxicity. Pol. J. Environ. Stud. 16, 347–362 (2007) Michałowicz J. Duda W. Phenols-sources and toxicity Pol. J. Environ. Stud. 16 347 362 2007 Search in Google Scholar

41. Mitter B., Petric A., Shin M.W., Chain P.S., Hauberg-Lotte L., Reinhold-Hurek B., Nowak J., Sessitsch A.: Comparative genome analysis of Burkholderia phytofirmans PsJN reveals a wide spectrum of endophytic lifestyles based on interaction strategies with host plants. Front Plant Sci. 4, 120 (2013) Mitter B. Petric A. Shin M.W. Chain P.S. Hauberg-Lotte L. Reinhold-Hurek B. Nowak J. Sessitsch A. Comparative genome analysis of Burkholderia phytofirmans PsJN reveals a wide spectrum of endophytic lifestyles based on interaction strategies with host plants Front Plant Sci. 4 120 201310.3389/fpls.2013.00120363938623641251 Search in Google Scholar

42. Mohan P.K., Nakhla G., Yanful E.K.: Biokinetics of biodegradation of surfatants under aerobic, anoxic and anaerobic conditions. Water Res. 40, 533–540 (2006) Mohan P.K. Nakhla G. Yanful E.K. Biokinetics of biodegradation of surfatants under aerobic, anoxic and anaerobic conditions Water Res 40 533 540 200610.1016/j.watres.2005.11.03016405945 Search in Google Scholar

43. Moore F.P., Barac T., Borremans B., Oeyen L., Vangronsveld J., van der Lelie D., Campbell C.D., Moore E.R.B.: Endophytic bacterial diversity in poplar trees growing on a BTEX-contaminated site: the characterisation of isolates with potential to enhance phytoremediation. Syst. Appl. Microbiol. 29, 539–556 (2006) Moore F.P. Barac T. Borremans B. Oeyen L. Vangronsveld J. van der Lelie D. Campbell C.D. Moore E.R.B. Endophytic bacterial diversity in poplar trees growing on a BTEX-contaminated site: the characterisation of isolates with potential to enhance phytoremediation Syst. Appl. Microbiol 29 539 556 200610.1016/j.syapm.2005.11.01216919907 Search in Google Scholar

44. Nath, D., Haque, A., Asraful, S., Dae, H., Keun, M.: Ecotoxicology and Environmental Safety Cloning and expression of ophB gene encoding organophosphorus hydrolase from endophytic Pseudomonas sp. BF1-3 degrades organophosphorus pesticide chlorpyrifos. Ecotoxicol. Environ. Saf. 108, 135–141 (2014) Nath, D. Haque, A. Asraful, S. Dae, H. Keun, M. Ecotoxicology and Environmental Safety Cloning and expression of ophB gene encoding organophosphorus hydrolase from endophytic Pseudomonas sp. BF1-3 degrades organophosphorus pesticide chlorpyrifos Ecotoxicol. Environ. Saf. 108 135 141 201410.1016/j.ecoenv.2014.06.02325062445 Search in Google Scholar

45. Oliveira V., Gomes N.C., Almeida A., Silva A.M., Silva H., Cunha A.: Microbe-assisted phytoremediation of hydrocarbons in estuarine environments. Microb. Ecol. 69, 1–12 (2015) Oliveira V. Gomes N.C. Almeida A. Silva A.M. Silva H. Cunha A. Microbe-assisted phytoremediation of hydrocarbons in estuarine environments Microb. Ecol. 69 1 12 201510.1007/s00248-014-0455-925001506 Search in Google Scholar

46. Ongena M., Jacques P.: Bacillus lipopeptides: versatile weapons for plant disease biocontrol. Trends Microbiol. 16, 115–125 (2008) Ongena M. Jacques P. Bacillus lipopeptides: versatile weapons for plant disease biocontrol Trends Microbiol. 16 115 125 200810.1016/j.tim.2007.12.00918289856 Search in Google Scholar

47. Pacwa-Plociniczak M., Plaza G.A., Piotrowska-Seget Z., Cameotra S.S.: Environmental applications of biosurfactants: recent advances. Int. J. Mol. Sci. 12, 633–654 (2011) Pacwa-Plociniczak M. Plaza G.A. Piotrowska-Seget Z. Cameotra S.S. Environmental applications of biosurfactants: recent advances Int. J. Mol. Sci. 12 633 654 201110.3390/ijms12010633303997121340005 Search in Google Scholar

