Parental and Consensus Linkage Maps of Eucalyptus globulus Using AFLP and Microsatellite Markers

AGRAMA, H. A., T. L. GEORGE and S. F. SALAH (2002): Construction of genome map for Eucalyptus camaldulensis DEHN. Silvae Genetica 51: 201-206.Search in Google Scholar

AHUJA, M. R. (2001): Recent advances in molecular genetics of forest trees. Euphytica 121: 173-195.10.1023/A:1012226319449Search in Google Scholar

AVISE, J. C. (1994): Molecular markers, natural history and evolution. Chapman and Hall International, New York.10.1007/978-1-4615-2381-9Search in Google Scholar

BRADSHAW, H. D. and R. F. STETTLER (1994): Molecular genetics of growth and development in Populus II. Segregation distortion due to genetic load. Theoretical and Applied Genetics 89: 551-558.10.1007/BF0022244724177929Search in Google Scholar

BRONDANI, R. P. V., C. BRONDANI, R. TARCHINI and D. GRATTAPAGLIA (1998): Development, characterization and mapping of microsatellite markers in Eucalyptus grandis and Eucalyptus urophylla. Theoretical & Applied Genetics 97: 816-827.10.1007/s001220050961Open DOISearch in Google Scholar

BRONDANI, R. P. V. (2001): Development, characterization and mapping of microsatellite markers in Eucalyptus. PhD thesis, University of Brasília, Brazil.Search in Google Scholar

BRONDANI, R. P. V., C. BRONDANI and D. GRATTAPAGLIA (2002): Towards a genus-wide reference linkage map for Eucalyptus based exclusively on highly informative microsatellite markers. Molecular Genetics & Genomics 267: 338-347.10.1007/s00438-002-0665-612073036Search in Google Scholar

BROOKER, M. I. H. (2000): A new classification of the genus Eucalyptus L’Hér. (Myrtaceae). Australian Systematic Botany 13: 79-148.10.1071/SB98008Search in Google Scholar

BUCKLER, E. S., T. L. PHELPS-DURR, C. S. KEITH BUCKLER, R. KELLY DAWE, J. F. DOEBLEY and T. P. HOLTSFORD (1999): Meiotic drive of chromosomal knobs reshaped the maize genome. Genetics 153: 415-426.10.1093/genetics/153.1.415146072810471723Search in Google Scholar

BUNDOCK, P. C., M. HAYDEN and R. E. VAILLANCOURT (2000): Linkage maps of Eucalyptus globulus using RAPD and microsatellite markers. Silvae Genetica 49: 223-232.Search in Google Scholar

BUTCHER, P. A., E. R. WILLIAMS, D. WHITAKER, S. LING, T. P. SPEED and G. F. MORAN (2002): Improving linkage analysis in outcrossed forest trees - an example from Acacia mangium. Theoretical and Applied Genetics 104: 1185-1191.10.1007/s00122-001-0820-112582629Search in Google Scholar

BYRNE, M., J. C. MURRELL, B. ALLEN and G. F. MORAN (1995): An integrated genetic linkage map for eucalypts using RFLP, RAPD and isozyme markers. Theoretical and Applied genetics 91: 869-875.10.1007/BF0022389424169971Search in Google Scholar

BYRNE, M., M. I. MARQUES-GARCIA, T. UREN, D. S. SMITH and G. F. MORAN (1996): Conservation and genetic diversity of microsatellite loci in the genus Eucalyptus. Australian Journal of Botany 44: 331-341.10.1071/BT9960331Open DOISearch in Google Scholar

CARNEGIE, A. J., P. J. KEANE, P. K. ADES and I. W. SMITH (1994): Variation in susceptibility of Eucalyptus globulus provenances to Mycosphaerella leaf disease. Canadian Journal of Forest Research 24: 1751-1757.10.1139/x94-226Open DOISearch in Google Scholar

