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Differential migration-related gene expression and altered cytokine secretion in response to serum starvation in cultured MDA-MB-231 cells


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Serum starvation is often performed as a standard procedure in cancer cell studies to synchronize cell cycle or to avoid unwanted effects of serum components on cellular responses. This method often becomes so established in in vitro experiments that research articles often do not explain the way in which it was performed. It is often assumed that serum-starved cells have decreased basal cellular activity [1]. However, more recently, it has been revealed that serum starvation does not entirely fit the idea of a passive entry into a hypoactive state [2]. Serum starvation has now shifted from being a preparatory method for the experiment to being an experiment in its own right. Until now, the effects of serum starvation on different cancer cell lines have been studied mostly with respect to proliferation, apoptosis, and autophagy [3, 4, 5]. The full effect of serum starvation on cell behavior is unknown, though it has been suggested to induce various responses that may influence the experimental results [2]. Therefore, the clarification of these changes provides new insight into the interfering effects of serum deprivation on the behavior of cancer cells in in vitro condition.

To clarify more details about the role of serum starvation, in the present study, the effect of starvation on cell migration was investigated using breast cancer cells. Furthermore, to address the possible underlying mechanisms, the second objective of this study was designed to find out whether serum starvation can change the translational expression of some key elements of cell migration including β-catenin, twist, Zinc finger E-box binding homeobox 1 (ZEB1), vimentin, fibronectin, intercellular adhesion molecule 1 (ICAM1), and vascular endothelial growth factor (VEGF) in MDA-MB-231 breast cancer cells. These genes are involved in epithelial to mesenchymal transition (EMT). EMT is a physiological process by which epithelial cells lose their adherent junctions and apical–basal cell polarity to form spindle-shaped cells that contribute to their ability to migrate as single cells [6]. Additionally, in the present study, we examined the cytokine secretion of monocyte chemoattractant protein 1 (MCP1), transforming growth factor, beta 1 (TGFβ1), matrix metallopeptidase 9 (MMP9), interleukin 8 (IL8), and nitric oxide (NO) in MDA-MB-231 in response to serum starvation.

Materials and methods
Cell culture

MDA-MB-231 human breast cancer cells were purchased from Pasteur Institute (Tehran, Iran) (NCBI No: C578). The cell line has recently been tested for mycoplasma contamination. Cells were cultured in medium containing Dulbecco’s modified Eagle medium (DMEM) supplemented with 10% fetal bovine serum (FBS) and 1% penicillin–streptomycin (10000 units mL−1) as antibiotics. Cells were incubated at 37°C in a humidified atmosphere of 95% air and 5% CO2.

In vitro starvation

Serum (FBS) was supplemented at 1% for starvation conditions. Cells were washed with phosphate-buffered saline (PBS) before changing to starvation medium. Antibiotics were also used in serum-starved condition. MDA-MB-231 cells underwent serum starvation for 24, 48, and 72 h.

Transwell migration assay

The transwell migration assay was performed as described before [7]. Briefly, 5 × 104 treated cells were suspended in 400 μL medium without serum and plated on the upper side of a polycarbonate membrane of a transwell chamber. The transwells were introduced into 24-well plates and 800 μL of medium containing 10% FBS was added to the lower chamber. After 24 h, cells were fixed and then stained with 4′,6-diamidino-2-phenylindole (DAPI). Four random fields of cells migrating through the membrane were counted on an Olympus IX71 fluorescence microscope.

RNA extraction and real-time PCR

Total RNA was isolated from serum-starved cells, using TriPure isolation Reagent (Roche, Germany), according to the manufacturer’s instructions. The extracted RNA was treated with DNase I enzyme to remove genomic DNA contamination. One microgram of RNA was mixed with one μL OligodT (0.5 μg μL−1) and incubated at 65°C for 5 min for cDNA synthesis. After the process of cooling on ice, each sample was mixed with 4 μL buffer (5×), 2 μL dNTPs (10 mM), 0.5 μL Ribolock, and 1 μL M-MLV-RTase. Then, each sample was incubated at 42°C for 60 min, followed by 70°C for 10 min. cDNA (2 μL) of each sample was mixed with real-time PCR reaction mixture including 10 μL of 2× SYBR Green PCR Mastermix (Takara, Japan) and 1 μL of specific primer pair. The final volume of reaction mixture was 20 μL. Amplification was carried out using 40 cycles of PCR in CFX96 Real-Time PCR Detection System (Bio-Rad), with the following program: denaturation at 95°C for 10 min and 40 cycles of 95°C for 15 s, 60°C for 30 s, and 72°C for 30 s [8]. Sequences of the primers used in this study are represented in Table 1. The housekeeping gene, GAPDH was used to normalize target gene expression. The mRNA comparative expression level of each target gene was calculated by 2−ΔΔCT. Melting curves were used to determine non-specific amplification.