48. Pathak K.V., Keharia H.: Application of extracellular lipopeptide biosurfactant produced by endophytic Bacillus subtilis K1 isolated from aerial roots of banyan (Ficus benghalensis) in microbially enhanced oil recovery (MEOR). Biotech. 4, 41–48 (2014) Pathak K.V. Keharia H. Application of extracellular lipopeptide biosurfactant produced by endophytic Bacillus subtilis K1 isolated from aerial roots of banyan (Ficus benghalensis) in microbially enhanced oil recovery (MEOR) Biotech. 4 41 48 201410.1007/s13205-013-0119-3390956628324457 Search in Google Scholar

49. Patrao S., Acharya A., Suvarna N., Sequeira M.: Degradation of anionic surfactants by Bacillus subtilis and Bacillus cereus. Pharm Biol Sci. 3, 42–45 (2012) Patrao S. Acharya A. Suvarna N. Sequeira M. Degradation of anionic surfactants by Bacillus subtilis and Bacillus cereus Pharm Biol Sci. 3 42 45 201210.9790/3008-0314245 Search in Google Scholar

50. Pawlik M., Piotrowska-Seget Z.: Endophytic bacteria associated with Hieracium piloselloides : Their potential for hydrocarbonutilizing and plant growth-promotion. J. Toxicol. Environ. Heal. Part A. 78, 860–870 (2015) Pawlik M. Piotrowska-Seget Z. Endophytic bacteria associated with Hieracium piloselloides : Their potential for hydrocarbonutilizing and plant growth-promotion J. Toxicol. Environ. Heal. Part A. 78 860 870 201510.1080/15287394.2015.105120026167752 Search in Google Scholar

51. Pawlik M., Cania B., Thijs S., Vangronsveld J., Piotrowska-Seget Z.: Hydrocarbon degradation potential and plant growth-promoting activity of culturable endophytic bacteria of Lotus corniculatus and Oenothera biennis from a long-term polluted site. Environ. Sci. Pollut. Res. DOI 10.1007/s11356-017-9496-1 (2017) Pawlik M. Cania B. Thijs S. Vangronsveld J. Piotrowska-Seget Z. Hydrocarbon degradation potential and plant growth-promoting activity of culturable endophytic bacteria of Lotus corniculatus and Oenothera biennis from a long-term polluted site Environ. Sci. Pollut. Res. DOI 10.1007/s11356-017-9496-1 2017557079728681302 Open DOISearch in Google Scholar

52. Panz K, Miksch K.: Phytoremediation of explosives (TNT, RDX, HMX) by wildtype and transgenic plants. J. Environ. Manage. 113, 85–92 (2012) Panz K Miksch K. Phytoremediation of explosives (TNT, RDX, HMX) by wildtype and transgenic plants J. Environ. Manage 113 85 92 201210.1016/j.jenvman.2012.08.01622996005 Search in Google Scholar

53. Peng A., Liu J., Gao Y., Chen Z.: Distribution of endophytic bacteria in Alopecurus aequalis Sobol and Oxalis corniculata L. from soils contaminated by polycyclic aromatic hydrocarbons. PLoS ONE, 8, e83054 (2013) Peng A. Liu J. Gao Y. Chen Z. Distribution of endophytic bacteria in Alopecurus aequalis Sobol and Oxalis corniculata L. from soils contaminated by polycyclic aromatic hydrocarbons PLoS ONE 8 e83054 201310.1371/journal.pone.0083054386620324358247 Search in Google Scholar

54. Phillips L.A., Germida J.J., Farrell R.E., Greer Ch.W.: Hydrocarbon degradation potential and activity of endophytic bacteria associated with prairie plants. Soil Biol. Biochem. 40, 3054–3064 (2008) Phillips L.A. Germida J.J. Farrell R.E. Greer Ch.W. Hydrocarbon degradation potential and activity of endophytic bacteria associated with prairie plants Soil Biol. Biochem. 40 3054 3064 200810.1016/j.soilbio.2008.09.006 Search in Google Scholar

55. Pilon-Smits E.: Phytoremediation. Ann. Rev. Plant Biol. 56, 15–39 (2005) Pilon-Smits E. Phytoremediation Ann. Rev. Plant Biol. 56 15 39 200510.1146/annurev.arplant.56.032604.14421415862088 Search in Google Scholar