CERVERA, M. T., C. PLOMION and C. MALPICA (2000): Molecular markers and genome mapping in woody plants, pp. 375-394. In: Molecular biology of woody plants, edited by JAIN, S. M. and MINOCHA, S. C., Volume 1, Kluwer Academic Publishers, Netherlands.10.1007/978-94-017-2311-4_15Search in Google Scholar

CERVERA, M. T., V. STORME, B. IVENS, J. GUSMÃO, B. H. LIU, V. HOSTYN, J. V. SLYCKEN, M. V. MONTAGU and W. BOERJAN (2001): Dense genetic linkage maps of three Populus species (Populus deltoides, P. nigra and P. trichocarpa) based on AFLP and microsatellite markers. Genetics 158: 787-809.10.1093/genetics/158.2.787146169411404342Search in Google Scholar

DEVEY, M. E., M. M. SEWELL, T. L. UREN and D. B. NEALE (1999): Comparative mapping in loblolly and radiata pine using RFLP and microsatellite markers. Theoretical & Applied Genetics 99: 656-662.10.1007/s00122005128122665202Search in Google Scholar

DOYLE, J. J. and J. L. DOYLE (1990): Isolation of plant DNA from fresh tissue. Focus 12, 13-15.Search in Google Scholar

DUTKOWSKI, G. W. and B. M. POTTS (1999): Geographic patterns of genetic variation in Eucalyptus globulus ssp. globulus and a revised racial classification. Australian Journal of Botany 47: 237-263.10.1071/BT97114Open DOISearch in Google Scholar

EDWARDS, J. H. (1991): The reliability of locus orderings. Annals of Human Genetics 55: 315-320. 10.1111/j.1469-1809.1991.tb00858.x1819231Open DOISearch in Google Scholar

ELDRIDGE, K., J. DAVIDSON, C. HARWOOD and G. VAN WYK (1993): Eucalypt domestication and breeding. Oxford University Press, New York.Search in Google Scholar

ERPELDING, J. E., N. K. BLAKE, T. K. BLAKE and L. E. TALBERT (1996): Transfer of sequence tagged site PCR markers between wheat and barley. Genome 39: 802-810.10.1139/g96-10118469937Search in Google Scholar

GEBHARDT, C., E. RITTER, E. BARONE, T. DEBENER, B. WALKEMEIER, U. SCHACHTSCHNABEL, H. KAUFMANN, R. D. THOMPSON, M. W. BONEIRBALE, M. W. GANAL, S. D. TANKSLEY and F. SALAMINI (1991): RFLP maps of potato and their alignment with the homologous tomato genome. Theoretical and Applied Genetics 83: 49-57.10.1007/BF0022922524202256Open DOISearch in Google Scholar

GILLET, E. and H.-R. GREGORIUS (1992): What can be inferred from open pollinated progenies about the source of observed segregation distortion? - A case study in Castanea sativa Mill. Silvae Genetica 41: 82-87.Search in Google Scholar

GION, J.-M., P. RECH, J. GRIMA PETTENATI, D. VERHAEGEN and C. PLOMION (2000): Mapping candidate genes in Eucalyptus with emphasis on lignification genes. Molecular Breeding 6: 441-449.10.1023/A:1026552515218Open DOISearch in Google Scholar

GRATTAPAGLIA, D. (1997): Opportunities and challenges for the incorporation of genomic analysis in Eucalyptus breeding, pp. 129-136. In: Silviculture and Improvement of Eucalypts, Proceedings IUFRO Conference, Salvador, Brazil.Search in Google Scholar

GRATTAPAGLIA, D. (2000): Molecular breeding of Eucalyptus, pp. 451-474. In: Molecular biology of woody plants, edited by JAIN, S. M. and MINOCHA, S. C., Volume 1, Kluwer Academic Publishers, Netherlands.10.1007/978-94-017-2311-4_19Search in Google Scholar