Real-time PCR primer sequences

PrimersSequenceProduct size
β-cateninF: AAAATGGCAGTGCGTTTAG100 bp
R: TTTGAAGGCAGTCTGTCGTA
TwistF: TGCGGAAGATCATCCCCACG137 bp
R: GCTGCAGCTTGCCATCTTGGA
ZEB1F: TGCACTGAGTGTGGAAAAGC237 bp
R: TGGTGATGCTGAAAGAGACG
VimentinF: ACCCGCACCAACGAGAAGGT90 bp
R: ATTCTGCTGCTCCAGGAAGCG
FibronectinF: TCCTTGCTGGTATCATGGCAG74 bp
R: AGACCCAGGCTTCTCATACTTGA
ICAM1F: AGGCCACCCCAGAGGACAAC406 bp
R: CCCATTATGACTGCGGCTGCTA
VEGFF: CCTTGCTGCTCTACCTCCAC280 bp
R: ATCTGCATGGTGATGTTGGA
GAPDHF: AAGGTGAAGGTCGGAGTCAAC102 bp
R: GGGGTCATTGATGGCAACAATA
Enzyme-linked immunosorbent assay

MDA-MB-231 cells were seeded in 96-well plates in serum-starved condition for 24, 48, and 72 h. The medium was collected and the levels of secreted MCP1, TGFβ1, MMP9, and IL8 were determined using immunoassay kits (IBL, Germany) according to the manufacturer’s protocol. The concentration of secreted NO in the medium was also determined using a commercially available enzyme-linked immunosorbent assay (ELISA) kit (Eastbiopharm, China) in accordance with the manufacturer’s instructions. The optical density of each well was determined using a micro-plate reader (Stat Fax 2100, Palm City, FL) at 540 nm.

Statistical analysis

The data were analyzed and visualized using GraphPad Prism version 6.0. The significance of difference between the groups was assessed by one-way analysis of variance (ANOVA) followed by Dunnett’s test. Data are presented as mean ± standard deviation (SD).

Results
Serum starvation suppressed migration in MDA-MB-231 cells

We examined the effect of serum starvation on MDA-MB-231 cell migration using a transwell assay. It was revealed that serum starvation for 24, 48, and 72 h dramatically reduced the number of cells that had migrated through the transwell membrane (P <0.01) (Figure 1).

Figure 1

Serum starvation inhibited cell migration. (A) Cells migrated to the basal side of the membrane were stained and images were captured at a magnification of 100×. (B) Results are presented in graphs as the average number of migrated cells on the underside of the filter. **donates P < 0.01, as compared to the control. Experiments were performed in triplicate wells for each condition and repeated at least twice. The significance of difference between the groups was assessed by one-way ANOVA followed by Dunnett’s test.

The expression of EMT/migration-related genes were downregulated in breast cancer cells under serum starvation

To determine the expression of EMT/migration-related genes during serum starvation for 24, 48, and 72 h, total RNA was extracted from the MDA-MB-231 cells to perform real-time PCR. In the serum-starved group, we found that different genes including β-catenin, twist, ZEB1, vimentin, fibronectin, ICAM1, and VEGF were downregulated compared to the non-serum-starved group (P < 0.05 and P < 0.01) (Figure 2). The expression of ICAM1 decreased more than 50% after 24, 48, and 72 h in serum-starved condition (P < 0.01).

Figure 2

Expression of migration-related genes in MDA-MB-231 cells were downregulated by serum starvation after 24, 48, and 72 h. Relative levels are presented as fold change compared with untreated. * and ** denote P < 0.05 and P < 0.01, respectively, as compared to the control. All experiments were performed in triplicate wells for each condition and repeated at least twice. The significance of difference between the groups was assessed by one-way ANOVA followed by Dunnett’s test.

Serum starvation influenced cytokine release by MDA-MB-231 cells

The concentrations of TGFβ1, MMP9, IL8, and NO in the supernatant of MDA-MB-231, after 24, 48, and 72 h serum starvation are summarized in Figure 3. The secretion of MCP1 was below the detection limit in the control and treated cells at all the studied time points. The mean concentrations of TGFβ1 in the supernatant were 15.16 ± 0.76, 9.43 ± 0.51, and 8.4 ± 0.6 pg mL−1, after 24, 48, and 72 h serum starvation, respectively. They were significantly lower than concentration of TGFβ1 in the supernatant of untreated cells (53.3 ± 0.76 pg mL−1; P < 0.01). The concentrations of MMP9, 48 h (0.06 ± 0.01 pg mL−1), and 72 h (0.07 ± 0.01 pg mL−1) after serum starvation were significantly lower than in control cells (0.08 ± 0.01 pg mL−1; P < 0.05). The IL8 concentration was also significantly lower following 72 h serum starvation (1044.33 ± 9.01 pg mL−1; P < 0.01) compared to control (1307 ± 7.55 pg mL−1). Moreover, our results revealed that the concentration of NO in the supernatant of MDA-MB-231 cells increased significantly after 48 h (132.4 ± 1.51 pg mL−1; P < 0.05) and 72 h (159.16 ± 0.76 pg mL−1; P < 0.01) serum starvation compared to control (82.33 ± 0.76 pg mL−1).