56. Pisarska K., Pietr S.J.: Bakterie endofityczne – ich pochodzenie i interakcje z roślinami. Post. Mikrobiol. 53, 141–151 (2014) Pisarska K. Pietr S.J. Bakterie endofityczne – ich pochodzenie i interakcje z roślinami Post. Mikrobiol. 53 141 151 2014 Search in Google Scholar

57. Raaijmakers J. M., De Bruijn I., Nybroe O., Ongena M.: Natural functions of lipopeptides from Bacillus and Pseudomonas: More than surfactants and antibiotics. FEMS Microbiol. Rev. 34, 1037–1062 (2010) Raaijmakers J. M. De Bruijn I. Nybroe O. Ongena M. Natural functions of lipopeptides from Bacillus and Pseudomonas: More than surfactants and antibiotics FEMS Microbiol. Rev 34 1037 1062 201010.1111/j.1574-6976.2010.00221.x20412310 Search in Google Scholar

58. Rebello S., Asok A.K., Mundayoor S., Jisha M.S.: Surfactants: Toxicity, remediation and green surfactants. Environ. Chem. Lett. 12, 275–287 (2014) Rebello S. Asok A.K. Mundayoor S. Jisha M.S. Surfactants: Toxicity, remediation and green surfactants Environ. Chem. Lett 12 275 287 201410.1007/s10311-014-0466-2 Search in Google Scholar

59. Rosenblueth M., Martínez-Romero E.: Bacterial endophytes and their interactions with hosts. Mol. Plant-Microbe Interact. 19, 827–837 (2006) Rosenblueth M. Martínez-Romero E. Bacterial endophytes and their interactions with hosts Mol. Plant-Microbe Interact. 19 827 837 200610.1094/MPMI-19-082716903349 Search in Google Scholar

60. Ryan R., Germaine K., Franks A., Ryan D.J., Dowling D.N.: Bacterial endophyte: recent developments and applications. FEMS Microbiol. Lett. 278, 1–9 (2008) Ryan R. Germaine K. Franks A. Ryan D.J. Dowling D.N. Bacterial endophyte: recent developments and applications FEMS Microbiol. Lett. 278 1 9 200810.1111/j.1574-6968.2007.00918.x18034833 Search in Google Scholar

61. Sachdev D.P., Cameotra S.S.: Biosurfactants in agriculture. Appl. Microbiol. Biotechnol. 97, 1005–1016 (2013) Sachdev D.P. Cameotra S.S. Biosurfactants in agriculture Appl. Microbiol. Biotechnol. 97 1005 1016 201310.1007/s00253-012-4641-8355534823280539 Search in Google Scholar

62. Santoyo G., Moreno-Hagelsieb G., Orozco-Mosqueda M.C., Glick B.R.: Plant growth-promoting bacterial endophytes. Microbiol. Res. 183, 92–99 (2016) Santoyo G. Moreno-Hagelsieb G. Orozco-Mosqueda M.C. Glick B.R. Plant growth-promoting bacterial endophytes Microbiol. Res. 183 92 99 201610.1016/j.micres.2015.11.00826805622 Search in Google Scholar

63. Siciliano S.D., Fortin N., Mihoc A., Wisse G., Labelle S., Beaumier D., Ouellette D., Roy R., Whyte L.G., Banks M.K., Schwab P., Lee K., Greer C.W.: Selection of specific endophytic bacterial genotypes by plants in response to soil contamination. Appl. Environ. Microbiol. 67, 2469–2475 (2001) Siciliano S.D. Fortin N. Mihoc A. Wisse G. Labelle S. Beaumier D. Ouellette D. Roy R. Whyte L.G. Banks M.K. Schwab P. Lee K. Greer C.W. Selection of specific endophytic bacterial genotypes by plants in response to soil contamination Appl. Environ. Microbiol 67 2469 2475 200110.1128/AEM.67.6.2469-2475.20019289611375152 Search in Google Scholar

64. Semrau J.D.: Bioremediation via methanotrphy: overview of recent findings and suggestions for future research. Front. Microbiol. 2, 209 (2011) Semrau J.D. Bioremediation via methanotrphy: overview of recent findings and suggestions for future research Front. Microbiol 2 209 201110.3389/fmicb.2011.00209319145922016748 Search in Google Scholar