GRATTAPAGLIA, D. and R. SEDEROFF (1994): Genetic linkage maps of Eucalyptus grandis and Eucalyptus urophylla using a pseudo-testcross mapping strategy and RAPD markers. Genetics 137: 1121-1137.10.1093/genetics/137.4.1121Search in Google Scholar

GUPTA, V., A. MUKHOPADHYAY, N. ARUMUGAM, Y. S. SODHI and A. K. PRADHAN (2004): Molecular tagging of erucic acid trait in oilseed mustard (Brassica juncea) by QTL mapping and single nucleotide polymorphisms in FAE1 gene. Theoretical and Applied Genetics 108: 743-749.10.1007/s00122-003-1481-zSearch in Google Scholar

HACKETT, C. A. and L. B. BROADFOOT (2003): Effects of genotyping errors, missing values and segregation distortion in molecular marker data on the construction of linkage maps. Heredity 90: 33-38.10.1038/sj.hdy.6800173Open DOISearch in Google Scholar

JONES, M. E., R. L. STOKOE, M. J. CROSS, L. J. SCOTT, T. L. MAGUIRE and M. SHEPHERD (2001): Isolation of microsatellite loci from spotted gum (Corymbia variegata), and cross-species amplification in Corymbia and Eucalyptus. Molecular Ecology Notes 1: 276-278.10.1046/j.1471-8278.2001.00105.xSearch in Google Scholar

KEARSEY, M. J. and H. S. POONI (1996): The genetical analysis of quantitative traits. Chapman and Hall, London.10.1007/978-1-4899-4441-2Open DOISearch in Google Scholar

KEATS, B. J. B., S. L. SHERMAN, N. E. MORTON, E. B. ROBSON, K. H. BUETOW, P. E. CARTWRIGHT, A. CHAKRAVARTI, U. FRANCKE, P. P. GREEN and J. OTT (1991): Guidelines for human linkage maps - an International System for Human Linkage Maps (ISLM 1990). Annals Human Genetics 55: 1-6.10.1111/j.1469-1809.1991.tb00392.xOpen DOISearch in Google Scholar

KESSELI, R., I. PARAN and R. W. MICHELMORE (1994): Analysis of a detailed genetic linkage map of Lactuca sativa (Lettuce) constructed from RFLP and RAPD markers. Genetics 136: 1435-1446.10.1093/genetics/136.4.1435Search in Google Scholar

LANDER, E. S., P. GREEN, J. ABRAHAMSON, A. BARLOW, M. J. DALY, S. E. LINCOLN and L. NEWBURG (1987) Mapmaker: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1: 174-181.10.1016/0888-7543(87)90010-3Search in Google Scholar

MALIEPAARD, C., F. H. ALSTON, G. VAN ARKEL, L. M. BROWN, E. CHEVREAU, F. DUNEMANN, K. M. EVANS, S. GARDINER, P. GUILFORD, A. W. VAN HEUSDEN, J. JANSE, F. LAURENS, J. R. LYNN, A. G. MANGANARIS, A. P. M. DEN NIJS, N. PERIAM, E. RIKKERINK, P. ROCHE, C. RYDER, S. SANSAVINI, H. SCHMIDT, S. TARTARINI, J. J. VERHAEGH, M. VRIELINK-VAN GINGEL and G. J. KING (1998): Aligning male and female linkage maps of apple (Malus pumila Mill.) using multi-allelic markers. Theoretical and Applied Genetics 97: 60-73.10.1007/s001220050867Open DOISearch in Google Scholar

MARQUES, C. M., J. A. ARAUJO, J. G. FERRIERA, R. WHETTEN, D. M. OMALLEY, B. H. LIU and R. SEDEROFF (1998): AFLP genetic maps of Eucalyptus globulus and E. tereticornis. Theoretical and Applied Genetics 96: 727-737.10.1007/s001220050795Open DOISearch in Google Scholar