Figure 3

Cytokine release was assessed by ELISA. TGFβ1, MMP9, IL8, and NO concentrations (mean pg/mL ± SD) were measured in the super-natant of MDA-MB-231 cells underwent serum starvation for 24, 48, and 72 h. Significance was set at *P < 0.05 and **P < 0.01. Experiments were performed in triplicate. The significance of difference between the groups was assessed by one-way ANOVA followed by Dunnett’s test.

Discussion

Serum starvation is a basic laboratory procedure which has been proved to be very useful in studying cell characteristics such as cell cycle [9], cell metabolism [10], and cell reprogramming [11]. Notably, serum starvation activates different signaling pathways including phospho-ERK1/2, phospho-ACC, and mTOR pathways and interestingly, these signaling responses are cell type and culture condition-dependent [2]. It has been revealed that serum starvation makes changes in cell response to external stimuli or even completely change the result of an experiment [12, 13, 14, 15]. In an attempt to clarify the behavior of cancer cells in response to serum starvation, we examined the migration potential of breast cancer cells. Additionally, the expression of genes mainly involved in cell migration was examined following serum starvation. Our findings clearly revealed decreased cell migration at different time points of 24, 48, and 72 h. Moreover, decreased expression of β-catenin, twist, ZEB1, vimentin, fibronectin, and ICAM-1 as markers involved in EMT and cell migration were demonstrated. This downregulation showed accordance with the inhibition of migration. These data suggest that decreased expression of the studied EMT/migration-related genes may be at least partly involved in cell migration inhibition following serum starvation. Decreased expression of EMT markers also indicates that following serum starvation, cells underwent mesenchymal to epithelial transition (MET) which is the reverse process for EMT.

In accordance with our findings, Chen et al. showed that synchronization by utilizing transient serum starvation strongly activated the expression of E-cadherin and Epcam in human dermal fibroblasts. Furthermore, serum starvation treatment improved Nanog-positive clones which all imply the role of serum starvation to promote the MET [11]. Similarly, Dong et al. showed that serum starvation caused activation of c-Src in non-small-cell lung cancer A549 cells followed by E-cadherin upregulation [16]. Increased expression of epithelial markers such as E-cadherin is a fundamental event during MET [17]. Rasool et al. observed that the invasiveness of pancreatic adenocarcinoma (Panc-1), and MDA-MB-231 cells through Boyden chamber, sharply attenuated in serum starvation. They also investigated the effect of serum starvation on transcriptional level of EMT/metastasis associated genes including E-cadherin and twist1. They reported a drastic elevation of E-cadherin and reduction in twist1 RNA and protein expression in serum-starved cells, which was in accordance with our results [18]. In contrary to our findings, Ye et al. provided evidence of increased activation of EGFR/JAK3/PLD2-PA system in MDA-MB-231 cells after 2 h and 16 h serum starvation. Activation of these signaling pathways mediates chemotaxis and invasion [19]. Similarly, Nagelkerke et al. showed that 24 h serum starvation increased the migration of MDA-MB-231 cells in a transwell migration assay [20]. This controversy between reported results may be because there is no universal protocol for serum starvation. It may be performed with different concentrations of serum ranging from 0% to 5%. Moreover, the incubation time for serum starvation is also varied in different experiments and could be anytime between 15 min up to several hours, days, or weeks [2]. Such differences in the serum starvation protocol may be the reason for inconsistency between the results of different experiments.

Our results also revealed that incubation of cells under a serum-starved condition led to decreased expression of VEGF. Although VEGF has been recognized as a potent angiogenic factor, it also plays a key role in cell migration [21, 22]. Reports from other laboratories showed that human mesenchymal stromal cells (MSCs) are highly angiogenic under the stress of serum starvation [23]. The reasons for this difference are not immediately apparent but may be due to difference in the studied cell types.

In an effort to identify different players of the cross talk responsible for changes in the behavior of cells following serum starvation, we studied the secretion of cytokines involved in cell migration. Our results for the first time demonstrated that incubation of cells in a serum-free medium for 24, 48, and 72 h led to decreased secretion of TGFβ1, MMP9, and IL8. TGFβ1-induced EMT was shown to promote targeted migration of breast cancer cells [24]. Moreover, it has been suggested that tumor cells produce MMP9, and IL-8 as autocrine growth factors, which promote tumor cell migration and chemotaxis [25, 26]. Here, we showed that changes in cytokine secretion paralleled changes in cell migration. Additionally, the secretion of NO was examined in our study. Our findings represent increased expression of NO in response to 72 h serum starvation. NO induces apoptosis when produced at elevated concentrations [27]. Increased expression of NO in our study may suggest the role of serum starvation as an oxidative stress on MDA-MB-231 cells.

Conclusion

Many researchers are using serum-starved condition to synchronize cells or for chemokine treatment. This study clearly demonstrated that serum starvation results in significant changes in the migration potential of breast cancer cells. Moreover, downregulation of EMT/migration-related genes and altered cytokine secretion showed accordance with the inhibition of migration. It should be noted that, because serum deprivation causes significant changes in transcriptional expression and cytokine secretion leading to changes in cell characteristics, special care seems to be taken when this practice is used in in vitro experiments. Further research is necessary to reach more evidence-based information about role of serum starvation during cell preparations.

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