65. Sheng X., Chen X., He L.: Characteristics of an endophytic pyrene-degrading bacterium of Enterobacter sp. 12J1 from Allium macrostemon Bunge. Int. Biodeterior. Biodegrad. 62, 88–95 (2008) Sheng X. Chen X. He L. Characteristics of an endophytic pyrene-degrading bacterium of Enterobacter sp. 12J1 from Allium macrostemon Bunge Int. Biodeterior. Biodegrad 62 88 95 200810.1016/j.ibiod.2007.12.003 Search in Google Scholar

66. Sun K., Liu J., Gao Y., Jin L., Gu Y., Wang W. Isolation, plant colonization potential, and phenanthrene degradation performance of the endophytic bacterium Pseudomonas sp. Ph6-gfp. Sci. Rep. 4, 5462 (2014) Sun K. Liu J. Gao Y. Jin L. Gu Y. Wang W. Isolation, plant colonization potential, and phenanthrene degradation performance of the endophytic bacterium Pseudomonas sp. Ph6-gfp Sci. Rep 4 5462 201410.1038/srep05462407131024964867 Search in Google Scholar

67. Stępniewska Z., Kuźniar A.: Endophytic microorganisms – promising applications in bioremediation of greenhouse gases. Appl. Microbiol. Biotechnol. 97, 9589–9596 (2013) Stępniewska Z. Kuźniar A. Endophytic microorganisms – promising applications in bioremediation of greenhouse gases Appl. Microbiol. Biotechnol. 97 9589 9596 201310.1007/s00253-013-5235-9382549324048641 Search in Google Scholar

68. Stępniewska Z., Goraj W., Kuźniar A.: Przemiany metanu w środowiskach torfowych. Forest Research Papers, 75, 101–110 (2014) Stępniewska Z. Goraj W. Kuźniar A. Przemiany metanu w środowiskach torfowych Forest Research Papers 75 101 110 201410.2478/frp-2014-0010 Search in Google Scholar

69. Taghavi S., Barac T., Greenberg B., Borremans B., Vangronsveld J., van der Lelie D.: Horizontal gene transfer to endogenous endophytic bacteria from poplar improves phytoremediation of toluene. Appl. Environ. Microbiol. 71, 8500–8505 (2005) Taghavi S. Barac T. Greenberg B. Borremans B. Vangronsveld J. van der Lelie D. Horizontal gene transfer to endogenous endophytic bacteria from poplar improves phytoremediation of toluene Appl. Environ. Microbiol. 71 8500 8505 200510.1128/AEM.71.12.8500-8505.2005131737116332840 Search in Google Scholar

70. Taghavi S., Weyens N., Vangronsveld J., van der Lelie D.: Improved phytoremediation of organic contaminants through engineering of bacterial endophytes of trees (w) Endophytes of forest trees, red. Pirttilä, A.M, Frank A.C, Springer, Dordrecht, 2011, s. 205–216 Taghavi S. Weyens N. Vangronsveld J. van der Lelie D. Improved phytoremediation of organic contaminants through engineering of bacterial endophytes of trees (w) Endophytes of forest trees, red. Pirttilä A.M Frank A.C Springer Dordrecht 2011 s. 205 216 10.1007/978-94-007-1599-8_13 Search in Google Scholar

71. Thijs S., Van Dillewijn P., Sillen W., Truyens S., Holtappels M., D’Haen J., Carleer R., Weyens N., Ameloot M., Ramos J.L., Vangronsveld J.: Exploring the rhizospheric and endophytic bacterial communities of Acer pseudoplatanus growing on a TNT-contaminated soil: towards the development of a rhizocompetent TNT-detoxifying plant growth promoting consortium. Plant Soil. 385, 15–36 (2014) Thijs S. Van Dillewijn P. Sillen W. Truyens S. Holtappels M. D’Haen J. Carleer R. Weyens N. Ameloot M. Ramos J.L. Vangronsveld J. Exploring the rhizospheric and endophytic bacterial communities of Acer pseudoplatanus growing on a TNT-contaminated soil: towards the development of a rhizocompetent TNT-detoxifying plant growth promoting consortium Plant Soil 385 15 36 201410.1007/s11104-014-2260-0 Search in Google Scholar