MARQUES, C. M., R. P. V. BRONDANI, D. GRATTAPAGLIA and R. SEDEROFF (2002): Conservation and synteny of SSR loci and QTLs for vegetative propagation in four Eucalyptus species. Theoretical and Applied Genetics 105: 474-478.10.1007/s00122-002-0899-z12582553Search in Google Scholar

MYBURG, A. A., D. L. REMINGTON, D. M. O’MALLEY, R. R. SEDEROFF and R. W. WHETTEN (2001): Highthroughput AFLP analysis using infrared dye-labeled primers and an automated DNA sequencer. BioTechniques 30: 348-357.10.2144/01302tt0411233604Search in Google Scholar

MYBURG, A. A., A. R. GRIFFIN, R. R. SEDEROFF and R. W. WHETTEN (2003): Comparative genetic linkage maps of Eucalyptus grandis, Eucalyptus globulus and their F1 hybrid based on a double pseudo-backcross mapping approach. Theoretical and Applied Genetics 107: 1028-1042.10.1007/s00122-003-1347-412838392Search in Google Scholar

PATTERSON, B., C. M. WOLBANG, R. E. VAILLANCOURT and B. M. POTTS (2000): Inheritance of two chlorophyll mutants in Eucalyptus globulus. Silvae Genetica 49: 290-291. Search in Google Scholar

PLOMION, C., N. BAHRMAN, C. DUREL and D. M. O’MALLEY (1995): Genomic mapping in Pinus pinaster (maritime pine) using RAPD and protein markers. Heredity 74: 661-668.10.1038/hdy.1995.90Open DOISearch in Google Scholar

POTTS, B. M. and R. J. E. WILTSHIRE (1997): Eucalypt genetics and genecology, pp 56-91. In: Eucalypt ecology: individuals to ecosystems, edited by WILLIAMS, J., WOINARSKI, J., Cambridge University Press, Cambridge.Search in Google Scholar

POTTS, B. M., P. W. VOLKER, P. A. TILYARD and K. JOYCE (2000): The genetics of hybridisation in the temperate Eucalyptus. pp. 200-210. In: DUNGEY, H. S., DIETERS, M. J., NIKLES, D. G. (eds) Hybrid Breeding and Genetics of Forest Trees, Proceedings of QFRI/CRC-SPF Symposium, Noosa, Queensland, Australia.Search in Google Scholar

POTTS, B. M., R. C. BARBOUR, A. B. HINGSTON and R. E. VAILLANCOURT (2003): Turner Review no. 6, Genetic pollution of native eucalypt gene pools-identifying the risks. Australian Journal of Botany 51: 1-25.10.1071/BT02035Open DOISearch in Google Scholar

POTTS, B. M. and H. S. DUNGEY (2004): Interspecific hybridization of Eucalyptus: key issues for breeders and geneticists. New Forests 27: 115-138.10.1023/A:1025021324564Open DOISearch in Google Scholar

POTTS, B. M., R. E. VAILLANCOURT, G. JORDAN, G. DUTKOWSKI, J. COSTA E SILVA, G. MCKINNON, D. STEANE, P. VOLKER, G. LOPEZ, L. APIOLAZA, Y. LI, C. MARQUES and N. BORRALHO (2004): Exploration of the Eucalyptus globulus gene pool. Plenary paper, pp 46-61. In: BORRALHO, N., PERIERA, J. S., MARQUES, C., COUTINHO, J., MADEIRA, M., TOME, M. (eds) Eucalyptus in a changing world. Proceedings IUFRO Conference. RAIZ, Instituto Investigação de Floresta e Papel, Aveiro, Portugal.Search in Google Scholar

REMINGTON, D. L., R. W. WHETTEN, B. H. LIU and D. M. O’MALLEY (1999): Construction of an AFLP genetic map with nearly complete genome coverage in Pinus taeda. Theoretical and Applied Genetics 98: 1279-1292.10.1007/s00122005119412238515Open DOISearch in Google Scholar