72. Truu J., Truu M., Espenberg M., Nolvak H., Juhanson J.: Phytoremediation and plant-assisted bioremediation in soil and treatment wetlands: a review. Open Biotechnol. J. 9, 85–92 (2015) Truu J. Truu M. Espenberg M. Nolvak H. Juhanson J. Phytoremediation and plant-assisted bioremediation in soil and treatment wetlands: a review Open Biotechnol. J. 9 85 92 201510.2174/1874070701509010085 Search in Google Scholar

73. Van Aken B., Peres C.M., Doty S.L., Yoon J.M., Schnoor J.L.: Methylobacterium populi sp. Nov., a novel aerobic, pink-pigmented, facultatively methylotrophic, methane-utilizing bacterium isolated from poplar trees (Populus deltoids x nigra DN34). Int. J. Syst. Evol. Microbiol. 54, 1191–1196 (2004) Van Aken B. Peres C.M. Doty S.L. Yoon J.M. Schnoor J.L. Methylobacterium populi sp. Nov., a novel aerobic, pink-pigmented, facultatively methylotrophic, methane-utilizing bacterium isolated from poplar trees (Populus deltoids x nigra DN34) Int. J. Syst. Evol. Microbiol 54 1191 1196 200410.1099/ijs.0.02796-015280290 Search in Google Scholar

74. Wang Y., Li H., Zhao W., He X., Chen J., Geng X., Xiao M.: Induction of toluene degradation and growth promotion in corn and wheat by horizontal gene transfer within endophytic bacteria. Soil Biol. Biochem. 42, 1051–1057 (2010) Wang Y. Li H. Zhao W. He X. Chen J. Geng X. Xiao M. Induction of toluene degradation and growth promotion in corn and wheat by horizontal gene transfer within endophytic bacteria Soil Biol. Biochem 42 1051 1057 201010.1016/j.soilbio.2010.03.002 Search in Google Scholar

75. Weyens N., van der Lelie D., Taghavi S., Vangronsveld J.: Phytoremediation: plant-endophyte partnerships take the challenge. Curr. Opin. Biotechnol. 20, 248–254 (2009) Weyens N. van der Lelie D. Taghavi S. Vangronsveld J. Phytoremediation: plant-endophyte partnerships take the challenge Curr. Opin. Biotechnol. 20 248 254 200910.1016/j.copbio.2009.02.01219327979 Search in Google Scholar

76. Weyens N., van der Lelie D., Artois T.: Bioaugmentation with engineered endophytic bacteria improves contaminant fate in phytoremediation. Environ. Sci. Technol. 43, 9413–9418 (2009) Weyens N. van der Lelie D. Artois T. Bioaugmentation with engineered endophytic bacteria improves contaminant fate in phytoremediation Environ. Sci. Technol 43 9413 9418 200910.1021/es901997z20000537 Search in Google Scholar

77. Weyens N., Truyens S., Dupae J., Newman L., Taghavi S., van der Lelie D., Carleer R., Vangronsveld J.: Potential of the TCE-degrading endophyte Pseudomonas putida W619-TCE to improve plant growth and reduce TCE phytotoxicity and evapotranspiration in poplar cuttings. Environ. Pollut. 158, 2915–2919 (2010) Weyens N. Truyens S. Dupae J. Newman L. Taghavi S. van der Lelie D. Carleer R. Vangronsveld J. Potential of the TCE-degrading endophyte Pseudomonas putida W619-TCE to improve plant growth and reduce TCE phytotoxicity and evapotranspiration in poplar cuttings Environ. Pollut 158 2915 2919 201010.1016/j.envpol.2010.06.00420598789 Search in Google Scholar

78. Weyens N., Croes S., Dupae J., Newman L., van der Lelie D., Carleer R., Vangronsveld J.: Endophytic bacteria improve phytoremediation of Ni and TCE co-contamination. Environ. Pollut. 158, 2422–2427 (2010) Weyens N. Croes S. Dupae J. Newman L. van der Lelie D. Carleer R. Vangronsveld J. Endophytic bacteria improve phytoremediation of Ni and TCE co-contamination Environ. Pollut 158 2422 2427 201010.1016/j.envpol.2010.04.00420462680 Search in Google Scholar