RIESEBERG, L. H., C. R. LINDER and G. J. SEILER (1995): Chromosomal and genic barriers to introgression in Helianthus. Genetics 141: 1163-1171.10.1093/genetics/141.3.116312068388582621Search in Google Scholar

SHEPHERD, M., M. CROSS, M. J. DIETERS and R. HENRY (2003): Genetic maps for Pinus elliottii var. elliottii and P. caribaea var. hondurensis using AFLP and microsatellite markers. Theoretical and Applied Genetics 106: 1409-1419.10.1007/s00122-002-1185-912750783Search in Google Scholar

SEWELL, M. M. and D. B. NEALE (2000): Mapping quantitative traits in forest trees, pp 407-423. In: Molecular biology of woody plants, edited by JAIN, S. M. and10.1007/978-94-017-2311-4_17Search in Google Scholar

MINOCHA, S. C., Volume 1, Kluwer Academic Publishers, The Netherlands. STEANE, D. A., R. E. VAILLANCOURT, J. RUSSELL, W. POWELL and D. MARSHALL and B. M. POTTS (2001): Development and characterisation of microsatellite loci in Eucalyptus globulus (Myrtaceae). Silvae Genetica 50: 89-91.Search in Google Scholar

THAMARUS, K. A., K. GROOM, J. MURRELL, M. BYRNE and G. F. MORAN (2002): A genetic linkage map for Eucalyptus globulus with candidate loci for wood, fibre, and floral traits. Theoretical & Applied Genetics 104: 379-387.10.1007/s00122010071712582710Open DOISearch in Google Scholar

VAILLANCOURT, R. E., B. M. POTTS, A. MANSON, T. ELDRIDGE and J. B. REID (1995): Using RAPDs to detect QTLs in an interspecific F2 hybrid of Eucalyptus. pp 430-433. In: POTTS, B. M., BORRALHO, N. M. G., REID, J. B., CROMER, R. N., TIBBITS, W. N. and RAYMOND, C. A. (eds) Eucalypt plantations: Improving fibre yield and quality. Proceedings papers CRC IUFRO conference, Hobart, Australia.Search in Google Scholar

VAN OOIJEN, J. W. and R. E. VOORRIPS (2001): Joinmap® 3.0, software for the calculation of genetic linkage maps. Plant Research International, Wageningen, the Netherlands.Search in Google Scholar

VERHAEGEN, D. and C. PLOMION (1996): Genetic mapping in Eucalyptus urophylla and Eucalyptus grandis using RAPD markers. Genome 39: 1051-1061.10.1139/g96-13218469954Search in Google Scholar

VOLKER, P. W. (2002): Genetics of Eucalyptus globulus, E. nitens and F1 hybrid. PhD Thesis, University of Tasmania, Australia. VOS, P., R. HOGERS, M. BLEEKER, M. REIJANS, T. VAN DE LEE, M. HORNES, A. FRIJTERS, J. POT, J. PELEMAN, M. KUIPER and M. ZABEAU (1995): AFLP: a new techniqueSearch in Google Scholar

for DNA fingerprinting. Nucleic Acids Research 23: 4407-4414.10.1093/nar/23.21.440775014633073977501463Open DOISearch in Google Scholar

WILLIAMS, E. R. and D. WHITAKER (2001): Outmap© 1.0, a package for genetic mapping, CSIRO forestry and forest products, Canberra, Australia and University of Waikato, Hamilton, New Zealand.Search in Google Scholar

WU, R. L., Y. F. HAN, J. J. HU, J. J. FANG, L. LI, M. L. LI and Z. B. ZENG (2001): An integrated genetic map of Populus deltoides based on amplified fragment length polymorphisms. Theoretical & Applied Genetics 100: 1249-1256.10.1007/s001220051431Search in Google Scholar