79. Wu T., Xu J., Xie W., Yao Z., Yang H., Sun C., Li X.: Pseudomonas aeruginosa L10: A Hydrocarbon-Degrading, Biosurfactant-Producing, and Plant-Growth-Promoting Endophytic Bacterium Isolated From a Reed (Phragmites australis). Front. Microbiol. 9, 1087 (2018) Wu T. Xu J. Xie W. Yao Z. Yang H. Sun C. Li X. Pseudomonas aeruginosa L10: A Hydrocarbon-Degrading, Biosurfactant-Producing, and Plant-Growth-Promoting Endophytic Bacterium Isolated From a Reed (Phragmites australis) Front. Microbiol 9 1087 201810.3389/fmicb.2018.01087598098829887849 Search in Google Scholar

80. Xu X., Sun J., Nie Y. Wu X.: Spirodela polyrhiza stimulates the growth of its endophytes but differentially increases their fenpropathrin-degradation capabilities. Chemosphere, 125, 33–40 (2015) Xu X. Sun J. Nie Y. Wu X. Spirodela polyrhiza stimulates the growth of its endophytes but differentially increases their fenpropathrin-degradation capabilities Chemosphere 125 33 40 201510.1016/j.chemosphere.2014.12.08425655443 Search in Google Scholar

81. Yousaf S., Afzal M., Anees M., Malik R.N., Campisano A.: Ecology and functional potential of endophytes in bioremediation: a molecular perspective (w) Advances in endophytic research, red. Verma V.C, Gange A.C, Springer, New Delhi, 2014, s. 301–320 Yousaf S. Afzal M. Anees M. Malik R.N. Campisano A. Ecology and functional potential of endophytes in bioremediation: a molecular perspective (w) Advances in endophytic research, red. Verma V.C Gange A.C Springer New Delhi 2014 s. 301 320 10.1007/978-81-322-1575-2_16 Search in Google Scholar

82. Yousaf S., Afzal M., Reichenauer T.G., Brady C.L., Sessitsch A.: Hydrocarbon degradation, plant colonization and gene expression of alkane degradation genes by endophytic Enterobacter ludwigii strains. Environ. Pollut. 159, 2675–2683 (2011) Yousaf S. Afzal M. Reichenauer T.G. Brady C.L. Sessitsch A. Hydrocarbon degradation, plant colonization and gene expression of alkane degradation genes by endophytic Enterobacter ludwigii strains Environ. Pollut. 159 2675 2683 201110.1016/j.envpol.2011.05.03121700373 Search in Google Scholar

83. Zhang X., Liu X., Wang Q., Chen X., Li H., Wei J., Xu G.: Diesel degradation potential of endophytic bacteria isolated from Scirpus triqueter. Int. Biodeterior. Biodegrad. 87, 99–105 (2014) Zhang X. Liu X. Wang Q. Chen X. Li H. Wei J. Xu G. Diesel degradation potential of endophytic bacteria isolated from Scirpus triqueter Int. Biodeterior. Biodegrad 87 99 105 201410.1016/j.ibiod.2013.11.007 Search in Google Scholar

84. Zemleduch A., Tomaszewska B.: Mechanizmy, procesy i oddziaływania w fitooremediacji. Kosmos, 56, 393–407 (2007) Zemleduch A. Tomaszewska B. Mechanizmy, procesy i oddziaływania w fitooremediacji Kosmos 56 393 407 2007 Search in Google Scholar

85. Zhong Y., Luan T., Wang X., Lan C., Tam N. F. Y.: Influence of growth medium on cometabolic degradation of polycyclic aromatic hydrocarbons by Sphingomonas sp. strain PheB4. Appl. Microbiol. Biotechnol. 75, 175–186 (2007) Zhong Y. Luan T. Wang X. Lan C. Tam N. F. Y. Influence of growth medium on cometabolic degradation of polycyclic aromatic hydrocarbons by Sphingomonas sp. strain PheB4 Appl. Microbiol. Biotechnol. 75 175 186 200710.1007/s00253-006-0789-417216444 Search in Google Scholar

86. Zhu X., Ni X., Waigi M.G., Liu J., Sun K., Gao Y.: Biodegradation of mixed PAHs by PAH-degrading endophytic bacteria. Int. J. Environ. Res. Public Health, 13, 805–818 (2016) Zhu X. Ni X. Waigi M.G. Liu J. Sun K. Gao Y. Biodegradation of mixed PAHs by PAH-degrading endophytic bacteria Int. J. Environ. Res. Public Health 13 805 818 201610.3390/ijerph13080805499749127517944 Search in Google Scholar